Array 1 74921-73431 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABZFG010000003.1 Mycoplasmopsis anatis strain DP07 DP07_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 74920 36 100.0 30 .................................... AAAAATATCTTAAGTAAAACAATTAAACTT 74854 36 100.0 30 .................................... TAATTATGAAGAGATTGATAATAATTACTA 74788 36 100.0 30 .................................... TAGTTAAATTAAGATAATGGATACCGTCAC 74722 36 100.0 31 .................................... AACAAATTTTAAATATTCAAAAAGACAAATA 74655 36 100.0 30 .................................... TTCATAATTACTAAAATAAACATAATTTTT 74589 36 100.0 30 .................................... AACCAAATTGGCTTCATTAAAACCAAACGA 74523 36 100.0 30 .................................... GAAAATATGTCAGACAATACATTAACTTTA 74457 36 100.0 30 .................................... TTAAAAACTACTATTCAAAATAACAGTAGA 74391 36 100.0 30 .................................... AATTCTTTTTTTTAATATATCTGTACATTT 74325 36 100.0 30 .................................... AAAACTGCTGAAAACGCAAAAAATGAGTAG 74259 36 100.0 30 .................................... AAGCAATCGTTAATTGTTAACATCATTACA 74193 36 100.0 31 .................................... CATGCATTAATCTAACGTTTAAACTAGCTAC 74126 36 97.2 30 ...................................T TTGAAAAACAATGAAATTAACAGTGTGATT 74060 36 100.0 30 .................................... AGAGCATCCAGTAATGGAGTAGTATTAAGA 73994 36 100.0 30 .................................... ATTCTTTTCTTTAAATATATCTGTACATTT 73928 36 100.0 30 .................................... CCGTCTGATGTCGGAATCAATATAACCACA 73862 36 100.0 30 .................................... TTATGCTTCAACAGGAAATAAAAGTGTTTT 73796 36 100.0 30 .................................... ATTTCATTTTCATAATTTCTATGATTGTGA 73730 36 100.0 30 .................................... ACAACATCCATTACTATTTTTAACGAGCTA 73664 36 100.0 30 .................................... TTCTGTAAAAAATGTATAGTTAGCAATCTT 73598 36 100.0 30 .................................... ACTAGTTTTTTTAGTTAAAATCTCATTATC 73532 36 100.0 30 .................................... TCATTGTTCTGCTAGCTTGCTCAACTATTC 73466 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 23 36 99.9 30 GTTTTTTGGTTGTGCTAAAGTTGAGTTAGTATAGAC # Left flank : ATTATTCTGATTCATTAAATTCATTCATAGGTGATGATTTAATATCATTTCTACCTGATGCTCAAAAAATAACTAAGTACATTTTTGATATAGATGAAAACAAAGTAATAAGTAAAAATTCATTACTAAAATTTCTACATAACTTTACTACTGAAGGCAAGGTAAATATTATTCTTAGAAATATTGACTTTATCAAAATTAATGATTTAACTAATTTTCTAAGTTACTATAACTTTATCATCATCAATTCTAATCCTTTTAAATTACTTAATAATTGAGAAGAATTGGAATTAATATATATTGACTATGAAACTGAATTAATTCACATAGAGAATTATGAAATATTAAAATTTCACATAACTAATAAATTTGAATTATTTGATATTGATTACAAGGATATCAATAAAGATTCAAAATTATTGAGAAAAATCAAAAACTATGTAGATTCTAAATTATCTATTAATTAATGGTATAATTTTTATACCAAAAAACAATTTGAG # Right flank : AAAATTAATTAGAGAAGGTTATTCTAAACTAGAACACAAAAAGTTGACATTATTTTGCCAACTTTTTGTGTTCTAGTTTAGTTTGTATTGGTTTCTTGATTTTAATTAATAATTTTAATATGGCTTAAATTTATCAATGAATATAGACACTTTTGTAGATGCTTGTGAAAATCCATTATTAGCATTTTGTTTTAATTTGGGCTCAAAATTCTCTTTATTTTGGATTAGACTACTATACTTTATGTTTGCATCAGCAATGTTTTTGTACTTATTGTCGTTGTATTTTATAGTTTCAATTTTAACTAAATTGTGTGAAACATGATAATTTTTGGTATCAATATTTTCATCAGAATATTTAAATACCAAATCATTATAAACATAAACTAAAGAATCAAATATTTTTTTCTTATTATTTTTATCGAATTCTAATCAATTAATACTACTAAAATTACATTTTAATCATTCAATTAACATCTCTTTATCTTTTTTATTTATTTTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTTGGTTGTGCTAAAGTTGAGTTAGTATAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //