Array 1 154333-151497 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAORA010000004.1 Candidatus Chlorobium masyuteum strain BLA1 NODE_4_length_199455_cov_226.867399, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 154332 28 100.0 33 ............................ TACTTTCGTGCAGCATATCTGCAGTCCGCTGGA 154271 28 100.0 33 ............................ TAGACAGCGTTGCCGGGGCAGTTCTTGCATGGA 154210 28 100.0 33 ............................ TGATTCAGGTCGCAGTGCTGAACGGCCTGACCG 154149 28 100.0 33 ............................ CAGGGTGAGATGTCAAAGCGATTTACAGAGACC 154088 28 100.0 33 ............................ TTGCGGATCGCTTCGCACACTGACTTTCCGTGT 154027 28 100.0 33 ............................ CGTCAGCAAATTTGCACAGCTTTCTTGTCTCAG 153966 28 100.0 33 ............................ TTATTTTTGATTGATGCTTTTTGTAGTCACTCT 153905 28 100.0 33 ............................ TTGGAGTTGGTTCTACGCCAAAATCTGGTGTTG 153844 28 100.0 33 ............................ TAAATCAAGGACAAAGAGAATAAGAAAGCCGGT 153783 28 100.0 33 ............................ TTTGAGACTATGAGTGATACGGACAGAGAGGAG 153722 28 100.0 33 ............................ CGCCGCCGGTAAGGTGCTGAGCGCAAAGCTTTC 153661 28 100.0 33 ............................ CCACTTGGCTCAATGCGATACTCGGAACAAACC 153600 28 100.0 33 ............................ CAGGAGCGTGGATGAGACTTTTTAAAAGGAAAG 153539 28 100.0 33 ............................ CTTGTCGGCCCTGAAGGGGCTTATGGCACAGGC 153478 28 100.0 33 ............................ TGAGTCCTTTCCGTTATGATTGATTGATACATT 153417 28 100.0 33 ............................ CATTACTATCCTGAGCCTCCTCTCCATCCGGCT 153356 28 100.0 33 ............................ TAAAGCAGACCGCCGTCCGTCGTGATATAATCT 153295 28 100.0 33 ............................ TTGTGTGGTGAGAAATTTGCCGGTTTTTTGCCG 153234 28 100.0 33 ............................ CTTGTCGATCCATCTTCCGATCCACCGGAGGAA 153173 28 100.0 34 ............................ CAGATAGTAGTTTGGGCCAGATTCAGTATTGAGA 153111 28 100.0 33 ............................ TGGCACTGAAACCTCTGTCTTTATGAGCCCACC 153050 28 100.0 33 ............................ CGTTGATAAACTGGCTTGCAATGCCAAGGAAGA 152989 28 100.0 33 ............................ TCAAAGAGTGGGATTATGAGTACTTGATGCAGC 152928 28 100.0 33 ............................ TACGTCACTCAGCTTGTCCAGGGTAATGGGGGT 152867 28 100.0 33 ............................ CTACTAATCACTCATTTTCGAGAGTTCCTAGCA 152806 28 100.0 33 ............................ TACGTTGAACGATGAGTGGTGATTGGATTGACA 152745 28 100.0 33 ............................ TTGAAGGAGCGCACGTCACTTTGCAGGCCGAAT 152684 28 100.0 33 ............................ TGACGTCACGCTTGAGCACGCCGAGAGCGGAGG 152623 28 100.0 33 ............................ TACTTGCCCGTAATCGTGGTTTTTGCAGCGTAA 152562 28 100.0 33 ............................ TTTCGCATGAGTGTTGATTGCCCGGATGCTTTC 152501 28 100.0 33 ............................ CATTGAGGAGGACGCGGTTGTTGATTTAAAAGG 152440 28 100.0 33 ............................ TGCCCTGATGTGAAGGATTCCATCGCGACAAAG 152379 28 100.0 33 ............................ TCCATTCAAGCACAGCGAAAAAGGAGTCATTGT 152318 28 100.0 33 ............................ CAGGCAGGACTTGACACAAACTATAAGCAGTAT 152257 28 100.0 33 ............................ TAAAAAAGCCCCTCATCGCTGAAGGGTTGAAAA 152196 28 100.0 33 ............................ TGACTATGGCCCAGAGCATCATATGGGGCTTAA 152135 28 100.0 33 ............................ ATCGTCAGGTTGGAATGCCGAACATTCGTAATT 152074 28 100.0 33 ............................ CAGTCCGGACACCCCGGAGCCATCGAGCCCAAA 152013 28 100.0 33 ............................ CTGAGCGAGCCCAGCGTCTGCGGCATGGATTTT 151952 28 100.0 33 ............................ TCAATGTTTCGTTGTATTGCATCGCACAATACA 151891 28 100.0 33 ............................ TAGTTGATTGCTCAAATACAGTGAGTTCGGTTT 151830 28 100.0 33 ............................ ACGCAAATGACAATAACAGTAGAGTCTTTTCGA 151769 28 100.0 33 ............................ TTAACCGAGGGAACTACGCCGAGGATTTTCCGT 151708 28 100.0 33 ............................ CAGATAAATGTTTTGGTTGAAGCAGTTGAGAAG 151647 28 100.0 33 ............................ CTGACCGGAGCAATCACCATCCCGGCAGCACCC 151586 28 100.0 34 ............................ CATTCGATCACATTTCTTGTCTCTCCAGAGGTAA 151524 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 47 28 100.0 33 GTCTTCCCCATGTGCGTGGGGGTGTTTC # Left flank : AAGAGGAACTTTCAATTGATCTTGCTTTTTCATTGACAGTTAACATGGCCGGTTCCTATGACCGCCATAAGACCGCTACAGAGTTCCGTCGAAGAGTGATTGATATGGACCTGCTTGCTTGTATCGGGCCGGATATTGAAGAAATGCTCGGGAAGCAATAATGCTGGTTGTAATTGCCAATGATCTGCCGCCCGCAGTGCGCGGACGAATGAAACTTTGGTTTGTAGAACCACGTGCTAACATGTTTGTTTCAGGTATCAAAGACTCTGTGGCAAAAAAAGTTATAGATTATTTGCACAAATACTGCCCACCTGAATCCGGATTGATGATTTTCAATAGCAGCAACACTCCGCCCGGATATGAAATTTATGGACTTGGTGACACTCGCAGAGATGTGATTGAGTTATCCGGGATGCCGTTGGTGATTGAAAAGAGTTTTGTGCCTGTTATTCAGCCTAAAAAAACTCCCGGAGAAACCTGAAGGTCCAGTGAAATCCAGT # Right flank : CCAAGTATATTTTTGAGTGCTATCCATTCGTGGGGGATTAAGGGACGTAAGTGACAGAGGTAATTAATAATCCAATTTCTGTTTTTTCAAAAGGATCAGTTATTGGCTGTGAACTCATAATGGGGTGTAAGCTATCCCAGGAGGCGCGAGTCTGGATGCACCGGGGCCGCTCTTTTATTTGCACAGTCATGCCCTGCTTTGGGCGCGTGGATTGAAACCCCTTGCAGAGAGTGTGAGGGTTGCGGAATGCGCTCTACTAACTTCTTTGAGTCTACAGAGCTTGGGAACCATGTTCCCGGCAATCAATTTCAGTTTTCCTGTTTTTGTCGGCAACCTCTACTGATGTATATTTTCACGAATAGCAGATATGCAGAGGTATTGAGTGGTTTTGGTGCAGAGCTGTAATAAACTCAATATGGTCAGGGGATTAATATGTATGCAGAGCGATTGATATTGGAGACTGATCTATCGGGTAACCTGAAAAAAATGAACAAGTTGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCATGTGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.40,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //