Array 1 2958-2262 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHJC01000089.1 Clostridium tarantellae strain DSM 3997 contig089, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2957 37 100.0 36 ..................................... GCAATTATAGCCCAATACGCTGTATCACTAGATACA 2884 37 100.0 35 ..................................... TATCATCATCATTTTGAATTAATAAAATATTATCC 2812 37 100.0 37 ..................................... GGATCACCATAAACTCTAGTTTGAATATGTCTAAATA 2738 37 100.0 37 ..................................... AACTCATCTAGTGAAATAGCAAATTGTTTATCTTTTG 2664 37 100.0 38 ..................................... TATAATTAATTTTATATATGTATGTAAGAAAAATAATG 2589 37 100.0 37 ..................................... TTAAATAATACTGGACTACTTTTATTGATATATAAAG 2515 37 100.0 34 ..................................... ATATTAAGCCAACAAGAGGGAATAGTAGGGAATA 2444 37 100.0 37 ..................................... CTTAGAAAAGTAAATACTTCTTTTTCAGCGTTAGGAA 2370 37 100.0 35 ..................................... TTGAAAAACTCTTCCCTAAGCATTAATTCAAATTT 2298 37 97.3 0 ............................A........ | ========== ====== ====== ====== ===================================== ====================================== ================== 10 37 99.7 36 ATTTAAATGTTACTTCCATTAGAATAAGGATTGAAAC # Left flank : TTAAAGAAAATTTTAATAGGTAATCTAATAGCTATTTCTAAAGGATTGAAATATAATGTAACTGAAGAAATACATGCTTGGATTGATTTAAAAGAAAAAGATGTTAATTTTAAAGGCATTAAACATACAGCATTTATAGGAAAATTTAAAGTTAATTTTAACATACCAGATTATTTAGGTATAGGTAAATCAGTATCTAGAGGATTTGGAACTATAAAAAAAATATAATAGATTTGAGAACCAGTTTTCAATTTTTTTTGGAAATTAGTTCTCAATTTAAAACCAATATTTTATTGATATTCCTTATAATTTTTTTATGTAAACAAGCTATCACATAAAAAAAGCTTGATAAATCAATGATTCATAGGATATACTAAGTATGTAAGAGGGACAAAAAACATACTATTTTTCAAGAAAATAACATGTACAATTTAGTATCTTAAGCTCGTCTTATAATATTGTCAAAGTAGCTTTATTACTAAGTCTATTTAAATTTTAGT # Right flank : TAGTAATTCAATAAATTATCAAGTATTACTACTTCATATTTAAAGTTTCCTAACTAGGATTTTTTAAGTATTATTAATAATTGATTTAATTTTTATTTGCATAAATTCAAAGTAATTCTTTAGTATTATTTTTACATCTGTATTTTAATATATCTTTTAAAAGTTTATTAACAAATATTTTAAATAATTTTTAATGTCATTTAGGGTACACCTTTTTTTACGCTTTATATTTTATAAAACATAAAATCATTAAGTAATACTAATAATTACCAAATAATGCTAGATAATACTAAGTAATTCTTAGTATTATAATTATTCTTATCAAAGTAATTCTTAGAAATACTTTGTATTATTTATAAAGAAAAGACTAGAAAACAAATAATTTCTAGTCTTTTTTTATTTTATTCCATATTTCCATATATGTCTTCTACTGAACTATCTAAATCTTTATTCTTTAATTCATTTACTTTTTTATCTAATTCTTTATCCATTGAATCATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATGTTACTTCCATTAGAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 2 10850-10375 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHJC01000089.1 Clostridium tarantellae strain DSM 3997 contig089, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 10849 38 100.0 34 ...................................... TTATAACAACGTTGACCACCTTTGACTATTTCGT 10777 38 100.0 35 ...................................... ATTATTAATTCTTTGTCTAAAAATAAATTATCTTT 10704 38 97.4 37 G..................................... AATGTAATGATGTACTTTGTAAAACCCGATGATAAAA 10629 38 100.0 34 ...................................... TTCCTTATACATCTTTCTAATTGCTCTATTTGTT 10557 38 100.0 35 ...................................... CTTGCATTTTTAACTCTTCCTCTCTCCATGTTCTG 10484 38 100.0 34 ...................................... TGTTTTGCGTTGGATATGTTGTTTGTTACGGAGT 10412 38 89.5 0 .................................TTT.G | ========== ====== ====== ====== ====================================== ===================================== ================== 7 38 98.1 35 AATTTAAATGTTAGTTCCATTAAAATAAGGATTGAAAC # Left flank : TATATGCAAAATATTTAAAATAATTTTAAAGGTAGCTTAGTTTATTCTAGGCTACCTATGTTTTATTCAAAATATTTTTTAAGAAAATTTCTATATATAAATGTACTTATTCCTATAGAAATTAAAGTTATTCCAATAAACATAATAAATAATAATAGTATAAATAATTCCATTGTAATCACCTCTTAATAATGATTATGAACAAAACTAAAAAATTTTAGCCAAAATTAAATCTTTTATTCTATATTAAATAAAGAAAATACTTAATTTTTAAAAATAATATTATTTATTTTTTGTAATTACTTATAATTTTTTTATATAAACAAGCTATACTATAAAAAAAGCTTGATAAATTAATACTTTATAGCATATACTAAGTATGTAAAGTGGACTAAAAACACACTATTTTTCAAAAAAATAACATGTACAATTTAGCATTTTAAGCTCGTCTTAGAATAGCTTTAATATAGCATTATTACTTGATTAAACAAAATTTTACT # Right flank : TGAATAGCTATTGCAGTAAATTTATTTACTTTAATAGTTATTTTTTTATTTTGAAATATTTTTTAAAAGTGATATGTCTATATATAATATTATTACTAAAAGCTAATTTTAATAAATTCAAATATGTAAATTATTCTTATAAAAATATCTGTAATAAATAAAAAGGAGATTTAAATCTCCTTTTATCCTTATTATAATGGAATCTTAAAAATTTATATAGATATCACAATTCAATACTTATTCTAATGTATGATTATAATGTTATTTTTTATATTAACATTATAGACAATTATATGTTAAAATATAACTAATTATGAAAAAATTAAAAATAATTTAAAAAATAATTAAATAGATATCACTAAAGAATAAAACTTTATTTTAATAGACATAATATTTATGAGAATAAAACAGGAGGTGAGTCAATGGAAGCAATAAAACAAATAGGGGAATTAATTTTTAAAAATATAGATTCTGAAGATAAGTATTTAGATATATTTACA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTTAAATGTTAGTTCCATTAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.95%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [85.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA //