Array 1 9966-9762 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBMT010000049.1 Pseudoalteromonas arctica strain NEC-BIFX-2020_0012 NODE_49_length_17944_cov_64.648221, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ==================================== ================== 9965 24 91.7 36 .....T.........T........ TAAAATCCTCGGTCAAGTTATATTGGCGCAAAGTAG 9905 24 100.0 36 ........................ AGTTGTGAAATCGCGTGGTCTTACTCATTAAAGTAA 9845 24 100.0 36 ........................ GTCGGAATTATTGCATGATGAGACTCTTTTTCGTAA 9785 24 95.8 0 .....................G.. | ========== ====== ====== ====== ======================== ==================================== ================== 4 24 96.9 36 CCTGCCGTATAGGCAGCTGAAAAT # Left flank : GCTTTTTTAAATTAAGCCAAGTTTTAGCTGTGCCTGAAAACTGCCAAGAAATACGTTTTATACGTAATCAGGCAGTAGCAAAAATATTTACAGGTGAAAGCAGAAGGAGGTTAAAGCGCCTGCAAAAAAGAGCGTTAGCAAGGGGGGAAGATTTTAATCCTAAAAAGCTCGTAGCTCCAAGAGAGGTTGATATTTTTCATAGGGTAGCCATGACTAGCAAGAGCTCACAAGAGGATTATATTCTTCATATTCAAAAGCAAAATGCCGACTGCCAAGCAGAGCCAGTCTTTAGTAATTATGGTTTTTCATCAAATGAAAAGTTTAAAGGCACGGTTCCTGATTTATCACCGTTTATAGAAAGCAATTAACCTTTATTTTTGTCACAATTATAAGTTATTGATATTAATGCGATATAAGCAAGCATTTTAAAAATGGGTAAAATTGAATTTGCTTTTTAATTATATGAATTATATAAATAAATTTAGCTATTTTGATAGTAG # Right flank : AAAAACAATCGATTCGATGTTTAAGTTAATGTAATTCTGCCGAAAAGGCAGTTGCTAGCAATATAAAACCAGCCTTTTATTTGAGGGCTGGCATTTTATTTTTGCTTTAATAAGTAGATTTATATTTAAGGTTATTCACTCTGTTTTTAGGAGAGTATTAAGTTTCCTAATTAATAACGGTGGGCTAACATCCTATGAAAAAGTAAAGCATACTTGCCCCGCAATGAGTTGGATAGTAAAGTAGAAAAATAAAGGCCAAAATAAAAAAACCAAGAAAACTTGGGTTTTATTTCCCCATAAAATGGGGGACGAAATTATAATAACTTAAAAAACTTAGGTCTAAGTTAATCACCTGGTTTGTGATCATGTGGTTTTAAAGGCTTATGTTTATTTGGTGTGTTAGTACGTTGTCTTTTATCCGGCGTTCCATCATCATTTTCTCTTTTCGGTCCTGGTTTAATGAACATATGCATACCTTTTGTAATGGTTTAAGTTGTTTA # Questionable array : NO Score: 2.71 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTGCCGTATAGGCAGCTGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 116970-123372 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBMT010000003.1 Pseudoalteromonas arctica strain NEC-BIFX-2020_0012 NODE_3_length_203889_cov_54.740089, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 116970 32 100.0 33 ................................ TGGGCCGTATCGCCGATAATATACGAATATTTC 117035 32 100.0 34 ................................ TGTAAATTCCTTACCAGGTGAATTATCCATAATG 117101 32 100.0 34 ................................ TCTAAACCGTCGTCAGGGTCCGTATAGTTACGTG 117167 32 100.0 33 ................................ CCTGAAATGCCGTGTATCATTTTTTAGCTCCCC 117232 32 100.0 33 ................................ CCTAGAATGGGTAATGTAAAGTCCGTATTATCA 117297 32 100.0 33 ................................ ACGCTTGTTGTACGAGAAATTATAAGCGTCTGT 117362 32 100.0 34 ................................ AACCTTGCGCCATGTTATGTCGTCTATGTGCTTT 117428 32 100.0 34 ................................ AACAGTAGATACCCAAACGCTTTTCCCAGTAGTG 117494 32 100.0 33 ................................ CTGTTATTTACGGTGACATGTTCAACCAGAGAC 117559 32 100.0 33 ................................ TTAGCAGAATGTGAAGGGCTTCAAAGTGACTTC 117624 32 100.0 33 ................................ ATGGAATTGTGATAACCATGAAAACCTTTATCT 117689 32 100.0 33 ................................ AATGCTTCCACCTAAATCAGGTGTAGGCTCAGA 117754 32 100.0 34 ................................ TTGTCGTCCCCTTCACCTGTGGCGTTCATACCTT 117820 32 100.0 34 ................................ TTTAACCACACATAATGCGTGCCCGCTTTGTTAC 117886 32 100.0 34 ................................ CAGAGAGCTGCCTATAACAACGCCGCTAAACAAT 117952 32 100.0 34 ................................ CTTGGAATTTAACTGAACCCCTCTCTATACGTAT 118018 32 100.0 35 ................................ GAAGATCTTCGAACGAGTACAAGAAAATAGCGATA 118085 32 100.0 34 ................................ GATAACTGGCTTTTCATCTAACGCGTCTTCGGGT 118151 32 100.0 32 ................................ TCACTTAGTGTTCGCATAGCCTCTTCGACAAT 118215 32 100.0 34 ................................ AAGAGTTAATGCTTTACATTACGGGTAACGCGAA 118281 32 100.0 33 ................................ TAAGAATCTAAATGTCAACATTTATAAGATTAT 118346 32 100.0 34 ................................ GAAAGAAGAACCCTGGGTGTAAATTATTTGCGCT 118412 32 100.0 33 ................................ CAAGAACATCAAATCGACGTGGGTAGTGAAGGT 118477 32 100.0 34 ................................ CAAGTTGCTTCTAAAGTCGCATCGGCTGCAAACG 118543 32 100.0 33 ................................ CTCTCAGCATGAGGAAGGGCATAAGCTCTGGCA 118608 32 100.0 34 ................................ GTTTCACTAGTAGGTATACAAAAAACCAAGAATG 118674 32 100.0 34 ................................ AAGCTTCGCAGCGAATCGACGCGAGTGTGCAGCA 118740 32 100.0 34 ................................ GTGAAACGCACGACCTTCTAACATTGATTCACTG 118806 32 100.0 33 ................................ TACTTCAGTTAAGTCAATCATTTTATACACTCT 118871 32 100.0 34 ................................ TTTTTTTGAAAAAGGGCGTTGGCCGCCATAGTTA 118937 32 100.0 34 ................................ CCAAATACCAGTAAAGCCATTTTCATAAGCTGAC 119003 32 100.0 33 ................................ TGAATAAACGATCGGCTTTTGAATAACTAAAAC 119068 32 100.0 34 ................................ TTCGAGCGTTTGCGTAGTTGGGGTAAGTGTGCCG 119134 32 100.0 34 ................................ GGGTCACCTGGGTTTATTTCAAATATGGGTTTGG 119200 32 100.0 33 ................................ CTCAACACCTTTAATAAACTGAGCGCACACAGC 119265 32 100.0 34 ................................ CGTCCATCGAGTTTTTAAATTGCCACGGTGTTGG 119331 32 100.0 33 ................................ TTTAAAGTGGGTATCACCAACAATATTAAAAGG 119396 32 100.0 34 ................................ GGTAAATCCGGTTTAGTTGGATCGGCAGCAACGG 119462 32 100.0 34 ................................ AGTATGCCCAGCTAGCTCAAATCGACTGCACTTT 119528 32 100.0 33 ................................ ATCGTAAAAATATGACTCCTATTTTTATTGAAT 119593 32 100.0 33 ................................ ATTTGATGACCACAACCAAGCATACCCGATTGG 119658 32 100.0 34 ................................ TATAAAACACTCACTATTATTATCAGTATGTATG 119724 32 100.0 33 ................................ TTCGAACTCTACGTCCATACGTGCGATTTCAAC 119789 32 100.0 34 ................................ TCTTTAACTTCGTCTGTTAACGTCACCGGTGGTG 119855 32 100.0 34 ................................ TCGATCCTTTAAAGATAAAGACCGTTTACAAATT 119921 32 100.0 34 ................................ ATTGACGGCCAACAAACCGCAATTGAAGAATACA 119987 32 100.0 34 ................................ GGTAAAGGCTCACGCCATAAACGCTTAAAAGCGT 120053 32 100.0 34 ................................ ACGCTAAGAGAGTTATAGACGGCGAGATACTAAT 120119 32 100.0 33 ................................ GCCCCCATAGTTATGAAATTCACCATCAACAAC 120184 32 100.0 33 ................................ ATCACCATCGCAGTCTTTACCAGTTGCAGTAAA 120249 32 100.0 34 ................................ TATCATAGTCATATAAGTTAAAAGAATACTGTAT 120315 32 100.0 34 ................................ TTTCAAGTCAGCAATTTGTTTTCGAGTTAATTGC 120381 32 100.0 34 ................................ AACACGGTGTTATTGAAGATAACCAACAAGAATA 120447 32 100.0 33 ................................ TGGCTGAGGTTTAGCACACATCAAAGATCCTCC 120512 32 100.0 32 ................................ GGCTGAGGTTTAGCACACATCAAAGATCCTCC 120576 32 100.0 34 ................................ GCCATAAACCTCACAGAAAACATCAACGTTTAAA 120642 32 100.0 33 ................................ ATATTGTAAGTAGTGCTCTTTTTTTGAGAATGG 120707 32 100.0 33 ................................ TATTAAATCACGGCAATAGTCACCATAGACTGC 120772 32 100.0 34 ................................ CCTTGTAAGCAAGTGCAACGCCAACGATTAAAAC 120838 32 100.0 34 ................................ ACCTATGCAATAAAAAGATTTATACATTAATGCA 120904 32 100.0 33 ................................ TGTGATAGTTGGTATTATGTGTCGTACAACCGC 120969 32 100.0 34 ................................ ATCAATTAAAACCAATGCGCCCGTTGGCATCCAG 121035 32 100.0 34 ................................ TACGCTCTTAGGTTCAAAGCCACATTTTTGAATA 121101 32 100.0 34 ................................ AAACCATGTTGCGCTAGCTGACTTAAAAGAACCT 121167 32 100.0 34 ................................ CCACCAATAAAGCCAAGTTCACCTTTAATGCCAT 121233 32 100.0 33 ................................ AGATAACAGCTCTCGATATCGGGGGCGCTTTTA 121298 32 100.0 34 ................................ CTCTCAGCATGAGGAAGGGCATAAGCTCTGGCAG 121364 32 100.0 34 ................................ TAGTCATATGTCACCAGTGACGTGTAGTTAATTA 121430 32 100.0 33 ................................ TCTGTCCGTTGCGGGTTGTATATTCACAGTGTG 121495 32 100.0 34 ................................ TTAACCGCTGGTGATGCTGGCGACTTGGTTAAAA 121561 32 100.0 34 ................................ TCCAAGTATTAGTCCTAAGACCTCCTATTTCTAG 121627 32 100.0 33 ................................ TCACTTGATGAGTTACGTAAAACCGCACAATTG 121692 32 100.0 34 ................................ TAGCGATGCGTGTCGCTGGTATCGATGTGAATAC 121758 32 100.0 34 ................................ TGTTACACCTAAAGTAGATATCTTAGTGAAATGA 121824 32 100.0 34 ................................ TACGTCACCAGACAACACAGTAAGTGCGTCACTT 121890 32 100.0 34 ................................ TTGTCGTCCCCTTCACCTGTGGCGTTCATACCTT 121956 32 100.0 33 ................................ AAACCATGTTGCGCTAGCTGACTTAAAAGAACC 122021 32 100.0 34 ................................ TGTTGTAATAGGGAATTGCTGCGAGTCCGTCAAA 122087 32 100.0 33 ................................ TGGGCAATCAGGGTCCTCTACATCCTCAAGAGG 122152 32 100.0 34 ................................ ATAATATCGTGAACTGTCAAGTTATTAATTCACA 122218 32 100.0 35 ................................ GCTTTAAGAAACTAGGTACATCATCATCAAAAAAA 122285 32 100.0 34 ................................ AAGTAAGGCCAAACCATCATCTTGGCCTTTTTTT 122351 32 100.0 34 ................................ TGAACCGTCATATTTAAAAATGATAGTAGTTTTA 122417 32 100.0 33 ................................ ACGTTAGGCATTTTCTTTAACATGCTGTGTAAT 122482 32 100.0 34 ................................ AATTTTATTGAAACCTAGTGCGTATTCTTCGATG 122548 32 100.0 33 ................................ CTGATTTTGGTCCTTGGGCTGATTGCAAAATCT 122613 32 100.0 35 ................................ TGTTCCAAGGCCATCCCAGTTGCATAACTGCACCA 122680 32 100.0 34 ................................ TTAAACTCGGTCAAAGACTAAGTGAAGAAATACA 122746 32 100.0 34 ................................ ATCTTACATTCGTTTACCAAGACTACTAACGGAG 122812 32 100.0 34 ................................ AGAAATATCAACTTGGGGTAGGTTTTCAACGGAA 122878 32 100.0 34 ................................ TGTCGTTAATAGCGTCAATAGCGTTTCGGAATGC 122944 32 100.0 33 ................................ AACAACTGAAGCAGCGGGTGAACAGGCATGGTC 123009 32 100.0 34 ................................ ATGGCGTTTTAGGTCTGCGGTAAAACACACGATA 123075 32 100.0 34 ................................ ATGGATGCTCATCATATGCCAGCCTGCGCCCTTG 123141 32 100.0 33 ................................ CTAATTTCGTACGCAACGGAATTAGGCCGCACC 123206 32 100.0 34 ................................ AAACCCCGGTATGCTCCAGCCATCAATTGCTAAG 123272 32 100.0 34 ................................ TTTTTACCGGCGGCTGCTTCTGCATTAAATGCCA 123338 32 90.6 0 ............A...........G......T | GTG [123358] ========== ====== ====== ====== ================================ =================================== ================== 98 32 99.9 34 GTCGCGCCTCACGCAGGCGCGTGGATTGAAAC # Left flank : AAATACATTTATAAGGAAATAGCACCATGATGATATTAGTAACTTATGATGTTTCTTTTGAAAATGAAGGAGGGCAGAGACGACTACGTAATTTGGCAAAAGTGTGCTTAGATTATGGTATGCGAGTTCAATATTCTGTTTTTGAATGTGAGGTTGATTCAACACAATGGCTGATTTTTAAAGAAAAGCTACTTTCAATATACGATCCTGATGTTGATAGCCTAAGGTTTTATAAATTAGGTAAAAATTGGCAAAGTAAAGTTGAGCATCATGGTGCAAAAGTCGCCATAGATATTTTTAGAGACACATTAATTTTATAAACTCGCGCTACCCCTTTGCTCTCATAAAAAAGCCGCTGCCTTAGCGATTTTTTAAGCTCTTTAAAAACAAAGAATTTATTACGAGTAACATAGAAATGATTATTTTATTACTATGTTACTTATGTGCTTAGCGGCATATCATAAATTATGCTAGGCTTACCGTGCCTTTTAACCAAGGTG # Right flank : TTGAGTGGCCGAGCGTGTCACCATGCTGCGAGATAACTCGTGGCTACGAATACATGGCCCTAGTGCTCTTCATCAAAAACTTGAATTTGATTGCGGCCGGATTTTTTTGCCACGTAAAGTGCGCTGTCGGCGGCAAGGATTAGCATATCGGCGGTGGTGTGTTTATCTGGTTTACAACTATAACATCCGATGCTGAGGTGGTCGGCGATGTTTGAATTTGGGTGCAGAATATTTAGTTGGCCTATTTGCTGTTGTAGTAATCTGGCAAATTTTAAGCAGTGGTTTTTATCAATGCAGGGTAACACAATTGCAAATTCTTCGCCGCCGTAGCGGGCTGCTAAATCCCCTTGTCGTTTACATAAGTTATGCAATGTTTGGGCAACTTGTTTAAGTACTTCGTCGCCTTGCTGGTGGCCATGATTGTCGTTATATCGTTTGAAATAGTCGATATCACATATGATTAAACTCAATGGTTGCTGTGAGCGTGTTGCACGTTGAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCACGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.01,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //