Array 1 42-401 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLMU010000022.1 Psychrobacter sp. TAE2020 Scaffold_32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 42 32 100.0 33 ................................ AATGTTGAGCTAGGTGAGTTCGATTGTCATCAC 107 32 100.0 33 ................................ AGAACGAATAATGGATAGAGTCACAGCGGCTTA 172 32 100.0 33 ................................ GAGCTAATGACTTAGCATTGGCAGCAGGTGCTA 237 32 100.0 34 ................................ AGAGAGCCAAAGCAAGTGCATAACTCAATAGGAG 303 32 100.0 35 ................................ ATTAAAGGCCATGCGGTTGATGTGATCGCTAAGCA 370 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 6 32 100.0 34 TTCGCGTCCATCACGGGCGCGTGGATTGAAAC # Left flank : GATTGAAACCATTTATCAAGCATTTTGACGGTCAAATGTAGT # Right flank : CCTAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCGTCCATCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.80,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 2826036-2822370 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLMU010000001.1 Psychrobacter sp. TAE2020 Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2826035 32 100.0 33 ................................ TACTAACTGGCCTAATTGTACAGGGTTTAGGCC 2825970 32 100.0 34 ................................ TGTCGTTGTATTTGTCTGTTATAACAATGACTTC 2825904 32 100.0 32 ................................ CAACTCAACCACATCGCGCACCAAAAAAACAT 2825840 32 100.0 33 ................................ TCCAATGCAACTGTAGCAGGTAAAAACAGCGTG 2825775 32 100.0 32 ................................ AAGCAAGGCGGTTACACGGGCAACATGGGCGC 2825711 32 100.0 33 ................................ GTTACCCCACTTAATTAGCGTACGGGCCGTAAC 2825646 32 100.0 32 ................................ ATGATAAACAAATGGGCGCTTGAGTACGTCGC 2825582 32 100.0 32 ................................ CGATACATAAACAAAACGACTGCCCATAAGGC 2825518 32 100.0 34 ................................ GATATAGATATAATAACATATCTGTACTAAAATA 2825452 32 100.0 32 ................................ GTGCTACCTTCACCAAGGGCAGCGCCTACTTT 2825388 32 100.0 32 ................................ ATTTCATCAATACGACCAGTGATGTGACCCCA 2825324 32 100.0 33 ................................ TCTTAATGATGATACGAGGGCAGCAGCCGTAAT 2825259 32 100.0 33 ................................ GCTAAAGTCACAGATGGATATTGCCCCAGTGTC 2825194 32 100.0 33 ................................ AAGGTAACTAATATTAAGGGCCTAAACCCTGTA 2825129 32 100.0 33 ................................ TAATTGCACCTGTGGATAAAATAAGGCCCTCAT 2825064 32 100.0 33 ................................ TTGTTAGCGTCAGCCGACTCGTTAGCAGCATCA 2824999 32 100.0 33 ................................ TTGGTCAATATCATTGATGATAGCGATTTTCTG 2824934 32 100.0 33 ................................ AATGTAGCTACTTGTTTTATTGCACCAAATACC 2824869 32 100.0 33 ................................ CTGTCATCAATAACACCAAACTAAGCCATGAGG 2824804 32 100.0 34 ................................ AGCAAAGTCATAGAAAGCGCCACGCAGCGAATGG 2824738 32 100.0 32 ................................ CATGAATAGATAATAAACTCTAACCGCTCAAG 2824674 32 100.0 34 ................................ ACTATTGATGTGCCGCTAGACGATAGCGATGTTA 2824608 32 100.0 31 ................................ TATTCTTGGATGATTTCAAACAACTGCCATG 2824545 32 100.0 35 ................................ GTCATACTTTTGCTTAGTTATCTTTTTGACAAACA 2824478 32 100.0 32 ................................ TAGTGAAGCAGTGGTTAAATTCATTGCCAATA 2824414 32 100.0 33 ................................ AATCCAAGTCGGCAGAATCCTAGGTAAGGATTC 2824349 32 100.0 32 ................................ ATCCAAGGTGATTAAAGTCATAATCAAACCGA 2824285 32 100.0 35 ................................ CATGTTATCAGTGATATGGTGGTCATAATCCTGAC 2824218 32 100.0 34 ................................ GATATAGATATAATAACATATCTGTATTAATAAA 2824152 32 100.0 35 ................................ ACTTTAGCAATTGTCGACGAGGTAGGCGCATATCT 2824085 32 100.0 32 ................................ AAGAAGATAGAGTTTGGTTACCTAAAGGGCAA 2824021 32 100.0 34 ................................ TCAGATAACGCATACTCAGACGTAAACTTGTCAG 2823955 32 100.0 33 ................................ TTAGCAACAATGGCCTCTGCTATGTTGTCAAAG 2823890 32 100.0 32 ................................ AGAACGCTGTGCAATGGCTATATGACGGATCA 2823826 32 100.0 33 ................................ AAACTACCGTTGTCTTGATACGTAAGCCTAAAA 2823761 32 100.0 33 ................................ TCTACAGCACGGTTAAGCTGTGACAGTAAGAAT 2823696 32 100.0 36 ................................ GGTACGGGTGACATCTTCACATCAGCAGCGAAGGTT 2823628 32 100.0 33 ................................ AAAATAATCCATTTATATGTGATTCTGATAAAA 2823563 32 100.0 35 ................................ GCTACAGATAGTCAGCTCATTTAAACAAGCTGCAA 2823496 32 100.0 33 ................................ TCCAATGACTCGATAACAAATACCGTTCCAGTT 2823431 32 100.0 32 ................................ TTAGAGCGCAATCATTTCAAGCCATTAGAAAA 2823367 32 100.0 32 ................................ TGAGTAAACCTTGTTGTTTGGTATTAGCAAAT 2823303 32 100.0 34 ................................ TTTTAAGCTCATGTTAGTTTCCTAGTTTCCTAGT 2823237 32 100.0 32 ................................ TTGCCCCACAGCATCATATAAACTTGACCTTG 2823173 32 100.0 32 ................................ ATCAGACGGTCTAGCATATCGTGTGAAAACCC 2823109 32 100.0 33 ................................ TCTCGAGCAAATCCTCGTAAAATGCTAAGACTG 2823044 32 100.0 32 ................................ TCTCAATAGCGACACCGCATATAGAAAACGGT 2822980 32 100.0 33 ................................ CCTACTGAGCTAGACGCTATTAGAGCCAGTGCC 2822915 32 100.0 32 ................................ GCTCAGAAACTAGTAGTTATCACGATGATGAT 2822851 32 100.0 32 ................................ AACTGAGAGCGAAACGCTTTGGCAAGGTTGGT 2822787 32 100.0 32 ................................ GCTTGAGCGCGTGACCGTAGATAAGATATCGG 2822723 32 100.0 32 ................................ TGTACGACATCTTCTAAGCCACCTATGCGGTG 2822659 32 100.0 33 ................................ AATACCGGCATCGCTCCATGCTTGAAATACAAG 2822594 32 100.0 33 ................................ AGTTGATAGAAGCTAGTAATTGACACTCATCTT 2822529 32 100.0 32 ................................ TCTCAATAGCGACACCGCATATAGAGAACGGT 2822465 32 93.8 32 ...........A...............A.... TTTATGGAGACAATAAAGCATGATACTCAAAA 2822401 32 81.2 0 .....AC.T...G.A..T.............. | ========== ====== ====== ====== ================================ ==================================== ================== 57 32 99.6 33 TTCGCGTCCATCACGGGCGCGTGGATTGAAAC # Left flank : GCCAAACGTCTACGCCATATTGCCAAGCATTGTTTGAACTATGGGCAACGAGTACAATATTCAGTATTTGAAATTGAGGTCAATCCTGCTGAGTGGACGATGCTTAGAGCCAAGCTTGAAGATATTATCGATCATAGCGTTGATAGTTTGCGCTATTATTATCTCGGTAAAAACTGGCAAAATAAAGTAGAACATATAGGGACAAAACCTGTGCTAGACTTAAACGATGTATTGCTGTTTTAGTCGTTATCATCATAAATAATTATCTTTAAACCTACTATCTGACTGTAATAAGGTCGATGCGAACCTATAGCGTACATAAAATCTCTAGGAGACTCGCAAAGGGGTCTCAATGCTATTTAACAACTTGATTTTACCACATTTATTTTCGTACGTTAAAACTTTGGTAAGCGAAATGCTTGCCAAATTTGCTCATGGTTTAGACGTTCGCAAATTTCAAGGTTTTTTCTTAATCTTATTAGCGACTTAGACTAGGGGCT # Right flank : TTACTTTTTAGCTATCCTGACCGCTATCGCAGTCATTTCATTCTGAAATTCACCTAATATACTATTTTTATTTCATCTAAGACCTTTATACATTTTCCTAAACGGCTTCTCTATTTACCCTGCCCATTCGCTTGCTAACTCTAGCTCACTTCTAAAGTGATTTAGATAAAGTCATCGTAATTCCTCTCTACATAACTTTAAAAGTAAGATAAGGCGTCACATGTTGTCGCCTAGTTAACGAAGTGGGATCTAATTGCTCGCCAGTAATAGTAAGATATGAGTAGAGGTCAATAAATGGGCGTATCGACCACATTAGATCATAACCTTAGTGGAGTGTCTATGAAGTCACTTAAATCATTATCGATTGCCAAGTTGCAGACAACATCGGTGCTCGTATTTCAAGGCATCTTTGATCTATTTAATATTTATACCTGTTGTATCAGACCGTTTATTACTGAAGCCTTTAAGCTTGAGCATAGCGCTGCCTGGACTAGACCTAC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCGTCCATCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.10,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //