Array 1 24718-23324 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFKI010000010.1 Actinobacillus porcinus strain NM319, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 24717 37 100.0 36 ..................................... AGAATACCATTCTAGCTAATTGTAAAGGCTCAAACT 24644 37 100.0 35 ..................................... TGCTCAACCGCATCAGATAAGATCTGAAATATTTT 24572 37 100.0 36 ..................................... GGATTTTTTCCGCTCGCATTTGTAAAAACGTTTTTT 24499 37 100.0 34 ..................................... ACCGTAACCATTGAAATATACATTATCCCCCCAA 24428 37 100.0 37 ..................................... GTTATCAAGTTTGCGATTTTGATGTTTATCTCCATCT 24354 37 100.0 35 ..................................... GTTAGCTCGGATCTTGACTCCTCCGTTGTAAAAAC 24282 37 100.0 34 ..................................... TTTATGCTCCTATTTGTAGTTAAACCATCAAAGC 24211 37 100.0 35 ..................................... GCCATATACGATCCAACGTAAACGCCCACGCTCCG 24139 37 100.0 33 ..................................... TATCTCTGTTTTTGACTCATCTGTTGTGAAGAT 24069 37 100.0 34 ..................................... GTCCCCCGCGTAACTACTGTATTCGTTCCATAGC 23998 37 100.0 34 ..................................... GCTTCAAATTGAATATATTGCTTATCGTTCATAG 23927 37 100.0 36 ..................................... AGCATTCAGGCTGCGGATTTTTTCGGCGCGCATTTG 23854 37 100.0 36 ..................................... AGATGAAGTCAAACCGGTTACAAAAAACATTAAGCC 23781 37 100.0 33 ..................................... ATATGGTCTAAAAATTGGGCATTAAGGTGGATT 23711 37 100.0 33 ..................................... CCTTTTTTCTTCGCGCAGTTGTAAAAATGTTTT 23641 37 100.0 32 ..................................... CCATAATAAACGCGTGACCTGTACTCACACCA 23572 37 100.0 34 ..................................... TCATCTAACGTTCCGTTGTCGCTCTCTTGGCAGT 23501 37 100.0 32 ..................................... GGTGAAAGCCCACACACCCAAGCAAGCTAACA 23432 37 100.0 35 ..................................... ACTCTTCACGTTTTTTATATTCACTTTGTGTTGAT 23360 37 94.6 0 ...................CT................ | ========== ====== ====== ====== ===================================== ===================================== ================== 20 37 99.7 34 GTCGAAAGACCTTGCCCTGTATCAAAGGGATTGAAAC # Left flank : GTTGAGTAATTATGAATTTTATTTTTAGGAGGCATTATGCATTTTTTAGTAGGTTATGATATTAGTGATGAAAAACGGTTGCAAAGAATTCACAAGGTAATGGCTAAGCACGCTACGCCTATTCAATACAGTATTTTTTTATTTGAGGGGGAGCGTAAGGGATTACAAGCCTGTATTGATGATGTAATGCGTTTTTTTCATAAAAAAGAGGATGATTTGCGTGTTTATCCGCTTCCTTCCAATGGTAAGCAATGGCAGCTAGGGAAAGCGGTTTTGCCCGAAGGGGTTATTTGGACAGCGTTGCCGTTAAATACGCAGGTTGTCTAATTACGCTCGAAAAGTGCGGTGTTTTTTGTTAAAATATCGCTGTTTTTGACAAGTGGAAGGAATAAAGTTGATGATTTTTCAATCAATTCAACAGCTAACTCTTCGGCTTCTCAGAAATTTTGGGAAGCCGTTGTTTAACTTATTGAAATGTAAGAAAAATAATCCCTTCCGCA # Right flank : GTTGAATACTAGATGAGATTGAACCAACAGTATTAGTCGAAAGACCTAAACTACATTATTGGTGATCGAGTCCATTAAAACTAATATGCCAAAATAACGCCCAAAGAAAGTCGTATCCATAACAAGGTGTAATAGACAAATTTGTTTACAGCCTTATTTGTTTAGCGTTTATCCAGGCGCTGAGTGCGGTCATTTTGACCGCACTTTTCATTCCCCAATTTACCCCAATCTTTGACGCACAATTTCAAACAAACACACCCCTGTTGCTACGGAGACGTTTAATGATGACACGGAGCCGGCCATTGGGATGCTGATTAATTGATCGCAACATTCGCGGGTTAAGCGGCGCATACCGTCACCTTCCGCGCCCATGACCAACGCTAGCGCACCGGTGAGTTTGGTTTGGTAAATGGTTTCGGTGGCTTCGCCTGCGGTTCCCACTACCCAAATATTATGGCTTTGCTGAATATCACGTAATGTACGAGCCAAATTAGTAACGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAAGACCTTGCCCTGTATCAAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.30,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //