Array 1 1513234-1511615 **** Predicted by CRISPRDetect 2.4 *** >NC_012814.1 Bifidobacterium animalis subsp. lactis Bl-04, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 1513233 36 100.0 37 .................................... GACGATATGGCGCTCAGCGTGGCGGAGTGGGAGGCGG 1513160 36 100.0 35 .................................... AAGACCGGCACCGAACGCGACTTCACCATGACCTC 1513089 36 100.0 39 .................................... GCCCACCACAACGGCAACGGCGGAGGAACACGCGCCGAA 1513014 36 100.0 34 .................................... AAGCCGAACTCAATCACACGCATCAAAGCGAACA 1512944 36 100.0 38 .................................... GTATTCGCCGTTCGAGAGGAATGAGAGGATGCTGTCAG 1512870 36 100.0 34 .................................... TCGCCATTGGAGACGCGACGCAGGATACTATCCG 1512800 36 100.0 34 .................................... ACGACAAGCCGCCGCCACCGATATTCACCTGCGA 1512730 36 100.0 38 .................................... GGCCGCTTCGGTGACGGGCTGGTTTTTCCACCACACGC 1512656 36 100.0 34 .................................... AATCCCAGCCGCAAGGTCTGATGCCGCCTGAAAT 1512586 36 100.0 36 .................................... CACTGGTGGTGCGAATACGCCGAAACGGTGGAATGG 1512514 36 100.0 35 .................................... ATTGAGATTGATACCCGTGGCGCCGCTGATGAGAC 1512443 36 100.0 35 .................................... AATCCCTCGGCCCATGATTCGTCACGTGGGATCAC 1512372 36 100.0 35 .................................... AAACAGGTCAATCAGCGGCGCAGGGAGGAGACGAA 1512301 36 100.0 36 .................................... GAGTGAACAACTCACTGTGCGAACCATCGAACCGTT 1512229 36 100.0 36 .................................... CGGTTGAGCAGCCACGTGGTGATACTGCTCGCGCCA 1512157 36 100.0 38 .................................... CTTGCATCCAACGCGCACAGCATTGCATACGGGTATAG 1512083 36 100.0 39 .................................... ATCATCCTCACGGAAATAGTGAGCATCCTCGAGAACCTG 1512008 36 100.0 36 .................................... GGCCGCGATAGTCCACGAGGCGAACGAAGGCGTTGC 1511936 36 100.0 36 .................................... GCTCAAGACACTCACCGACCAGCTCAAGAAGACCGA 1511864 36 100.0 36 .................................... CGCGATCGTCACCGACTGCACTGTGTTCGCACTGTC 1511792 36 100.0 35 .................................... GCGACACCGAACGCCGCCGCCACAGTCGGGATGGC 1511721 36 97.2 35 ...................................A AGGGCCAGCAACGTCGTGGAGATCCATCAGGAGGC 1511650 36 91.7 0 ...........T.T.....................A | ========== ====== ====== ====== ==================================== ======================================= ================== 23 36 99.5 36 ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG # Left flank : ACGCACTTCAACGATGTGCGCCTGAAGAACTTCATCGAGATGCGGCACTGGGACTCACTGCCAATCGAGCGCGCGGAACTGCTCACGCAGATCGTGAGCAACCTGTTCTACGATGTGGAGCGCCGAACCAGCCTCGAATCGTACTTCAGCGGACTGACCGGCGAAGACGTGCACGCCGCAAAGGCCGTGCTGCAGGCGCGCGGGGGAGACGCGAAGCCCTACGACCAGCCGATGGACTACTGGGCCGAGGTGCTGGGTGTGGGCGATGCGCTCGCAGACGTGCCGGGCGACGCGAAGTGGCCGGAGGTGCGGCAGGGGTAGGAGCTATCCCGTGCGAGGGCTGCATCATGCAGCATAAAGCGGGGAATCTCTCGCATCAATACTTTGTAAGGATTTGTTGAGTTTGTGTAGATAAATCAGTCGTTTGTATCACGTCAATTTGTCTACCTCTCGCAAAAGCGCTTATCAGACTATGTGTATCAGTCTGTATTATGGCTACT # Right flank : ATGTACTCCGATTTTTATCTAAGCAAAAATGAAGTATGCTGAGAATAACGCAATGAAGCGAGGTGAAGGGTTGGAAGATACATTACCGATTAGTCTCATATGTGACTTTATCTTTTGTCCACGAAGGGCATGGTTAGAAATCCAAGGTGAGAAGATTGAGTCGTTACAGATGGAGCGCGGTTTTCATGACCATCGTGCAGTGGATGACGCCAACGGTGGCCGCGGGGATACTGACTATAGGGCAGTTAATGTGAATCATCAGGGGTGGGGACTGTCGGGGCGATTAGATGCGGTCCGGTTGAATGAAGACAACGGTGTGATTATCCGTGAATATAAAGCTACACCCGTGCGTAGGAGTATGGATGTGACACATGCCATGCGTATACAGCTCGCCTTGCAGGCTGCATGCATGGAGGATATGGGTTATCGAGTAGATGGGACTGAAATATTCTTTACCTCGCACCATCGGATTGTTCCTGTTGAACTAAGAAAATCCGATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //