Array 1 59881-62494 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYZH01000008.1 Levilactobacillus senmaizukei DSM 21775 = NBRC 103853 strain DSM 21775 Scaffold8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 59881 36 100.0 30 .................................... AATATTTGGGTCTAAGTAACCGAGTCCGTA 59947 36 100.0 30 .................................... TACCCAGACGCTATACGTGGCCACAGTCAC 60013 36 100.0 30 .................................... GGTAATTTCGGAAACAAGGAAGGCAAAGCT 60079 36 100.0 30 .................................... CCGGTCGGGGATAACGTCGCCGTTCACTTG 60145 36 100.0 30 .................................... TTTCGGCGTTGGCTACTCCCATTCGGTTAA 60211 36 100.0 30 .................................... TAACTATCGCCAGAAGCTCTTGCAGCTTGT 60277 36 100.0 30 .................................... AAAACTATTAAGATACCCAGTTCTTACTGT 60343 36 100.0 30 .................................... TAAGAATGAACAAATTCGTTCAGCATTCGC 60409 36 100.0 30 .................................... TCGTTGGAGGTATCTTTAGCTGGATTTCTC 60475 36 100.0 30 .................................... TTGAAATAGAACGGATGCTAACCGAAGCCC 60541 36 100.0 30 .................................... TACCAGTCATGGTACCGGCGTTAAGCAACC 60607 36 100.0 30 .................................... TGTTTGTACTTGCTGTCATTGCGGGCGCGT 60673 36 100.0 30 .................................... CTAAGTACCGCACTCACGTTGTTAAGTCTG 60739 36 100.0 30 .................................... GGCTGATGGAGCCTCAACCACAGTCGTAAT 60805 36 100.0 30 .................................... TAAGGATGTAGGTGCTTTACCTCACTTTGC 60871 36 100.0 30 .................................... AGCGGCAATATCGGAATTGTCGTTATCACC 60937 36 100.0 30 .................................... AGCTGATGGAGCCTCAACCACAGTCGTAAT 61003 36 100.0 31 .................................... TAAAGGTATGTAGCAAAATTTAAAGAAACTT 61070 36 100.0 30 .................................... CGAGTCGCGAGGACTTGATCAGAAAATATA 61136 36 97.2 30 ................G................... CCAAAACATAATCAAATTTAGTTTCAGGTT 61202 36 100.0 30 .................................... AGAATGAAGAGAAGAAACCTAGTGTTGATG 61268 36 100.0 31 .................................... CAAAGGTATGTAGCAAAATTTAAAGAAACTT 61335 36 100.0 30 .................................... CGTCCACGGCGCAGCCAGGAAGCCGCCGCA 61401 36 100.0 30 .................................... GAAGTCGCGAGGACTTGATCAGAAAATATA 61467 36 97.2 30 ................G................... CCAAAACATAATCAAATTTAGTTTCAGGTT 61533 36 100.0 30 .................................... AGAATGAAGAGAAGAAACCTAGTGTTGATG 61599 36 100.0 30 .................................... CAGGTTAAGGCCGAGGCAATGCAGGCCATC 61665 36 100.0 30 .................................... TCGGGCAACGACAGCGTTACAACTTCATCT 61731 36 97.2 30 ........C........................... CAGGTTAAGGCCGAGGCAATGCAGGCCATC 61797 36 100.0 30 .................................... TCGGGCAACGACAGCGTTACAACTTCATCT 61863 36 97.2 31 ........C........................... CCATGGGTATTACAGTTCACCTTTCTACATA 61930 36 100.0 30 .................................... TTAAGAGATGACATTGGAATCAGTAAGGAG 61996 36 100.0 30 .................................... ACCGACAATGTGAATGATGGAGCGTTAGCT 62062 36 100.0 30 .................................... CAATGTCACCCGGTATCGTGACAAGGGGTT 62128 36 100.0 30 .................................... ATGAGTTTAGTCATGCTTGGAAGTAGGCGA 62194 36 100.0 30 .................................... TATGCTTCTCCTCAGTCGATTCAGCCACAG 62260 36 100.0 30 .................................... AAGACATCTTTATATCGCGTCTCCTTATCC 62326 36 100.0 30 .................................... AACAAATGCCATTCATTGACGATCCTGACA 62392 36 100.0 30 .................................... AAGAGGTCTGGCAAGCAGATTCTTCAGCTG 62458 36 86.1 0 ..............G.....T.....C.....TC.. | T [62492] ========== ====== ====== ====== ==================================== =============================== ================== 40 36 99.4 30 GTTTTAGTTCAGTGACAAATCAATAGAGTTAAGAAC # Left flank : ACGGTAGATTTGAATGGTTTGTTTCAACGTAAGCTTCAAGCCCAACTCGAAAAACTTGTGGATGATGCGCAAGTTGTTAAAATATCCGATGACATTCGGGCTTTGATGACGGAGGTATTGAGTGCGAGTTATATGATGGATGTCCCATTGGAGTTACCTGAGATTCCAGAACTGAAGAAGTTAATCAAGTTTAGTGGAATTCAGTTGTCACCAGAGGTTGGTAATGATGCCTATGGTATAATTGAGGCACTGATTAAGGTCGTCATTGAACTCGGCGACCATCGAATGATTGTTTTAACAAACGTTAGTCATTATCTCAGTGTCAACCAGCTGCAATCACTGGTGCGATTGATGGCTACGGTAGATTTGCCATTACTTCTAATCGAATTTTCAGATAGTCATCGAGTTGAGTATTTCCAGGGATGTGAGTATCACTACATTGATAGGGACTTCGTCCTCTGGTAGGTATATAACAATGAGATTGTCGTGTGGAAATAACG # Right flank : CTAGTGTTTCCCAATATGACGATCAAACAGGGGAGAAGCAAATTGAAAAAAGACAATGACAATTACCATGGTGCCTTCGAGGGAGACCATTTCGGTTGTTTCGCGTTTCTAGTAGTGGGCACCGTTGCCATTATTGCCGCCGTACTATGGTTCGGCATGGTGACTTATTAGTCAGATCAAAGCACTAGGCAGTTTACATAAACGGTAATCCAAGGAAGCTATTCTCACGACTAGCTTCCTTTTGTTTCCCCTCACCAATGCCAGTTACAATTAGACAGATAACTTACAATTTCATCATTTGAAGGATCATCGCGTAAAGGACCGATAATAGCCAAAGATCCAGGAGGTCAAATACGGAGGTGATCGTGATGGAAATATTGAAAGCTATCAGTGCAACGTTTTCCAATGCAGCAATCATGAGTTCAATTACGTCTACGATCTTTATTATTCTGTTAGGTTTCTTCTTGCGGCGCAAAGGGATTCTGGGCGATAATGTTGGT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTTCAGTGACAAATCAATAGAGTTAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //