Array 1 1270236-1268549 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032680.1 Lactobacillus johnsonii strain ZLJ010 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1270235 36 100.0 30 .................................... GAAAGAAAGGCAATGGCATTGAAAAATATG 1270169 36 100.0 30 .................................... CTATTCAAGGAGATAGTTCTCGAGCTTATC 1270103 36 100.0 30 .................................... TTTTTCACTCCCTGTTTATTTACTGTGTAA 1270037 36 100.0 30 .................................... TCAAAGTGTACTCTTTCACGTCTCTTATGT 1269971 36 100.0 30 .................................... GCTAAGTTTTGAACAGTTTTCATTAATCCA 1269905 36 100.0 30 .................................... CCTTCTATAACATTTTAGATACTATGAAGG 1269839 36 100.0 30 .................................... AACTTCTTTTAACCTTGATTCCACTTCTTG 1269773 36 100.0 30 .................................... TACGTTTTATACGCTCTTCACGATTTCCAA 1269707 36 100.0 30 .................................... ACCTCCTACGTTTTTTTATCTAATTCCATT 1269641 36 100.0 30 .................................... TTAATTCCATTAGTTTAATTTCCTTTCATA 1269575 36 100.0 30 .................................... TAGAGAGCCGCACCAGTGTCGTCATCTTGT 1269509 36 100.0 30 .................................... AATCTTTCTTAGCATTCTTTTGAGCGATTG 1269443 36 100.0 30 .................................... TGTAAGTGGTGATCTACCACAATACGGACA 1269377 36 100.0 30 .................................... TATCTAAGTTGGGCTAAGGCGTGGGGACTT 1269311 36 100.0 30 .................................... TCCGCAATCATAACAGTAGGGTATGAACTT 1269245 36 100.0 30 .................................... GCTGATATGGATACGTAGGGCTTTTCTGGC 1269179 36 100.0 30 .................................... AAAAAAAGAGTAACTAAAGAGATCGGAGTG 1269113 36 100.0 30 .................................... TTCGTAACAATCCGTCACATCCGTCACACA 1269047 36 100.0 30 .................................... ACTTTCTATATATATAATACCATACTTATG 1268981 36 100.0 30 .................................... AAGAGCAAAAACTATGGCCAAACATTCCGT 1268915 36 100.0 30 .................................... AAACGGTATTCACTAGATAAAATGCTGGCA 1268849 36 100.0 30 .................................... ATGCTATCTAATAAGTAAGCATCAATTGCT 1268783 36 100.0 30 .................................... TTGATCATTATTTAGATACTGACGCAGATG 1268717 36 100.0 30 .................................... CTCTTGATGAGTTTAAAAAGTATGGACAAT 1268651 36 100.0 30 .................................... CTGCATCCCTTAATGGAGTTTGGATATGAT 1268585 36 80.6 0 .........................T...ACTCT.T | A [1268555] ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.3 30 GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC # Left flank : CTAAAAATATTTTAGATAAATATATGCTTCTGATTGTAAAAAAATATATCGAAAATTTAGATGAAGATAATCGAAATAAGATAATAAAAGCATATTATAATTTAGAATCTTTAGTTCAGGATTCATTATTTTTAGAAGATTTACCGCTAGAACTTGATTTTAGTGAGGATTTAAAGAAGTTTCTAAAATTAGAGAATTTGCATTTAGATTCTAAGTTTTTAAAAGAGCCCTATGCTATAATTGAATCGATCTTAAGAATCCATCAAACATGTAATTTGAAGACTGTGCCAGTTGTTTGTAATGTCGCTCATTATTTAGATAGTACACAGTTAAACATGTTGAACAATTTGCTAAAGTCAATGAAATTGAAAATGATTTTAATAGAATTCACATCTAAGGATATTCTGGTTTATCCGAAAGATGCTGATTATTTCTACATTGATCAGGACCTTGTTGATTGGTACTGACAGCTATCATTAAAAGATAATTATAAATTGTCG # Right flank : ATAAAGGTCATTAGTATTAATTAAAAATATTGATATTAATGACTTTTTGCTTTGTTGAATTTGGGGATCTTATCTAAATTACCATTTTCTTTTACCTTTAAGAAATTAAAATATTCTTCAGAGAACTTAACGTCTGTTAACCAGACTATGTTTTCGTTTCTTTTGGTTTTATTTTTGGTCAAAAGACACACCTTCAATAATTTAACTATTATTAATTAAAATCTCTGGTTTTAAAAGGACAATAGAACAGAAAAATGAGAAATCTAAGATTTAAAAAGGATGATTTTCTATTCATTAGAACAACATATCCTAGTTTGTTTATTAAATTTAAGAACAGTTATGAAGAAAATGGAATTGTTAATGTTCCTATGCAAAATGAAAGGGATTATGATTATTACTTTGATATAGTTGGGGATTATATAGCTACCTCATTGAATGAAGTGGGGGAATTAAATGAGGATGGTCTAAGACTTGAGGCTGCGTGGGATTATGCAGATTGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //