Array 1 3211106-3211928 **** Predicted by CRISPRDetect 2.4 *** >NC_019952.1 Mycobacterium canettii CIPT 140070017, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 3211106 36 100.0 35 .................................... ATGGTGTCGGCCATGTCCGCGCCTGCCCGCTTCCC 3211177 36 100.0 35 .................................... GCGGCGGCGGCCAAGGCGCCGATAAGGGCTTCCCG 3211248 36 97.2 35 ................A................... GAGTATCACGACATCACCACGCAGCCGTTTGGTGT 3211319 36 100.0 36 .................................... GCGCAAATCGACACCACCATCGACTTTACTGCTCTT 3211391 36 100.0 36 .................................... GGGCGTGATCCAGCTTCCGGGCTACGCGTTCGACGG 3211463 36 100.0 35 .................................... GAGTATCACGACATCACCACGCAGCCGTTTGGTGT 3211534 36 100.0 36 .................................... GCGACCTGTTCAGCGGTCATCCCGACATTCTCCGCC 3211606 36 100.0 35 .................................... GTTGGTTTCTCCGCGAAATTCCATGTACTGCCCTA 3211677 36 97.2 35 .................G.................. GTGAGGAGCCCAGCCCGGACTTCACCGGTGAGGGA 3211748 36 100.0 36 .................................... ATGCTTGATCCCGTTGTGGAGATCATAGATTTCGGT 3211820 36 100.0 37 .................................... CTGCGGAAGATATCATCGACGCCCGCAACGATTTAGC 3211893 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 12 36 99.5 36 GCCTCAATGGTGTCCGGCCAAAATGACCGGATTAAT # Left flank : GGCGCGCTTCTCCAGCGGTGTTGAGGTTCTCGACCACTGGCTGCGCCGGGTCGCGCCCGTCGCGGCTGCCGCCGGCACGGCCGCTACGTGGGTGCTCTGTCGGGGCGGGCGGGTAGTTGGGTTCTACGCGCTCGCCATGGGGAGCATCGAGCGGATGCTGGTGCCATCGCGGCTGGGCCGGGGCCAACCCGACCCGGTCCCGGTGCTCGTCCTCGCTCGCCTGGCGCTCGACCGGCAGGAGCAGGGCACGGTCTCGGTGGCGATCTTCTCCTCGATGCCCTCATCCGATCCGTGGCCGGCGCCCGGCAGTATGGCGCCCGCGCCCTGGTCGTGGACGCCCTCGACGACCGCGCCGCCGAGTTCTACGGTCACCACGGCTTCTTGCCCCTCGAGGGTCGACGCCTCTACCGGCGGATCAGCGACATCGAGCGGGCGCTGGGACTATGACGCGCTATCGTCGCTGGGCGACGTATGCAAGACCATGCCACAAAGGCTTACCT # Right flank : TATGAGGCCAGCGATCAGCATGGTTACTAGCCCGGATTTTTCGTGAAACGTTGTGAGTTTCGGGGTGTCGATATGCGAAAGTGCCTGTCCTGCAAGGAAGAATTGGACTTCTCTACGGTTCAATGATCCTGACGGGAAGGCACTTCGCAGGTGAAGAATATCGCGGTCGGGTCGCGGGTGAAAGTCTCCGCCGACGGTTATGGTGTCGTGTCGCATGCCGGGATGGCCATGGTGCGTGAGCTCGCTGACCGGAGCGGGTTGTCGGCGCAGGTCACCGCCGCGTTGGCAGATACCTACCGTGGCCCGTGGGTGTATGCGCCCGGTGAGGTGTTCGCCGATCTGGCTGTCGCGGTCGCCGATGGGGCGGACTGCATCGACGCGGTCGGACAACTGTGCGGCGACCGTGAGCATGTCCTGGGTGCCAAAGCCTCCACGACCACGATGTGGCGGCTGATCGATGAGCGGATCGATGCTGGGCACCTACCGCGGGTGCGTGCCGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGGTGTCCGGCCAAAATGACCGGATTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 3213663-3214771 **** Predicted by CRISPRDetect 2.4 *** >NC_019952.1 Mycobacterium canettii CIPT 140070017, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 3213663 36 100.0 36 .................................... CCGCCGCGCCGGCACCGTCCGCATCCGCCGCGCCTG 3213735 36 100.0 35 .................................... GCACTCTACCGGCTCGGTGACATCGCATCCTACGA 3213806 36 100.0 36 .................................... CGATCTCGCGCACTGAGCGGTCGCGCCTGTACCTCT 3213878 36 100.0 36 .................................... ATGCCGCCTACTTCTGTTACCCGCGTCAGTCCACGG 3213950 36 100.0 35 .................................... ATTTCTAATCCAACAAGTGTTTGTTCACATTCACA 3214021 36 100.0 35 .................................... ATGATGTGTGGTGCTGTATGGTGCCGTGTTCCCCG 3214092 36 100.0 35 .................................... TTGCATCATCGCCTGGATGTGTCAGCGATGATGTA 3214163 36 100.0 36 .................................... ACGCTACGCCCAGGCAGGCGCGTCACCTGGCAATTG 3214235 36 100.0 36 .................................... GCTGACGACGCGCGGGAGGTTTCTGCTGCCTGCTGT 3214307 36 100.0 35 .................................... GCTCAAGGGGATCTGCTCATCGTGCCGGCGGAGTT 3214378 36 100.0 36 .................................... ATGCATACGCGCGGTGAGTCGAACCGTGGGGTAAAC 3214450 36 100.0 35 .................................... TTTGTTACCGACACGATCTCACCCACGCGGTACTT 3214521 36 100.0 37 .................................... ATGTCCGCCACCGGCATGGACACTGAGCGTGCGATTT 3214594 36 100.0 35 .................................... GATTCCACGCCGAGCGCATCGGCATTAGTTTGCAA 3214665 36 100.0 35 .................................... GGTACGAGGCACGCAACGCCCCCGGCTCCCTGTCT 3214736 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 16 36 100.0 36 GCCTCAATGGTGTCCGGCCAAAATGACCGGATTAAT # Left flank : CGCCCGCATCGAGGACCGCATCCGCGAACTCAAAGCCACCGGCCTGCGCAACCTGCCGTGTCACGCATTCGACGCCAACGCCGCCTGGCTGGAGATCGTTCTGGCCGCAGCCGATCTGGTCACCTGGTGCCGGCTCATCGGATTCACCGGCCACCCCGGCCTGACCCGCGCCGAAATCAACACCTTCCGCTACCGAGTCCTGCACGTCGCAGCCCGCATCACCCGCGGCGCCCGTCGAACCCGACTACGCATCGACGCCACCTGGCGATGGGCCGCAGCCATCGCTACCGCATGGCAACGCGTCCGCACCGCCTTCGGTTAACCGACAGCCCATCTGACCGACCGAGCACGAAAGACCCACTGGCCCTGGGAAAGCCCGCCAACCCGGCGACACGGGACAACCCCAGCACGCCCTGAACCACACAAACCCGAATCACGACACATCCCATCGCCGAGTTCGACCGACATCACCCTCGACGAAAAATTGAGGCTAGCTGCCC # Right flank : TGGCTCGACGAATTTTGGGCCTTTGACCTGGCATAAGACACACAACCGCGAGCGGTGATGATTCGAGCATCCACGCTGCGTTTGGCACTCATACGCGGTATCCACCGCGACGTAGCTGACCTGGTCGCGAGCGCTGCCCCTGATCTGACCACTCATATGACCGCTCGCGGCTTCATACGATCTGCGGTCCGTCTGCAGGCATGCGGCGGCCGCGACCGATCTGTCGTATTGCAGCGGGTGAGAACGTTGGGCCAAGGTCGATTCGTACGACACTGTCGTGAACGAGGTGCATCACGGCGGTGACCGCGGCTTCAAGTTCCGATAGCTCAGCAACACTGAGGTCGCACAGAAATACCGAATATTGCAATCGCTCACCATGGTCCTCCATCAGGGTGCACACACGACGCAGACGTTTCGGGTCGGCGATGTCGTATGCCATCAGATAACGGCGCCGCGTCATCTCGTCACCATCGGCACATACTCGGGCAGTTCACCCACTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGGTGTCCGGCCAAAATGACCGGATTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //