Array 1 35905-36993 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQZD01000029.1 Propionispora hippei DSM 15287, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 35905 29 100.0 38 ............................. TTTGAGTATGGCGGTAATTCTACCAGCACGGGCTTTGG 35972 29 100.0 38 ............................. TCGGGATGTTAAAGAAGTGCAGGATGATGCCTTGCTAA 36039 29 100.0 36 ............................. TACCCTAGCCTAAAGTTCAAGGGCTGCCTGGTCACA 36104 29 100.0 36 ............................. TTTGCAACTTGCTTAGAGACAGTTCGCTCCCCTTTC 36169 29 100.0 37 ............................. TACCGGCTGAACGCCTACGAATCCGAAACGGTAAACG 36235 29 100.0 37 ............................. TTCCTACCTGCCCCTACACTCTATACGGTGCCGGTTG 36301 29 100.0 37 ............................. TTTCGACTTCCGAGTCATTTTGGAAAACTATACCAAC 36367 29 100.0 38 ............................. TTCAATTCCTCCCTAAATTAAAGTTTCACGCCGGCCGC 36434 29 100.0 35 ............................. TAGTTACCCCCTCCTGTAATGGCCCCGCCAATCGC 36498 29 100.0 37 ............................. CAATCTATAGGGGTGTTATTGTGAAAAAAGCAAGAAT 36564 29 100.0 37 ............................. CCTTAGTGCAATTCCTTTAGTTCCCGGCGATTATCCG 36630 29 100.0 38 ............................. CAAGCCTGCAGCAATCTACACGACCAGCTCTTTACCGA 36697 29 100.0 38 ............................. CACTTCTAAGCTGTTCTTCCTAAAGTGACGCTGGTCAT 36764 29 100.0 39 ............................. CTTTCCACGGTATACGCTTTTCGCATGAGCAGAAAAACG 36832 29 100.0 37 ............................. CTTTCGGGCATGACCAGTCCGACTTGCCATACATGGC 36898 29 100.0 39 ............................. CGTTAAACAAGGTGTATCATTAACGAATGCACTAAAATT 36966 28 75.9 0 ...T.-............G.A..A..G.G | ========== ====== ====== ====== ============================= ======================================= ================== 17 29 98.6 37 GTTGATAGACTACCTATAAGGATTTGAAA # Left flank : TTGATTGATCCGGTATTTCGCAATACATTGTTGCATGCCGTGGATAAGAAAGAAATCATGACCTGTTTAAACCAAGTGTGAAGAAAATTTTAAAAGTCATCCTTTTTATTCAGTTGGGAGCAGGCTGTGAACCTGCTTCTTTACCGTTTGTGTGCAGTTAAATGTTTTCCTCTCCAGGGAGGTTGGAACGAAATTGCCAAACCGCTGATATACTCCATTTATAGGCCGGATGGTCAAATTCCATTGGTTGCACTTTCCCTGATATACTGATATATTTAAGAAGAAATAGAAAAATTGGGCGAGATCCCACCTTTGCTTATTTGTCGTCGATCCCCAATAGCGTAAAAATACCGGGAGATCGACGACAAATAGATTGTTAGGTTTGAAGCGGATATGATAAGTCTTTGCCGTATGTTTGATGAATCAGAATGGTTAGTTCGTTATAGGGCTTCTTTCTGGTTGAAATTGAATAATGCCTTGAATTTATTGGTCTTTGATGG # Right flank : GGCTATCTGATGGCTTCATGGATGATTTGGTAGATCAATCATAAAGCCCCACTCGAACCGGTGAGGTTAAATTATTTCGTTTTCAAGTACATAAATAACCTACTTATTCAGTTGAGAGCAGGCCGAGAACCTGCCTTTTTTACATTATAAAAAGAGTTTAAAAGGAAGTCATGATCTACATTAGAGATTGGTTTATATAAAAACTTATTTTTAAAGAATTTCAGCATAAATTGTAAATTTATAGAAAAGTGCAAGAGGAAATGGGAATATATGGTCGAAATACGAGAGGAGAGATGTATTATATCTCTCCTCTCGTACTTTTACGCCCTTTTAGGTAGGATAGATCTGCTGTAAGATGAAATATATCACATATATTTCAAATCCTTGTAGGTATGAAATGTAAAGAAAAACTAAGTTCTGGGAATAAGTAAATAGATTCTGCAGAAAGGTTAAAATATATTTCATATTAAACCTCGCTTTTAGTGATTAGTTTCATTGCT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATAGACTACCTATAAGGATTTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 45932-46231 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQZD01000029.1 Propionispora hippei DSM 15287, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 45932 30 100.0 37 .............................. TGCTTGCTCGACGCAACGATACGCCAACCTTCGAAAC 45999 30 100.0 39 .............................. TCGCCATAAGCAACGTATACCTCACCCCCAACCACACAC 46068 30 100.0 36 .............................. ATCCTTTATCCAAGGTTAAAAACGTGCCTAAGAAGG 46134 30 100.0 38 .............................. AATTCTATCTGTAACGATAAAAGGATGCTTGGAGATAG 46202 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 5 30 100.0 38 GTTGATAGACTACCTATAAGGATTTGAAAT # Left flank : GATGGAACTGGATAAAATCCTCGTTGACGATGAGGATTCGGTGATTATCTATACGTTGCGTACTACCCATTACTCTAAACGGGAAATTATGGGACTGCGCAAAGGCGGGCAGGATTTGATTATTTGAATAGTAGTTGTTGTTGGGAGATGTCAATAGGGTATATGATGTGTTAGCTTTGGTGGAACCGCAGAACGGCAAATGCTTTAAGTAAGAAATGGGACTCTGCCAGAAATAAAAGTATAACTGTGATTGATTTTTATTCGGTGACCTGCCATTTTTATGGCAGGATTTTTTTCGTTAATTATGGAATACAGAAAAAATTATAAAATATATTTCATGCAATGAACACAATGATTTTGTCGTCGACCGGTAATAGCGTAAAAATACCGGGAGATCGACGACAAAATAAATGGCGGTCGAACTGGATTTAAGGAAGAATTGAAAAACTTGCTTATTTGGGCTGATTTTTTTACAACTAGAGTTTTCGCAGGCTAAATGG # Right flank : CCGG # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATAGACTACCTATAAGGATTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //