Array 1 5013-2234 **** Predicted by CRISPRDetect 2.4 *** >NZ_MQTO01000009.1 Arthrobacter sp. ES1 BJQ89_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5012 29 100.0 32 ............................. GGGAAGCGGCGGCGAAAAGTCATCGCACGGAA 4951 29 100.0 32 ............................. CAGGTCATCATCGTCGAGGCGACGACGAACGC 4890 29 69.0 33 TCTC....T..C.CA.........A.... GTCGGAGGGCCTGAGAGGGCCGCGCACTGGCGG A [4875] 4827 29 79.3 32 T.......T....CT.T........G... AGCTGCAGGTGCGGGTTGGTGTCGTCCAGATC 4766 29 75.9 32 .C.C.......C.CA.........G...G GTGAAGCGGGTTGGCGTGAACCTCAACCAGTT 4705 29 93.1 32 .G.C......................... ATCATCCTGACGATGGGCGCGCTGTATGCCCT 4644 28 89.7 32 ............TT-.............. CCGTTCTACGCGGCGCTGCTGCCGCCGACGCA 4584 29 93.1 31 ..........T.............C.... TTCGTGGACTTCCTTGTCTACGCTGGTCTGC GGG [4563] 4521 29 82.8 32 ..T........CTA..........C.... TACTTCACGCATATCTTCGGGAAGCGCATCGT A [4519] 4459 29 86.2 32 .C........T.T...............T CGGAGTCTGGAGATGCAGAGGAAGATCGAGGC 4398 29 75.9 32 .A...A.....AT.T............TT GTCCTCGTCGTTACGCACATCGGCGGCCGCTG 4337 29 93.1 32 A..............T............. AACTTCCGGCACGACCTCGACAGGTCGGTTCC 4276 29 86.2 32 .....G.......AG.........C.... CGCCGAGCACGTACGCTCAGAGAGTCGATGCG 4215 29 86.2 32 ..T.......T.T.T.............. GTGCAGAAAGAAGGCATCTATGCCAACCGCGG 4154 29 82.8 32 .CT........G.AA.............. TGGATGACCTAAGTCCATTCCGGCATTTAGCG 4093 29 75.9 32 CAT........G.AA........A..... TACCAGAACACGATTGCTGGGATTACCGCCAG 4032 29 89.7 32 AC...........C............... TACTGGCTGCCGTATGTGACGGGTGCGTTCGG 3971 28 86.2 32 ........-....A.........TG.... ATGCCGCTGGTGTTCGGTGTCGCCATCGCGTT 3911 29 86.2 32 .C......T.T.A................ ATGAGGTCCAAGGCGTTTGGCGCTATGCTCGA 3850 29 72.4 32 CA....T....G.AA........CA.... AACTGGATCACCTTCTGGGCCGAGGAGGCGTC 3789 28 79.3 32 .CA........AT-.........A..... ACCCGCATCGACCGCAACGTCAAGACCGGATC 3729 29 89.7 32 ...........AAA............... TTCTACGAGTTCGCGTTCCGGGCGACTGAGGG AA [3713] 3666 29 89.7 32 ..T.......T..C............... GTGGACACCTACGTGAATGCGCATGACGTCGA 3605 29 75.9 32 AG....T.T...TA..........G.... CAGACGGTTTACGACTTCCCGACGATCCAGAA 3544 29 89.7 32 ..A....................TG.... AACGACCGAAGCGCCATCCGGTACTCCACGCA 3483 29 86.2 32 .C.........CT...........A.... TGCTATCGTACGGAAAAGTTTGTCTGATCCGA 3422 29 82.8 32 ...C....T.T.T..A............. CAAACCGTGTACGACTTTCCGACGATTCAGAA 3361 29 86.2 32 ...........C.A..........G...A ATCAACTACAAGCAGACAGTGGTCCGCTTAGA 3300 29 82.8 32 CA.........C.A.........T..... GGGTTCCAGGGTCTGGCCGCCGAAATGTTCGA 3239 29 82.8 32 ..G.......T.A..........TC.... ATCACAATCGACACACGGCCGAGCTTGTGGTC 3178 29 93.1 32 ............T.G.............. AGCTGGTACAGCCGGCGCATGGTTGTGCCGTC 3117 29 75.9 32 .AT.....T....A......AT.C..... CGCTCCTCCGAGGTGCTGGTGCGCTACTGGCG 3056 29 96.6 32 ................T............ TGCTACCGTACCGAGAAGCTGCGCTGACCCCA 2995 29 89.7 32 .....G.....C.A............... ATCATCTTGACGATGGGCGCGCTGTATGCCCT 2934 29 100.0 32 ............................. TTCATCGCCAGCAGGTTGAGGGCGCCCATAAT 2873 29 93.1 32 .............AG.............. CAGCCAACATTGTCGTAGGCCCAGATGAAACC 2812 29 89.7 32 ...C.........A..........C.... ATGCCGCTGGTGTTCGGTGGCGCTATCGCATT 2751 29 86.2 32 .C.........CTA............... CAGAGAGGCCATGGCTCCAGCCCGTCAACGCG 2690 29 86.2 32 AG......T....A............... ATCATCCGGGAACTACTCACAGACTGGACAGA 2629 28 93.1 32 ..........-..T............... ATCATCCTGACGATGGGCGAGCTGTATCCCCT T [2616] 2568 29 100.0 32 ............................. CACAGGCCCCACGGCTCAAGCCCGTCAACGCG 2507 29 86.2 32 AGG..........C............... GCGCCAAAATCGGCGGTGACATTGGTGTAGAA G [2485] 2445 29 89.7 32 .............A.T.......T..... AACGCCAACCACGACAAGACAGACCAGTTCGT 2384 29 89.7 32 .C......................G...A AGGGTCCTGAAGACGTATGGTCTGCACGTCGA 2323 29 82.8 32 .G..........T..A....C..A..... AACTTCTTCGACGCTTTGACCAAGGATCCGAG 2262 29 79.3 0 ............TA..T.....G..G..A | ========== ====== ====== ====== ============================= ================================= ================== 46 29 86.5 32 GTCTTCCCCGCTCGCGCGGGGGTGTTTCC # Left flank : TCGCCGAACACGCCCGCAGGTTCGCCAGGGCCGGTGGGGTCGTGATCAACGCCGACGAACTCACTGATCCGTGTGCGGACCTGGAAACGCTGATGCGGCTGACCGGCCACGACGTCGACGAGGAGACGGCGACCCGGCTTATCGAAATGCCCAGCGTGACTGTCCTTGTCGTTGATCCGGACGGCCAGGGTGGGGCGCCGGGGGCCTGGGCTGGGTCTATTTCTGAGCTGGAAGCAGTCCGGGGCGATGACCGCCCCGCGCTGCGGCGGGCCATGGAGGCGACCGTGCCGTTGAACGGGAAGCTGGCCCGCCAGGCACTGGCTGTCGGGACCCAGTGGAGTCCGCGTTCGCAGGTGCTGGCCGGGATGATCCCGGTGGTCCTGGGGCAGGCCGGTATTGGCTACGACCCGCTGCTCGGGCTCGTCGCCCAAGGTGCTGGGGGCGCGAGTGCCGGGGCAAACCAGCCAGTAAGCACTGGGTAAACCCGCAGGTCAACTAGG # Right flank : CAGAGGAGCCGACTCGGGAGGCAGGGACCCAACCGTGACTAGGGCCCTAGGATGGCACTGTGAGAGCAAGACAGGAGCTTTACAAATTCGTCTGCGAAGAGGGCCAGAGGGCTGTCGATGACCAACTGTCTGAGTTGGATTCAATGCGGCAACGGTCCGTCCAGTTCCTCACGTTCACCGGGGCCGCAACGGCGTTTTTAGTAGGAACAAGTCTCAAGACGCCTTCGAGGACGGTGCCGTTTTACGTCCTCGCGTCTACGGCGACCGTGTTGACGGTGGTTTCCGTCGTTCTGTGCCTGTCTATCTTGATGGCCTCAAAGAAGATCACTTCCCCGAAACCGCAAGCGTGGCGTTTCCGAATGTCACCAACGGGCCTCGTCAAAGTGATCGAGTCGGACGACCCTCCTCGTCGTGATTCCGACTTCTACAGGTGGCTGGCCGTGGAATACGACGCGATGCTGTGTTTGAACGACCCAATCCTGAGTCAACTCCGCAGACGG # Questionable array : NO Score: 4.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.33, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.12, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCTCGCGCGGGGGTGTTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCGCCCGCGCGGGGGTGTTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.20,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [39-56] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //