Array 1 39224-36003 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTYR01000018.1 Pseudomonas aeruginosa strain AZPAE14395 AZPAE14395_contig_18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 39223 30 100.0 37 .............................. CAGTGTTCAGCGCGCCCTTTACCAGAGCCTCCACCGT 39156 30 100.0 36 .............................. CACCCGGATGACGCGCTGGCGGAGGTCCAGGAACGT 39090 30 100.0 36 .............................. CATCAGATCAAGGCAGCACTGGTTGAGAAACCCCGT 39024 30 100.0 36 .............................. AACGGTGTCACCTCGGGCATCAGCGCTATCGCTCGT 38958 30 100.0 36 .............................. TTCGCGGCCGGGACGAACTGTCGCCCGCCGCCCAGT 38892 30 100.0 37 .............................. ACCTGGGCCGGCGAGGTCTACGTCGACCGCTCCGGGT 38825 30 100.0 35 .............................. CAATACCTCCGCCCAGGGTGGCAACCCGAAAACGT 38760 30 100.0 35 .............................. ATCTTAGCAAAAATGGTGCCCTAAGCGGAGGGTGT 38695 30 100.0 37 .............................. ACATAGTCCGCCTGTTCCTCCAGCACGCGGCGATCGT 38628 30 100.0 37 .............................. TTCGCGGTTTATGTCGGTCGATCCCTGGGAGGGTCGT 38561 30 100.0 36 .............................. GTTGCCTACAACTGGTGGTTGCCGTTCCTGCTGGGT 38495 30 100.0 36 .............................. ACCGATGTTCTACGACTGGATATCCGGCTATCAGGT 38429 30 100.0 37 .............................. TCAGCGCATTGCGCCGCACAAGCTCTTCGTCCCTGGT 38362 30 100.0 35 .............................. ATGTTCATCGACTGGCTTAGCGTTTCACAAGAAGT 38297 30 100.0 38 .............................. ACTTCGCTGTCGATGCAACGCAATCGACCCGCCCCGGT 38229 30 100.0 35 .............................. TGACCCGACAAAGGGTTTTTGCTCCGGTACTGGGT 38164 30 100.0 37 .............................. ATAGAACCAGATCAACGCGCCGGCATCATGCGGCGGT 38097 30 100.0 38 .............................. TCCGCCCCAGTACGACCATCTTCGGGCCGATCTCGAGT 38029 30 100.0 36 .............................. GGCCTCCTTTAGTTCGGTCGGATAGAGCGCCCCCGT 37963 30 100.0 40 .............................. CCCCCAGTAGCAGCGGCCAGGGCAGCCAGGGCAGCGCGGT 37893 30 100.0 36 .............................. AGGTCTATGGTGATGGTCATGTGGATGACTCCTGGT 37827 30 100.0 37 .............................. ACTCCACGCTCAACGGCGAAGGACTCCATCACCAGGT 37760 30 100.0 37 .............................. TTACCGGCGCCATCGTCCAGCTCGGTCGGCAGAGGGT 37693 30 100.0 36 .............................. CCCAACGCAGGCCCGATCCACCTGGCTCCCCATCGT 37627 30 100.0 35 .............................. ATTACGATTAAAACCGATTAATCAGGGAGAACCGT 37562 30 100.0 39 .............................. TGGATGATCTGGATGGCCAGTTTGTGGACCACTGCGAGT 37493 30 100.0 34 .............................. CTAACGCCCTGGAATGGGGCGACGATTACGGAGT 37429 30 100.0 37 .............................. TGGAGCAGCCAGGTGCCGGTTTCCGGAACAGAATCGT 37362 30 100.0 38 .............................. CACCCGTTCCGGCGCGGTCGATACTGTCCATAATGCGT 37294 30 100.0 37 .............................. AGACGCATTTCCCGCTCACCGACTCGCCCGGCCAGGT 37227 30 100.0 37 .............................. TGGGTCGTCGTCAAGGTCAGCACGATCTACGAGTCGT 37160 30 100.0 35 .............................. ATGTTCTGCCGAGCGCGATAGCCGCCGCTGTGTGT 37095 30 100.0 36 .............................. AACCGCTCCACGGCTGGGGTGCGCCTGGAAATGCGT 37029 30 100.0 36 .............................. CGTGCGCGCCGTCCCGCTGCGCTGGCAGCGCCTGGT 36963 30 100.0 39 .............................. CGACAAGCGTCAGGTCGTCGGCGTGGGTCGGCACCCAGT 36894 30 100.0 36 .............................. AGCACGTCGATGGTCGGAATGTAGGTGTAGCGCTGT 36828 30 100.0 37 .............................. TCGTTCCATCGGGTCAGATCCTGGAGGTCAGCCGCGT 36761 30 100.0 37 .............................. GGCAAGCCAAGTTTTTGGATCATCTCGCGGAACGGGT 36694 30 100.0 37 .............................. CTCGATGCGGCCGACCGGGTTTTCGATGGCCCATAGT 36627 30 100.0 36 .............................. GTCGCCGTCGAGTTGACGACTAAGCCGATGGAGAGT 36561 30 100.0 35 .............................. ATCACCAGTATGGCAGTGGACGGCACAAGCTCGGT 36496 30 100.0 37 .............................. AGACCACTCTCCGATACAGCCTGGCGATGGGGAGCGT 36429 30 100.0 35 .............................. TTCTCGATCGTGTAGAAACCGCGCTCCTGCAGCGT 36364 30 100.0 37 .............................. ACGCCGAATCGCTCGGATGGGTCACCGACCGCGCCGT 36297 30 100.0 36 .............................. GCATGCGAGGCCATCGCGCTGGCCACCGTCTGCAGT 36231 30 96.7 35 ............C................. AGCTCGCTGACGTCGAGGATGCGGCGGTGGAAGGT 36166 30 96.7 37 .................T............ CCCAGCGGGCGGTGGGAGGCATGAAGAAAACACCCGT 36099 30 100.0 37 .............................. CCGTCGCCGGTGATAACCGTGTTCGTGAATCTGGAGT 36032 30 83.3 0 .......TA.G............G.....G | ========== ====== ====== ====== ============================== ======================================== ================== 49 30 99.5 36 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : CATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGGCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTGGATAGCGCGCAGTGGACATTCCTTAAGCATCGTCTGTGCAACCTAATCAATCCGGAACAAGACAGTCTACGTTTCTACTACTTGGGTACGAACTGGCAGCATCGTGTGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTTAATGGCCCGCTGATTCTTTAGCGCCGGCGCGAACCTAAAGCGACCGACCAAACCCTGGGGGGTTCGCAACTCTCTAGCTTATTGATTTATATACTCTTTCTTTGAAGTTAGGAGTTTGAAGGCGCGCGCCTTGCTTAAAGAAGGCATGTTTCGCTGAAGTAAAAGGTTTTTTTCATGCTGATCAATAAGTTATAAGAGGGCGGT # Right flank : ATAGATTTTTGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTCTTCCCGGCCCAGAGTCTGGCCAGCAACTCTTGTGTCACGGTGTCGCGGCCCCAGGTCGAAAGAAAGACTAGGTTGCGCTGCTCGTCGCACATGCAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGACTGGGCATAGGAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCGAGGGGCGGTGAAGCCCCTCGGGGTGTGGTCCAACTGGTGCAGGGGAGCGTGGTGGTTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTCAGCCCATCGTCTTGGTGCAGCGGCCCTTGGCCGTTCAGGAAGACCTGGCAGAGGTACTGATCGCGTAGCGCGACAGCCGCTTCCGCTTGCTCCAAGGTCAGCGACAGTTCCTCGATGAACAGGTCGGTGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACAGTTGGTCCTC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //