Array 1 1151661-1151448 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP087959.1 Lactobacillus gasseri strain Lg1199 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1151660 29 96.6 33 ............................C ATCCCTCTTGGAGTAGCAGCCTTTAAAGCTTCA 1151598 29 100.0 32 ............................. TGGGAAAATGGGAAAAGCTATCCTGATCTTGA 1151537 29 96.6 32 ........T.................... CAAAAAGAAGCAGAAGTAGTGAAATTGAAAGA 1151476 29 89.7 0 ..............G......G.....G. | ========== ====== ====== ====== ============================= ================================= ================== 4 29 95.7 33 GTATTCTCCACGTATGTGGAGATGATCCT # Left flank : CCATTAGCTGAGAAAAAAGATACAATTTTGCAGGTGTTGAATGGATTACATGATAATGCTGTAATGCCAAAGATTAAGTCTTTAGGATTGTCTACGCCTTTAGGCTTTATGCAATTTTCTTCGGGAGTACCGCTATCTGAGAATGCAAAATTAATTTATCAATCTCCGACAGGGCTATTTGAAAAACGCGTTAAGATTTCAGATTTGTAAAGAAAATAGGGAACCACCAATGTGATTCCCTATTTTTTGCATAAAAAAAGTCCCTCGATAGCTCGGGACAAGTATTGAAACTTTGCATCAAAAGATGCATTGCTTGATTTTAAATCTGGTTGTTAGATCAATAAAGTTTAGTGTTGGGAGCTACCCAACAAATTAATAGTATCATGTATAGGTAAAAGATACAAGGAGGAAATGTATGGGATGGCGATCGGTAATAATTACGCAACATGCTAAATTAACGTATTCAATGAATATGATGATTGTGCAGACAAAAGATGGGA # Right flank : GGTAAAAAACCATTGATTAACGGTACTGTTGAATTTTCTCTCCGCCAGGGGAGCCACCAAAAAAAGGATGTTTCTATACACCGGAAACATCATTTTTAAAGTACACTTATTTACCAATCAATTGTTGAAAATCGCTAACCAATTTTTGGAAAGTTGCATTCAAATTTTGCATAAATTCATTCTGATTATTTTTCATTTGATTTAGCAAAGAATCAGCTTGATTAGGATTTTGTTTGATCTGATCAATCGTAGAGCCCAATTGATCAATTTGATTTTGCAAGGCTTGATTATTAACTGCATTATTTTTCAATTGTTGATTTTCATTCTTAATTTGATCTAATTGATTCTGCAATTCTTCTTTATTTTGATCTTGTTTATAATTATTGATCGCACTCTGCAACTCTTTGTTTTGTTGCATTAGTTGTTTATTTTGCTCAGACAAATTATCCAACTTGCTGTTAGTATTATTAAGTGCGTTGCTTTGAGCTTGTTCATTTTGA # Questionable array : NO Score: 3.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGATGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.50,-10.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //