Array 1 5230-3642 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKOL01000059.1 Acinetobacter nosocomialis strain TUM15298 sequence059, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5229 28 85.7 32 ...A.......TTC.............. ACTGATCAAGACCTTTGTCATAACGTTGTGAT 5169 28 85.7 32 ...A.......TTC.............. ATTTAAGAAAGTCTAGTTCAAGAGCCGTGTTC 5109 28 85.7 32 ...A.......TTC.............. ATCATTGCAATTGCTTGACCAAAATCTTCATC 5049 28 89.3 32 ...A........CC.............. CTATTCCAGATCAAAGATATTGTTCAGCAAAA 4989 28 92.9 32 ...A......A................. AAAAGGGAAAGATGTTTTTTGGGCCTGTTCTG 4929 28 96.4 32 ...A........................ GCTGCTATTGCTGCATTGTGGGATGACTACCA 4869 28 96.4 32 ...A........................ AAAACATTGGACAAACCCAAGTCATTGGTAAT 4809 28 96.4 32 ...A........................ CAGTCTTGCATCATTTTCCGTCTAGCCTCTAA 4749 28 100.0 32 ............................ TCAACTTCTTGAGAGTGTTCATAAGATTCTAC 4689 28 100.0 32 ............................ AGAATGGCAAGCGGCTTGCCTACGTTATCGCT 4629 28 96.4 32 .........T.................. TTGTGCAGCGGCTCCACTCTGAACAGCATCTA 4569 28 92.9 32 ............CC.............. AACTTATCAGCCACAATAAAAGACTACGTGAT 4509 28 89.3 32 ...CG.......C............... TGAACCGTCAGTCGGTTTAAAATCAACAGCTT 4449 28 100.0 32 ............................ ATCAAACAAATTCATTGTTAAAGGCGTCGACC 4389 28 100.0 32 ............................ TGAGTTCAAGTCCTACAGTCGGACTTGAACAA 4329 28 100.0 32 ............................ AGGCTGTGCTGTAATTAGTTTAATAGCCATGA 4269 28 100.0 32 ............................ CGTCGGTCATAAGTCCACCTTCGGAAAATCAA 4209 28 100.0 33 ............................ ATAATCAGACTGTGCATTTTTAAGTGTTTTTAC 4148 28 100.0 32 ............................ TTGTCGGCTGTCGGACGGTTGATCATGTAGAA 4088 28 96.4 32 ...........T................ AAAGCTATATGGCTAATGGGTTGGATATTGAA 4028 28 92.9 32 ...T.......T................ ACCACCTGTGGTTAAAAAATCCCCTAATTTTT 3968 28 92.9 32 ...T.......T................ TTCTCGATTTTCTTTAATTTTGAAAGCTTCTC 3908 28 92.9 32 ...T.......T................ AAAGTAGTAAGATCTGGTGCATTTTGGATCTG 3848 28 92.9 32 ...C.....................T.. AAAAAGCATCCAAAGGCGTTGTCCTTGGTAGA 3788 28 96.4 32 ..G......................... CTTAGCAGATAGTTTTTTAGGCGCTGGTGTTT 3728 28 92.9 32 ............CC.............. CAATATTTCGGAGTTCCACAACGCCGCAGACG 3668 27 85.7 0 A..A........C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 27 28 94.4 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : CTTTAAAAATTGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGCTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGCACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGGAAAATGAAAGTGTTGAAGACGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCAAAAATTTAGCCTAAGACGATTAGGTTATATTTTTGAAAATTAGAAAAATTAATATAATTCAATGGATTGTATTGTTGTTCTGTTTTGAAGATTTTTGATTCATTAAAACTTTATATTTTTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCAA # Right flank : GAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGACGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATTATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGAAGGTTTAGAAGAAATACGTAGCGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGCGTACGCAGAATGAAGCTTGCATGGGTTGTTGGAGCAAAACATAAATTTGCCCATGACGGTGCATATCCAGTTGCATCAACCAAGAAACAGCAAAAGTTATTGATGCTAGATGAATGGGTCAAAGTAAGTAGCTTATTGGCAGGTGCAGCTGGGGACATGCATGATATTGGTAAGGCA # Questionable array : NO Score: 5.39 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 10319-11605 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKOL01000059.1 Acinetobacter nosocomialis strain TUM15298 sequence059, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 10319 29 100.0 31 ............................. AACTAAAAATGGTGAGTCAGTTGGGCCTGCT 10379 29 100.0 31 ............................. TCAGATCGCATAATGCCGACTATGTAAAAAA 10439 29 96.6 31 ............................C AAATGTGAAATTGACCCAGTCAATCACAGCA 10499 29 96.6 31 ............................A ATACATAAAAAGCCGAAATCTTCACCTAAAA 10559 29 100.0 31 ............................. AAACGGGTAAAAGCTTGCTCAACTTCTTGTC 10619 29 100.0 31 ............................. TCAGCACGACCTTTCTCGTACAAACGAAGCA 10679 29 96.6 31 ............................A TTCTGGATGTATTTAATGCATGGGTTATTTA 10739 29 100.0 31 ............................. TGCGTAATCATCTCGCGCTTGTTGTAATTTA 10799 29 100.0 31 ............................. TTTTGCCCGACAAAAATAAACCCCGCATCTA 10859 29 100.0 31 ............................. TAATTTGCTCTTTACGCTCAGGACTAAAATT 10919 29 96.6 31 ............................A TATACATGGGGTGCTAAGGAAACTGGGTTAA 10979 29 96.6 31 ............................A TTCCCAATTTTCCCAAATTTTAGAATGTAGA 11039 29 96.6 31 ............................A ACACTTTACGGTATGTTGGCCATTGGTGAAA 11099 29 100.0 31 ............................. AAAGCACCGCCACCACCTGACCAAATTATCC 11159 29 96.6 31 ............................C ATACGACTGCGAGACATAACCAAAAAGCGCC 11219 29 96.6 31 ............................A ATTACTTGTGCTCCGTTATATGCAGCTAACA 11279 29 96.6 31 ............................A TACATGTATAAAGGTAAACAGCATCATTTAA 11339 29 96.6 31 ............................C AAAACAAATTTAGGTATTGATAAAAATTTAG 11399 29 96.6 31 ............................C AAAACAAATTTAGGTATTGATAAAAATTTAG 11459 29 100.0 31 ............................. TTCGCCAAATCACGCATTACACGCTTAATTG 11519 27 82.8 31 ...AC.......--..............A TCCATTCAGTTGTAGAAAGACCGCCATATAA 11577 29 79.3 0 ....G.....A.......A.....ATT.. | ========== ====== ====== ====== ============================= =============================== ================== 22 29 96.6 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCACGATACTATTGCTGATATAGCCAACAGCTACCTTGATCATGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAGTTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGCCTAGTTTTTGACCTAGCGGACCTAGTGAAAGATGCTTTTGTGATGCCACTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAACTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGATATATGTAGTAAAATTAAATAAAATCATATATTTAATCTAAGTACCTCTTAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGGTTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTAAATCTTAAAAAGAAAAAACCCCAAAACTTACGTTTCAGGGCTTTTCACGAATTTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //