Array 1 453987-453780 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKDG01000001.1 Corynebacterium aurimucosum strain 2271 NODE_1_length_624265_cov_71.2261, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 453986 24 100.0 37 ........................ GCTCGTGAGTACCCCAAATAGGGGGTAGTCCATCAAG 453925 24 100.0 37 ........................ GCTCCTACCTGGGCGGGGTTCCTATCAGCGTCGCCCT 453864 24 83.3 37 ...T.........TT........G GCGTCGCCCCGGCAGCCTCTGACAATCTTGACCAGCC 453803 24 95.8 0 .....................T.. | ========== ====== ====== ====== ======================== ===================================== ================== 4 24 94.8 37 GTACGCCCCACGCACGTGGGGATA # Left flank : ATGAGCCCCCTTAGACGGGGTACCGCGCTGCGCGTTAATAGTGCTCCCCGCGTGAGCGGGGATGAGCCCAGCTCAGTGTCACGCAGGCCACCAAAGATGGAGTGCTCCCCGCGTGAGCGGGGATGAGCCGACACCGACCGCACGCCAGCATTAGGGCCAACGAGTGCTCCCCGCGTGAGCGGGGATGAGCCGGCCACGGCTGCGGCCCAGGAGTACGCGGATCGGTGCTCCCCGCGTGAGCGGGGATGAGCCCTCAACGGCATCCACACCTTCATCATCCCCACTGTGCTCCCCGCGTGAGCGGGGATGAGCCCAAGACCGGCGTCCTCGAGGATGAGGAGCGCCCGTGCTCCCCGCGTGAGCGGGGATGAGCCGCACTACGTTGTCGAGGTCCTCGGCCTGCTTCTTTGCTCCCCACCTGACCGCGGAAGCGCTAGGACTGCGACAGTCTGCTATAGTCGGATCTACTGTTGGGACGGCGTTCATGCAGTTGTCGGAGA # Right flank : ACCTCGGTAATGCTCACCACGTAAACAGGTATGAGTTTGTATAGGCCGTTGGAAGCGTTGTGTCCAACGTGTAGTCGAGCGAGTTTCCCAGTCGTTGTTGTTTTCGATATGGCGTGCACTCCGTTGCAGAATTTCTCGCTTTTCTTCGCTGGAGTTTCAATACTGACCTAATTTCGTAGTTTTTCTTTTCATGAGAAAACTAGGTCTTCCCCTTTCGCAGTACGCTAGGGTCAGTATTTGTGATTCAGGACGTCGACCCGCTCATCCATTCCCTGTACCAGGTCTTTGACCTCATCGGTGTGGTACTCAACGGCATTATCGGTGGCACGATTGCACGCCGTAGGGAATTCGACATTATTGGCTTCGTCTTTCTGGCGCTCTTTTCGGCGCTGGCTGGCGGCATGATCCGTGACATGCTGATCGCCAGCGGTCCGGCAGCGGCGATCTCTGATCCGCTGTACCTCACGCTGGCGTGTGTGGGCGCGCTCATTGCGTTTTTG # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACGCCCCACGCACGTGGGGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 457191-454051 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKDG01000001.1 Corynebacterium aurimucosum strain 2271 NODE_1_length_624265_cov_71.2261, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 457190 29 96.6 32 ............................G GCACGTACTGTCATCCGCGATTTCGTGGATGA 457129 29 100.0 32 ............................. CGGACAGGTGCCCCTCCTGCGTTGCCTGATTC 457068 29 96.6 32 ............................G GCCACCATCAAGAAACACGACCGTACTAAGGA 457007 29 96.6 32 ............................G GCTATCGCCATTCTTAGATACGAAAAGATGCG 456946 29 96.6 32 ............................G CGGTCAAAGACACAGCCGGTGGCAAGTCCAAA 456885 29 100.0 32 ............................. CAGCCCTTGACCGTGTCAAGGCCGCTCTTTAA 456824 29 100.0 32 ............................. AACACAAGAACACCCGGAGGCGGGCGACGCTT 456763 29 100.0 32 ............................. ACGGTTCCGTTATCCCAGCGCAGATAATCGGT 456702 29 96.6 32 ............................G GTCTATCCCGAATGGCCCGATGTGGCTACAAG 456641 29 100.0 32 ............................. GCTTATGCAATCCTCGCCGCCTGCGACCTAAA 456580 29 100.0 32 ............................. AGTGCGCACTCGACGCACTAACCGCAGGTGAC 456519 29 100.0 32 ............................. CCGGCTCGGGCTGTGGCGGATTTGCCGGTGAG 456458 29 100.0 32 ............................. GCAAGCCCGTCGTGCCTAGCAGCATCACAATC 456397 29 100.0 32 ............................. GGACCAGTTGCCCGCCCAATCAGGGCCGAACA 456336 29 100.0 32 ............................. TTTCGGGCCTTCTCACGTGCCCGCTCCATCGC 456275 29 96.6 32 ............................G TGATGAAATCATCGCTGCTAATCGTCCGCTTC 456214 29 100.0 32 ............................. CGACACACCGGCAAACTCACCGGCGTGTTCTC 456153 29 100.0 32 ............................. AAACGCCAACAGTTCCTTGGAGGACACCAAAC 456092 29 96.6 32 ............................T CATTGACACCGCAGCAGCCACCGCCGACTTGA 456031 29 100.0 31 ............................. CCCAGCAGGGTGTCGGGGCGTTTCAGGTCGA 455971 29 100.0 32 ............................. CTGGGACTTAAGCCCAGCCAAATCACGACGGT 455910 29 96.6 32 ............................T GACCCCCACCCCGCGCAGGGGTGAGGGTCAAA 455849 29 100.0 32 ............................. GCCCGCGGCTCCGGCAGGCCCGCAGCCTTAGC 455788 29 96.6 32 ............................G GCCACCAAACTCATAAATCGGGTGCCCGTCCT 455727 29 100.0 32 ............................. TCCACGACAGCATGAGCATCTTCAGCCCAGCC 455666 29 100.0 32 ............................. CAGAGGCGGTCCACGTCACCGCGACAGGCATC 455605 29 100.0 32 ............................. GCCGCCCGATGCAGCCCGGTCTGACGAGCCGA 455544 29 96.6 32 ............................G CTGAAGAAGTCACCACCGCAATGATGCGCGGA 455483 29 96.6 32 ............................G AAAAGGCGGCGAGGTCACGCAGAACCGTCATC 455422 29 100.0 32 ............................. GTTGCCGTTTACCGCGTCACGTACAGTGTCTT 455361 29 96.6 32 ............................G GACGGCAGCAACAGCCGGGTCGGGTGGCGTGA 455300 29 96.6 32 ............................T AGGCCCCAGATAATGGTGGTCATGGCGAATGA 455239 29 100.0 32 ............................. GGTGACGCCATCGGCAACCGTGACCAGCTTGA 455178 29 100.0 32 ............................. CGCCCCGGACACGCTACGCGTGGAATGCCCAA 455117 29 100.0 32 ............................. GGCACCTGCACATCGCGCACAAAACCGCCAGA 455056 29 96.6 32 ............................G TAATTTGAATGCGCACCGTATCCAGCCCCGGG 454995 29 100.0 32 ............................. GCGCCGGTCTTCTTGTCAATGATTGCGGTATC 454934 29 100.0 32 ............................. ACTCCGCCCCGACTAAGCCTCAGAAGCGCATC 454873 29 100.0 32 ............................. TGCTGATTGGTTTCGGATGCGATGCGTGCGAG 454812 29 100.0 32 ............................. CCTCCGGCGTGGGCTGTTGTGTGGCTCATCAT 454751 29 100.0 32 ............................. CCTTAGACGGGGTACCGCGCTGCGCGTTAATA 454690 29 100.0 32 ............................. TTGGTACGCCACTTCGCGGCCTCAGCGTTGAG 454629 29 100.0 32 ............................. CGGGCCGTCGGGTTACTGTCGGACCAGTCATT 454568 29 100.0 32 ............................. ATTCCCTCGATGAAGCGGTGCTCGGTGACTAG 454507 29 100.0 32 ............................. CCTTAGACGGGGTACCGCGCTGCGCGTTAATA 454446 29 100.0 32 ............................. AGCTCAGTGTCACGCAGGCCACCAAAGATGGA 454385 29 96.6 33 ............................G ACACCGACCGCACGCCAGCATTAGGGCCAACGA 454323 29 96.6 32 ............................G GCCACGGCTGCGGCCCAGGAGTACGCGGATCG 454262 29 100.0 32 ............................. TCAACGGCATCCACACCTTCATCATCCCCACT 454201 29 100.0 32 ............................. AAGACCGGCGTCCTCGAGGATGAGGAGCGCCC 454140 29 96.6 32 ............................G CACTACGTTGTCGAGGTCCTCGGCCTGCTTCT 454079 29 69.0 0 T........A.C...C..C...A.C..TA | ========== ====== ====== ====== ============================= ================================= ================== 52 29 98.3 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : AACTCGAAGTCATTGCTTCAGGAGTGAACTGGGCTGAAGAGGAGACACTTTCGTGATCGTTCTTGTCGTAACTGCATGCCCCGCTGGGCTTCGGGGCGACTTATCAAAATGGCTGATTGAACTAACGCCGGGCGTCTTTGTCGGCCGCCCTTCCGCACGAATTCGTGACTTGTTGTGGGAGCGAACCGTTGAACTATGTAAGGACGGAAGAGCATTACTAGTCTATTCGGCAGCAAACGAACAGGGTTTAGAATTCCGGACTCACCGGCATCATTGGCAGCCACAAGACTTTGATGGTGTCACGCTCATGGTTCGTCCTGCTCCTGGAAGCAAGAAAGTTCAGAACAGGACTGGTTGGTCACAAGCCCGACGGATTCGTTCGGCATACCAGAAACAGAAACGAAAATAGCTGAGGAACTCTAGACAGGTTCTGTGTCTCTTCCGAGAAGAAGCCGTATGTAAACTGAGGGTACGGCTCCTTTATACGCTGCTCAGCAAGT # Right flank : GGACTGCGACAGTCTGCTATAGTCGGATCTACTGTTGGGACGGCGTTCATGCAGTTGTCGGAGAGTACGCCCCACGCACGTGGGGATAGCTCGTGAGTACCCCAAATAGGGGGTAGTCCATCAAGGTACGCCCCACGCACGTGGGGATAGCTCCTACCTGGGCGGGGTTCCTATCAGCGTCGCCCTGTATGCCCCACGCTTGTGGGGATGGCGTCGCCCCGGCAGCCTCTGACAATCTTGACCAGCCGTACGCCCCACGCACGTGGGGTTAACCTCGGTAATGCTCACCACGTAAACAGGTATGAGTTTGTATAGGCCGTTGGAAGCGTTGTGTCCAACGTGTAGTCGAGCGAGTTTCCCAGTCGTTGTTGTTTTCGATATGGCGTGCACTCCGTTGCAGAATTTCTCGCTTTTCTTCGCTGGAGTTTCAATACTGACCTAATTTCGTAGTTTTTCTTTTCATGAGAAAACTAGGTCTTCCCCTTTCGCAGTACGCTAGG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //