Array 1 32583-30277 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPA010000105.1 Trichocoleus sp. FACHB-591 contig105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================================ ================== 32582 35 100.0 46 ................................... CATTTTTTAGGTAATCCGCGTCTTTGATGTCCTCAGGGTAGAAACG 32501 35 100.0 40 ................................... CATTTGCGATCGCGGCGGCGGCAGGAAGTTTAGTGTCTCG 32426 35 97.1 39 ..T................................ CGAGGTGGCGGAATTCACACTTGAGTGAAACCTGACGGG 32352 35 100.0 36 ................................... CAGCGATCGCACTTCCGCAACCCTTAGGCGCAGCAG 32281 35 94.3 40 .....C....T........................ CTTAAGCTGGGACTTTAGCAAGCTGGACAAATGTGGTGGC 32206 34 94.3 43 .....C.........-................... TAAAAAACCCTCCGAGTTCGGGGGTTAGCGTGGCATGATTTAC 32129 35 100.0 40 ................................... GAGGTCGGACAAGCGGCGGAAGTCGGGTTATGTTGGTAGC 32054 35 94.3 38 ........T..C....................... TAAACTTCCGGTTCAGCCGGAGGAATATTTACTGGTTC 31981 35 94.3 43 .....C..................C.......... CGTGAAATCCATCAGCTCTTTACTCATGTTGGTGCGCTCGCTC 31903 35 91.4 35 ...........A.....C.T............... TGAACCATTTGGGCTGCGGTATTGGCATCGACAAG 31833 35 91.4 38 .....C.....A..A.................... TCGTAAATATCTTGGTAGGGTTCACTTGATTCATCACC 31760 35 94.3 40 .....C.....A....................... TGTGATTTAGGGACATAGATATAAACTCGCCCTCGGTAAC 31685 35 94.3 35 .....C............................T AGGAGAACTGCTCTTGAATTAGGTTGGATAGCAAC 31615 35 82.9 39 CT...C....TA..A.................... TAATCCTGTGTGCCAGCCGCGAACGCTTCGACGTTGGGT 31541 32 82.9 46 .T.....---.GA...................... TTCCCTTTAACTACTACACTTGCTAAGTCTTTCCCGTTACCTGGAT 31463 35 91.4 41 .....C.....A........T.............. ATGAGTTGAGTGCCTGTACCGCTCGGCCACACGCCCTTGAA 31387 35 97.1 39 .....C............................. TTTAATTTGCCGTGAACAATGATGTCTGATAATAATAAC T [31385] 31312 35 91.4 48 ...................T...A.C......... CCCCTGCGTTAAATGTTATCGCTGCCATGACCTGTACACTCCGTCTGG 31229 35 97.1 41 ...................T............... TAGGGAAACCTTTGTCTGCTAGGTACTGAGATCGCCAGTAG 31153 35 94.3 40 ...................T...........C... ACCCCAGTTTCAGCGATTCCGGCAAGCATAGTCATGGTAG 31078 35 77.1 45 CTTT.C..T.T....................C... GTTATGTCCTTGCGGAACATATTCTCCGCGATCGCACCCTCACAG 30998 35 94.3 39 .....C.........................C... GTTTTGATTGATTGACTACACTTCCTATCGTACTAAGCG 30924 35 85.7 48 ......G....A...A...T.........A..... TCCTGATAGTTCCCTCGCTTATGTTTGTTGACTCCGTAACCGCTTAGG 30841 34 88.6 36 .............A.....T-.........A.... CTTTCTAAGTAATTTTCCACGTATTCCTTAAACAGA 30771 34 80.0 28 ...................A..TG...G..-..TT TCTTAAAATCTAAGACAGCGTATTCTTG AGG [30750] Deletion [30710] 30706 35 91.4 47 ...T....T..........T............... TTGAAATTGACTGAAGAAGTCTAGAAGGCCAACTGCCCAGTTGGGGG 30624 34 91.4 43 .....C-............T............... TTGCCAAGGTCAGCAAATGCGTCTACCACTGAATCGTCATTTC 30547 35 94.3 41 ...............................G..G ATTTTAGATAAATATCGGGATCTGCTTTCATCTCATGCAGG 30471 35 91.4 42 .....C.......A.....T............... TCACTGCTCACGGTCGGCTCCTGCTCTCTGCGCCACAGTCTG 30394 35 91.4 48 .....C.............T..............T GTTCATTTTATTTGCTCAGATAAGTTGCGATCGCTAAATTACTTAAAG 30311 35 94.3 0 .....C.............T............... | ========== ====== ====== ====== =================================== ================================================ ================== 31 35 92.3 41 TCCCCACTCGCTGGGGAAACCAATTGAATGGAAAC # Left flank : TCGCCGGAGCAGCAACGGTTAGAACGAGAGGGACAGTTATCTTTAATAGCGGTGACAGTACGCTTTTTCCCACCTGTTACAGCCTTTATTTTGGAGGGGGAGCAGCGGCACCCCCAGCAGACGATTCACAAGGGCAAGGGAGCCCAGGGGGAGGTGACACATGTAGACTATACGATCAAGTTGCCGGAGCGATCGCTTGATGAGTTTGTCCGCTGGGTGAACCGTTTTATGCAGTACGCTCAGGTACTGACACCCCAAGAACTTGTGGAGAAACACCAAGCAGCAGCTCAACAGTTGTTGTCACGATATGGCTAGGGTAGTTGCAAGGAATGGAAAAAATGGCTAGGATGACGCTAATTGGTGGAAACCCTCGATGTATTGCTGTGATTGGCTTTGAGAGATTTTTATCTCAATCTAGTTTGATAATAGAAAGCCCAAAAACTGATCCCTCGCAATCACCTTCTAGACAGCAGGCGTATCAAGGTCTTCAATAGAGGGGG # Right flank : GCAAAGTTGTCTCCGTTTTGTACTTAGCTTTCAATCCTGCCAGAGCAATTCTTTGTTCTGGTAGGATTACTCCCGCTTCTTTACGACCACTTTAGTTTCGTTGATATTGTTTCTTACGGTTTTGAGAAAAGTAGGAATAGCTTTGGATAGAGCCTTTTCTGAGCGAGTTGGTTGTTCTGACTCTGGCAACGCTGTTAGCTCCTCTAACACCGCCTCAATTTTGCCTAAAAGCTTTAGCTTTTGAAAAATAGGATCTGAGTTCCTATTTTTTTCCTCGGTAATGTCCTGTCGTTGGTCACTCAGTACTTTACGGACGTAGCGGGTCGAAACTCCGATCGCAACAGCTAAGGCAGGCCCAAGAGCTTTTTCTCCTTCTTTAGGCCGCCCTCGTACCTCTCGATAATTCAAGCTGCGTAAGCGTTCAGCTAAACGTTCAATTTGGTCACGGGTATAGTTCACCCGCTTTTCATTTTCAGCAAGCTCGACTTGTAATGCTCGCT # Questionable array : NO Score: 5.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.18, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCCCACTCGCTGGGGAAACCAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.80,-2.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [37-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 44718-45941 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPA010000105.1 Trichocoleus sp. FACHB-591 contig105, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================= ================== 44718 36 100.0 38 .................................... GCGAGTTACTGTCTCTACAACTTGGCTTCATTCATTGA 44792 36 100.0 50 .................................... GTGCATTTCTTGAACTCTTATGCTCATACGGTGACATGACTCTTTGACAA 44878 36 100.0 40 .................................... TCAATTTATCGAATCGCTCTCCTTCCGGATCTGCGACCGT 44954 36 100.0 51 .................................... TGTGTTTCACGACGAAGCGACAGTTTGTCTGACCTTCGTTTAGCTCGTTTA 45041 36 100.0 39 .................................... TGCGTGAAGGCATCACCATGTAATAGAACCACTGGTAGT 45116 36 100.0 36 .................................... GTAGCGAAACAAAACTCATATTTCAACTCCTCTAAA 45188 36 100.0 65 .................................... TAGAGCGGACCTGTCCATCCAGATATTCCTCTTCTGGCCGCTGCATGAACGTAAACAGGCTAATA 45289 36 100.0 41 .................................... TGGCCTATCCGTTAAACCGTACCATTGTCCTCTATATAAGA 45366 36 100.0 40 .................................... CCAAGATCGATAAATTCAGGATCGCCTAGTTCTTTATATC 45442 36 100.0 35 .................................... GGCTGGTTGCCATAGAGATCGCCTGCCCACTCTGA 45513 36 100.0 46 .................................... AAAATTCATACTCATAGCCATCAATCCAAATGCGATCGCCAGGTTT 45595 36 100.0 38 .................................... TCAACGCCTCTGCCAGTAACGCATCAAAGCGATCGCTG 45669 36 100.0 39 .................................... CGAATACATGTCGCTGCCAGCGGGGAATTCTTGGGTGCA 45744 36 100.0 48 .................................... GACTCTGACTCAATGCCGTTGGATAGCTTAGGCATTGGACAGTACCCC 45828 36 100.0 42 .................................... TTGCCTTTTTAGCTCTGCGCCTACTACGCCATAATGCCGAGG 45906 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================================================= ================== 16 36 100.0 43 GTCCCTACTCGCTAGGGAAATCAATTGAATGGAAAC # Left flank : GTACCATTTACCAACCTTACCTGATCCGCTAGAGCGCTTATGCTGCTTTACCTCGTCACCTATGATATTTCCTGTGACAAGCGGCGCAAGAAGGTGTCAGATTTGTTGGAGGGGTATGGGCGACGTGTACAATACAGCGTTTTTGAGTGCGTATTAGCTAAAAGCAAGTACGATGAACTCCGCCAGCGCTTGAAGCAGCGAGTCAACTTAACAGAAGATAGTGTCAGGTTTTACCCTTTGTCAGGGCATACAGTGTCGCAAGTGGAAATTTGGGGTGAACCTCCTGTGACCTCAGTACCGGGCTCGGTGATTGTTTAGCTGTGCGAGGGATCGGAAAAATGTCTCAAATGGCGCAAGCTCATAAAAACCCTCGATGCTACGCCTGTCAAGAAGTTCAGGCTTCTCAAGGTTGGGGTATTGGTGTTCAGACTCATCTAAATTTTGATCCCTCGCGATCGCCCGCTAGACAGCAAGCTAGCTATAGGTTTCAATAGGGGTAG # Right flank : CTCGATTTCTGGCTGAGGTGGTCGGTTCCTGTGTTCCTCAGAGCTTACGGCCCGTGATTTGAACTTCCCATCCCTGCTTCTGTAGTAACAGTCGCTTTTGTTCAACTTCCTGGAGCAGCAGGGCGGCAGCCATCTCGGATAGACAAGCTTCGAGCACGACAGCTGCAGCCTCAGCCCAGGCCGGTAGCGTCTTTGTGTTCATCGAAAGATAATCCCAGTGAGCCAGAATAAAAGCACTCAGCGGCAACACCAACCAGTGATATAGACCCACCCAGGCTGGTTAACCAAAGCGATGCAACCCAAAGCGGTGTTTCGCTGTCTTGAACCAGCCTTCGATCTGCCAACGATGCCGCCCATCGTGCTGGCTTTGAGAGGCTTGGTGGAGAGCACATAGCGCTTCAAGCGTGGCTTGCCCTTTTCACGCTTGAGGTAGAACCAAGCTACTATGACCAGGAAATCGAGCCCTTGGAGTCGGACCTGTTGACCTGGCTTATGCAGAT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCTACTCGCTAGGGAAATCAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //