Array 1 7867-6435 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCRP010000023.1 Enterocloster lavalensis strain SL.2.12 KNFEDICN_23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 7866 33 81.8 35 .............ATTT.T..A........... TCATGCTGGTCCACATCTCCACGTCCGCCTGAGGC 7798 33 97.0 35 .............A................... GGCGGTGCCGGTGGATCTGGCGATAGATATAACAT 7730 33 100.0 34 ................................. CAGCTGCATCATCCATGCGCGCCATCTCCTCGTC 7663 33 100.0 34 ................................. TTGGGAAAAGTAGAGGAAAATTAGTATTTCAGGT 7596 33 100.0 33 ................................. CGGAAGCCCCTTGCGAAAGAATTGCGGGAGATT 7530 33 97.0 33 ...........................C..... GCTCTTCCTGTTTGTCGGTGCTGACGCGGATGT 7464 33 100.0 35 ................................. GCCAATGTTCCATCGTCTCCGATAGGACCGGTCAC 7396 33 100.0 33 ................................. GGTTTTCTGGCTATCGCACCTGGCTATCAGGAA 7330 33 100.0 33 ................................. GATAGGGTCCGTCTCCCTTCTTGCCACCTGACC 7264 33 100.0 33 ................................. AAATCTGCGATGACAGAACCGCGATCCTTCACT 7198 33 100.0 34 ................................. TCTGATGTGAGGTATGTTTCTGTTTTCTCATAGT 7131 33 100.0 34 ................................. ATGATTTCACGCCGTCCAAGCGGATCGGAAGGTC 7064 33 100.0 33 ................................. ACATCTGCCGCAGCCAGTGTAATGTCCGCTGAC 6998 33 100.0 33 ................................. GGACGCTCTACGCGCGGCTTTACTATGATTACT 6932 33 100.0 33 ................................. CAATCCAATCATCAAGGAAGAGTCCGACCATAC 6866 33 100.0 34 ................................. CACACCAGAGTGTATGCTTGTACCGCTATACTAT 6799 33 100.0 33 ................................. AGGAGAAGGGGAACGGGCACCTGGCTTCAAAAT 6733 33 100.0 34 ................................. CCATTGTCAAATACACGACGATGGGAAAGACGGA 6666 33 100.0 33 ................................. AGATATTGACGGCTACGTTATGGAATCCACAGG 6600 33 100.0 34 ................................. TCGGCTGTATCCACATCTTCTACAACCAAACGAT 6533 33 100.0 33 ................................. TCTCCTTAATTTTTGGCCATATCAAGCCATAAA 6467 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 22 33 98.9 34 ATTTTAATTCACAGCCGCCACGCGGCTGAACAC # Left flank : AGCCCGATTCCGTAGAGCTGACCGACATTATTCTGCAAAAAGACGGAACCTCCCAGTTTGGCGAACGGACCTATGTCCACACCACGTTGGAATGTATCGACGGCAAAGCGGAATTCACCCTGGAAGAAAACCCCGTGGTGTATCTCAGCTCCACCATCAATCCAGAGGGCTTTTACCGCGGATTCCGTGTGAGCTGCACTTGGGAGAACGGTTCCGCGGCAGAGTATGGGTTTGTGTTCCGCGCGGGAACATGCTTTCCGATTGAATCGTCGCCGGAAACGTCGGCTGTATCGCCTACCCAGGCATAAATTTCCAAAAAGAGAGCCCTCGCAGCCAGTTCATGGCGTTGAGGACTCTCTTTTGTTAGTTACATTATAAATCATACCGCTATGCGATCGGACCTCGCCACCATCTCCGATATTCGATGGCCGGTCTGATGAGTTTAGTTCACAACTGCTATGCACACCACCGACCGCGATACATCTACTGCGGACCCACTT # Right flank : AGCAATACTTCACAAATTCTTCACCATATTTTATATAATTTCACCAAATCCACCCCACCCATTCTCAATTCTCCCCTTCACCCCCTTCAATAAATCAACACCATCTCCCCATTTTGTTCATTACCCTGGTGCGAATCCCCCAGCAAATTCATGTTCACTCGGTATTCGCACCGGCATTTTTCCCGCGTTGCCCTAATTCTTTCCAATAACATTTACAAAACACCCTAAAAGCTCCGCATCATACTGCCCTGGCGGGAGTGCATATAAGTCTTCGCCATTTACAATCGGCGACAATTCCAGTCGCATAACCTGACTCTTATAAAGTGACACGCTCTTTCTCTGAAGCTCCGCTCTGTCACAGTACGCTCCAGCCCGTATTGCCCTTACCAGCTTTGGGTCAACGACAGCCAGCGCCTGAGATTCATTTGAAATTATCTTGAAATCCTGTGCCATGGTACTGAACTCAAACGCACCCTCTTTTTCCAGAAAAAATCGTTGCC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAATTCACAGCCGCCACGCGGCTGAACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.00,-12.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 1 2489-3052 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCRP010000025.1 Enterocloster lavalensis strain SL.2.12 KNFEDICN_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 2489 32 100.0 34 ................................ ATTGCGTGCTTTTTGAAGCAGGCGCAGCCGGATT 2555 32 100.0 34 ................................ ATTGCGTGCTTTTTGAAGCAGGCGCAGCCGGATT 2621 32 100.0 35 ................................ ATCTTGTAACTATAATATACCATATTATGGCCATA 2688 32 100.0 35 ................................ ACCGCAAGCCCCAGGTCGATCTCATTATTCCGCAT 2755 32 100.0 35 ................................ TTTCTGATCAAGATATAAATGAATATATGGTAGAG 2822 32 100.0 35 ................................ ACAGCCAATCGGAACCCATCTGCAAACCCGGCCTC 2889 32 100.0 35 ................................ AACTGCTGTTTCCAGCTCGTCCTCTGAAAAACCGT 2956 32 100.0 33 ................................ GTACAGAAAAAGAATAGTGATTCTCTCGAATCA 3021 32 78.1 0 .....................CA....TCCCC | ========== ====== ====== ====== ================================ =================================== ================== 9 32 97.6 35 GTCACGCCTTATGGAGGCGTGTGGATTGAAAT # Left flank : CGGTTATGGGGCGATGCTGAGCTTTCGGGTGGAGGATGATCTGGAGAAGGTGGATGAAATGATCCACCGGCTGAAGGTGATCCGGTACCTGGGAACCCTTGGCGGCATCCGCACCAGCCTGGCCCACCCCGCCACCGCCTTCCGCCATGAGTTCAGCCGCGAGGAGCTGGAGGCGGTGGGGATTTACGACGGATTGGTTCGGATTTCGGCGGGGATCGAGGATGCGGGGGATTTGATTGAGGATTTGAGAGAGGCGTTGGGGGTGTTTGGGGAGTGAGGCGACGGAAAAAATGGAGATAGGGAGGTATTATGATGAGATGGCTGAAAGGTGCGAATGTGAAGTGAACATGAAAATGCAGGGGGATTCGCACTGGGGAATTGGATAAATATGGGTCTATAGCTTGATGGGAGAAGGAAAAGATTGCGTTTTGGTGGGGGAGGGTGTAGAATATAGATGAAATTGTTGGGGAGTTATGGGGAGATTATTGGTTAGTTTTGCT # Right flank : CACCCCAACAACCCCCAAAGCCCGCCAGACTCCAAATTACCTCCGGAGCCCAGCGGGCTTTCTTCCTATTATATATATTCTTTTAATTCCAATTATTTCTAATTTGTGCCCTTCTTCAAATTCTTCTGTGCAGTTGCCAGCATGAGCTTGATGCGGTTTAGCTGGTTGACTTCGCTGGCGCCGGGGTCGTAGTCTACGGCGATGATGTTGGACTGCGGGTAGTGGCGGCGCAGTTCCTTGATTACGCCCTTGCCTACGATGTGGTTGGGCAGGCAGCCGAAGGGCTGGGTGCAGATGATGTTCTCCACGCCGCTGTGAATCAGCTCCAGCATCTCGCCGGTGAGGAACCAGCCCTCGCCGGTCTGGTTGCCCAGGGAGACGAACCCCTGGGCCATGCGGGCCAGCTCGTCGATGGCGGCAGGGGGCGTGAAGTGCTTGCTGGCCTCCAGCTCCTTGCGGGCGGTCCGGCGGAAGTATTCCAGCAGGGCGATTCCCGCGTT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:0, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCTTATGGAGGCGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 1 172563-172998 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCRP010000014.1 Enterocloster lavalensis strain SL.2.12 KNFEDICN_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 172563 33 100.0 36 ................................. GTCTCCGCGGCAAAACCGGAGACTACCATCGTGGAA 172632 33 100.0 34 ................................. GCAATCTCTGTGTAATCTCTCTTCCTTCTTGATC 172699 33 100.0 36 ................................. TGCTTTGATCTCCTCCGGGAAGTCTAACACGCGATC 172768 33 93.9 33 ........T...T.................... AATCCCAACGACGAGTTTGACGAGGAGAGTGTG 172834 33 100.0 34 ................................. GTGAGATTATAGGCCCAATCCAACCAACCTGTGC 172901 33 100.0 32 ................................. ACAAAGAAGTTCCAGGATCGTTTAATCACGTC 172966 33 90.9 0 ..............A........A.....G... | ========== ====== ====== ====== ================================= ==================================== ================== 7 33 97.8 34 GTCACAGCCTGCGAGGGCTGTGTGGATTGAAAT # Left flank : TCCGGGAGCTTGACGCGAATACAGGGCGTGTGGAACTGACGGAATTGTGTTATGAGAATTTGGGCCATAATATAGCGGAGGACAGTGAGGCGGTAAAAACGCTGAAGATAATGGCGGCAGCCGAGCCTCTCCGCCACGACGTCAGTTATCCGCGAATAGATGGAAACAAGACCGAGTCGTTTCGTTGGTTTGTCAATAACCGTACAAGGAAAGAGACAAAAACGCTGCAGCCAACATTTTCCAAGATTCTTCCCAAAGCTGAGGAGGAACTGGATACGCAAAACATATGCGGGAAACGCCTGCACACGTAAGCGTAATTTAAAAATCATAAGTCACAAAGTGCGAACCACAAGCCCACATAAAATCCCAGGAACATTCGCACCGGAAATGGGAGGAAAAAAGGAAGAAGTTGTAAGAAGAGGGTTGATTTGTGGGGGGAAACGTGTAGAATATGAAATAAGAGAGTGGAGATTTAAGGAGAAAAATTGGTGAGATTTGCC # Right flank : TCCACAGGCGGTCGGCTAATTTATTAGCCGATGACTCACAGCCTCCGCCTTTACTCCCCCTTCATCCACCTTCTACCCAAAACCCGCCCCTCACCCCCAAACACCCCCAACATTTCACCAAAAATTTCCCCTCATCAGGATACTTCCTCCCAAAATCCGGTACAATAAACACTAGACCGGAAAAGGAGGAACAGAAAATGAAAGACTCAAACAACCATTGCACAATCGATCTCCAAACCCTATCCCAATACCAACAACACCTCTACGAACAGGAAAAATCCTACCCCACAATCCAATCGTACCTGCGCAGCATCAAGGCATTCGCAGCCTTTTTAGACGGCCGTCCATACACCAAAGAAACTGCGATCCGCTGGAAGGAAACCTTAACTTGCCGCTACGCCCCCAACACCGTCAACGCTATGCTGGCCGCGGTCAACGGCTTTGCTGAATTTTCGGGCTGTCCGCAATTCAAAGTAAAGCCCCTGAAAATTCAGCGCGAG # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGCCTGCGAGGGCTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACAGTCTGCGAGGACTGTGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.50,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 133567-136885 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCRP010000005.1 Enterocloster lavalensis strain SL.2.12 KNFEDICN_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 133567 33 100.0 34 ................................. TCTCGTTGGTTATCGCTATGGGCCTTACGCTCGG 133634 33 100.0 35 ................................. TGTATCTGCTCGTCGTATCGGCTGGAAAAGTCGCC 133702 33 100.0 33 ................................. TTACAGAATTGCGTAAAGCGTTTATTGATAATC 133768 33 100.0 33 ................................. CTTCGTGAACCCCGTCTGGCCGATCTGGGCAAT 133834 32 97.0 34 ................-................ AAGTAATACCCCACTGCGATGAAACTCCTGGCCG 133900 33 100.0 36 ................................. ACGATAAAACCTGATCGGTTACTGACAGTGATCGGT 133969 33 100.0 33 ................................. TTCTGTCATCTGTGTTGCTACTGGCTCGATAAC 134035 33 100.0 34 ................................. TCAACCCATGTTGCAATATCCTCCCTGGCCTGAA 134102 33 100.0 33 ................................. AAATTGTCCTTGCGGGCCACATACGAGCTGCCG 134168 33 100.0 35 ................................. TTACGTGATCTACCAATCCATTGAGGCCGCGCAAG 134236 33 100.0 34 ................................. CCCAATCCCATAGGGCGGGTCTATTATGGCAAGG 134303 33 100.0 35 ................................. CTGACGAACTTACTTTCCGCCATAGATATCGCCCT 134371 33 100.0 33 ................................. TGTACGAGGACTACGAAGCCAAGTACAGGGAAG 134437 33 100.0 34 ................................. AAGTTAGGTAGCTGTATGTGCTATTCGTACGGAT 134504 33 100.0 35 ................................. TGAATTGCGCAAAGCGCTTATCAATGATCATGACA 134572 33 100.0 33 ................................. CATCATCTTCTTTCGTGCTTACAGCCCCCCATG 134638 33 100.0 34 ................................. TACCAAGGCAAACTGTCCAGCGTGGCCTATGTAA 134705 33 100.0 34 ................................. CCGGGTTCCCACCTGCTCCATATCGTAGTAATAC 134772 33 100.0 33 ................................. TGATCATGCTCGCTCCTCCTTACACCGGATTGG 134838 33 100.0 34 ................................. CTCGGCAGAATAGTGATTTAGCGGTAAAAAAACT 134905 33 100.0 33 ................................. AGAGAGCTGTCCACGGAATCCTGAGACTGCACC 134971 33 100.0 34 ................................. TGTGTCCAAGCCTAAGTCTACTTATAATTATCGC 135038 33 100.0 33 ................................. TCTTCAAATACTTCCGCATTGGTGGCCAGCAGC 135104 33 100.0 35 ................................. TGCGTCCACTCAGGATGGCGCAATGTGAGGCTTAA 135172 33 100.0 35 ................................. TTATCGTCGAAATGTTCCCCGTATGCTCCCCAATC 135240 33 100.0 35 ................................. CTGTCCCATGCCTCCGCCAACTCCTGGAGGCTCAA 135308 33 100.0 35 ................................. AAATCCTGATTGGGAATCACCTTAACCGGAACAAT 135376 33 100.0 33 ................................. TGGTCTGCCCGAACTGATCATGTACCAGCTTTG 135442 33 100.0 33 ................................. TGCTCGTATAGCGCCATCATCCGCTCCAACTCT 135508 33 100.0 36 ................................. CCGCTCGGAGGATTGCAAAACACGCGGCAGCCTCCC 135577 33 100.0 35 ................................. AGATTCCAATGCTGTGTTGGATGATGATGAAATGG 135645 33 100.0 33 ................................. TGCTTGGTTGTCTGCCTATGCTAGCGGGCCTTG 135711 33 100.0 33 ................................. TTTTCAGTCTCTTTCTTTGCTCTTGGCATAGCT 135777 33 100.0 34 ................................. TTGACACCGGACGCTCTTTCGCCAGCTGCACCTT 135844 33 100.0 34 ................................. CGGATAGATCCCGCTCCACCGGTCCAATATCTGA 135911 33 100.0 35 ................................. CAGATACATCGGCATTTTGGCTATGACGTGATACT 135979 33 100.0 34 ................................. TCAATGCCCAAAAACTTAAATTCACCCTGTAATT 136046 33 100.0 33 ................................. TACAATTAAGAAACGTTTTGATAGTGCACATGC 136112 33 100.0 34 ................................. CTGTCCTGTCTGCTGCTCTCTCCTACGAACCTAT 136179 33 100.0 35 ................................. AGAATGTAAAAAAGTATCTCCAGAGTGCATACGAG 136247 33 100.0 33 ................................. CCCTCCTCGATATTGTCAGGGCATGTCAGGCGC 136313 33 100.0 36 ................................. CTACGAACAATGCAGGGTTGTTGTCTGTACGGCTTT 136382 33 97.0 33 ..........A...................... TATGCGGAGTACACAGGCAGAAGAAAGATATGA 136448 33 97.0 34 ..............................T.. TCTAACTCATACTGTTTCAGAGTTTTCATGGCCT 136515 33 100.0 33 ................................. TGAAAAGGAACGCCCGGAGTCTTTGAAGATATT 136581 33 97.0 34 .......................A......... AGGAAAGCCGCATAGAGCTTACCAAGGACGGTTT 136648 33 100.0 34 ................................. TGCATAGGAGATAGAGTTGTTTGGGAGTCACAGA 136715 33 97.0 37 ....................T............ ACGAAAATAAGAGATCCTGTAACCCAATGCGCCGGAG 136785 33 97.0 35 ...............................T. TTCGTCCGCAGATATGCCAAAGACCTGCTCATAGT 136853 33 69.7 0 .....A.....AA........TCA.....GCTC | ========== ====== ====== ====== ================================= ===================================== ================== 50 33 99.0 34 GTCGAGGTCTGCGAAGACCTCGTGGATTGAAAT # Left flank : AGAGGTTGACAGCCTGCGCTTTTATCATTTGGGAAACAGCCACAAAGCAAAAGTGGAGCACGTGGGACTTTGTAAAGGGATTAATGTGGAAGAACCATTGCTTTTTTGAGAGCGTTTGATGGGTGTTTTTCCGGAAAGTCGGCTCAAATGAATGGGACGAAGAGAGAATTTCAAGAGAAATGTAAATAAACGGTGAGTATCTCATGGGTTTATAGGGCGTGATTAGTCCGAAGCGTTTGAGGAGGTGAGTATGTATTTTAAAGTTGTACCAGATTGAGTGGAGATTCCTTTAGGGCGGCTATAGGAATTGGTCGATCAACACGTTCAAGTGCGAAACTCAAGTGAACATAAATTCCCCAGCAGATTCGCACCGAAATAATAGACGAGTGTTGATAAATGGGGAAGCTATTTAATAAAAGAACTTGGGGGAATGTAGTGAAGTGGAATGATATTTGTGTAAATGTGCTGTAATGATATGCTTTTTATTGGGCATGTTTGCT # Right flank : CTATTATGTAAAATATATCAATGGGCTCTAGCCAGTAAATCTCCTTGCATCCTCAACTTTTACATACTATAATAAAACAGCGTAAAACAAAAATGACAAAGATAAAAACACAAACTGGTTGGTAGTCCAGTTGCGGCTTCTCATCTTCCAATCTCTCCTCTCAAGCCGTCAGTAACCTTCCTCCTTAGGTCGTCCGTTCTTTGCCCATTCAAACTTTTAAGGAGGACAAGAAATGGACAAGGCAGCGGTAACCCTACAAGTATTTTTCGAAGATCCTTTTTGGGTAGGAATTTTTGAGCGGGTGAGTGCCGGGAAGTTAGAGGCATGTAAAGTGACATTCGGTCCAGAGCCCAAGGACTACGAGGTTTTGGATTTCATCCGGAAAGGTTACTTCGGGCTGCGGTTTAGTCCGGCTGTGGAAGCAACTGTGAAAAGCCGTCCGGCAAGCCCCAAGCGAATGCAGCGGGAAGCCAGGCGCGAGGTTCAGAATGTTGGGATTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGTCTGCGAAGACCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.20,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [12-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 144488-145007 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCRP010000005.1 Enterocloster lavalensis strain SL.2.12 KNFEDICN_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =================================== ================== 144488 35 100.0 34 ................................... ATTCCAGGCAGAGGAATACACCATAGAGGAAATA 144557 35 100.0 35 ................................... CCAACCAAACATCTGCTTACTCAAACGCTTAAAAT 144627 35 100.0 34 ................................... AGAGTAAGTATATCCACATTCAATATTGGCTGCA 144696 35 97.1 35 ............C...................... ACTTTCAATTTGTCAAATTCTCCGTTTCCGTCATA 144766 35 97.1 35 ............T...................... GGTAATAATAATCTTACATCTATAATTGGATTATG 144836 35 94.3 34 .C..........T...................... GCAGATGTGAATCCATTGATGCTGTAGGTGGGCA 144905 35 97.1 34 ............T...................... AAGTTGTCTTTGCGCGCCACGTACGAGCTGCCGT 144974 34 80.0 0 ............C......A.......-C...CGC | ========== ====== ====== ====== =================================== =================================== ================== 8 35 95.7 35 GTCGCATTCTTGAGAGGGAGTGCGTGGATTGAAAT # Left flank : GCGAACTGGAAGCTGCGGGCGAGTTGGCCGACGCAAACGGGTCTGGTTCTGCGGTATTGCGGTTGTATTTGGAAAAGGATCCGGCGATCCGGGAGGTGGATTGTGGGTTTGAGGGAGTGGGTATGAAGATACCGGTGGAAGTTTGTTCCGAAGGCGAGGTCATGAAAATCACTGTAAAAGAGCGGGAGACTATGTTGCGGATGGTGAAGGAACTGATATTGAACGGAAACCTTGATTTGAGGCGATATATAGCGGGGGAGTGTGAGATTTAAAAACGGGGCTACAGGAGATAGAATGTAGGGGGCGGAGAAAAATGTAGAGGATACATAGTGCGAATCCTAAGTGAACATGAAAATGTAGGAGGATTCGCACTAGGAAATTGGGGATTTATGGGAGAATATGGCGCGGTGGAAATATAAAGGTTGAGTTTTTGAGAGAGGAGGGGTACAATAGGGATAAGAAATTGAAGGGATTAGAAGGGATTTTTGGTAATGATTGCT # Right flank : CTCATCATTTCTTTGATTGTGCCGCCAAGCAGATCCTTGAGAGCATCCTGAATATCCTCTGCGGACTGGATGTCATACTCCTGAAGGAGCTGCTGGATAATGTTTCTTTTCCCATCTGTCATTTGTACTTTGTGTACGGGTTTCTTTTCTCTTGCCATAATAAAAGGCCTTCTATGATTTTATTTTACCATAGAAGACCTTATAAAACCTTAGTTACAGAAAAACTTTCACATACTCAGAGAAGCTTTTCTATCCACCCCGTCATCCTCTCACAATCCCCTCACACCAAAAAAGAACTGCTAACTCCCACATCCCGCAGTTAGCAGTTCTTTTATTTCCCCTCATCATTTCAACCAATTCTATTCATTCCCACCAAAGCGACAAAACCACCGCCGCAATTCCAATCCCCACCAATATAACACCACCCAATTTTGTACTAATCCGATACAACTCGGACGGTTCATCTGCATAGCTGGATTTCCATTGTTCCGTCAGCTTCC # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:0, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATTCTTGAGAGGGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCATTCTTGTGAGGGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //