Array 1 27330-26774 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMYB010000021.1 Clostridium botulinum C strain IZSVe-TV_9877_3_12 NODE_21_length_37415_cov_84.4652_ID_2521, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 27329 29 100.0 36 ............................. GTTATTTAAGATACCTTTTACATACTCAATGTTTCT 27264 29 100.0 38 ............................. TCGAGACTGGAGTGGTAAAGTTGCTTTAGTAGATACTA 27197 29 100.0 37 ............................. AAATTAAATGTTGAAAATTCTTGGTTAACGGATTCAT 27131 29 100.0 36 ............................. TGAAAATTGATATTGAATATATAAAAGATAAAGTTA 27066 29 100.0 37 ............................. CCTAAAAAACAAAAACACCCTAGCCAATAGGCTTAGA 27000 29 100.0 38 ............................. AAAAGGTTAAAATCTGCACTTATAATTCTAATTGGTAC 26933 29 100.0 37 ............................. TATCCGAATTCAAAGTCGCTTTGTATTCTATCAGCCA 26867 29 100.0 36 ............................. TCTTTCAATATCTTCAACTATATTTGCAGTAGGATC 26802 29 96.6 0 .........................G... | ========== ====== ====== ====== ============================= ====================================== ================== 9 29 99.6 37 GTTTTAGTTTAACTATGTGAAATGTAAAT # Left flank : TAATTATGAAGAAGGACAAAGAGAATCTCAAGCTGATTTTATATGCAAAAAATGTGGTTATAAAGTTAATGCTGATTATAATGCAGCTAGAAATATCGCTATGAGTAATAAATATATAACAAAAAAAGAAGAAAGTAAGTATTACAAAATTAAAGAAAGTATGGTATAATAAAACATAGTTAAACTAATAAAAACAGGGCGATTTAACGTCCTAAGGCTGAGAGAAGTTTTTTCTACTCGGCAAGGGTTAATCTCGATTGTTGTGTTACCGATCGAGCGTTTCACAAAATGCGAGAGAAATCTCGCATTTTTAATTTTGCAGTAAGGCTAGTTTTTATATAAATATGCTATAACCATTGATATTGCTAGGCTACAATAGGTTTTATTAAAAAAGCAAAAAACATTACTGAAGGTTCACTGCAAAATAGTGTATTTAAGTGAAAGTGAGATTGCTTGTAAAGCTAGGAGTATCAATATATTTATAAATTTCAAAATTTAGG # Right flank : GAGCATAGCAATAAATTTTGTTTCATTTTGTTTGAGTAAGTTTTAGTAAAATACTATGAAGTGAAGGGATACGTATTATGAAATTTATCGAATCAATAGATCCTTTTTTGATGCAGTTGGTTATTGTTCCGCTAATAGTAATTGGATTAGGTGTTTTAGTAGCTTATAATATTAAAAATATATTAATTGGACCTTTAATAACATTGTTTTTAAATAGTTTATATGAAATTTGGTATATAAAACACTATTGTCCTGGATCAGAAATTAGTTTGAGTTCTTGGAATATTATTCTTCCAATGATTTCATTTACAATTTCTTTGATTGTAGTATTAATTAGAGAATAGGGTAATATTTAATAAAGATTATTTCTTAGGCTAGGTGAAATGTAAATAACCTGGATTTTCTTTAGTTGCAATAATATCAATACTAGGTTTTAGTTTAACTATGTGAAATAGAGAAGCAGAATATAAAAGCTGAAACTACAAAATATCCATAATGGA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTTTAACTATGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 35679-35152 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMYB010000021.1 Clostridium botulinum C strain IZSVe-TV_9877_3_12 NODE_21_length_37415_cov_84.4652_ID_2521, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 35678 29 100.0 37 ............................. AATTGAAGATTTTATTCAAAGATTAACACAAATTCAT 35612 29 100.0 35 ............................. CATTAAATAGGACCTGTGAAAATAGAGGAGATCAT 35548 29 100.0 37 ............................. CTCTTTCCACTTATTTAAATTATTTAATTCCTTGCTT 35482 29 100.0 36 ............................. CGCAGCTATATTAAACAACTAATCGAAAAGGATATT 35417 29 100.0 36 ............................. CTAGCCTTCATTCTGTGCAGAGTTTATAAAACTAAT 35352 29 100.0 35 ............................. CGTAGAAATTGTATCTGCATAAGCAATATTATTAG 35288 29 100.0 13 ............................. CGAGCGGTAAACG Deletion [35247] 35246 29 93.1 35 .....C..........A............ TTCGAAATATCGGAATATGTCTAATATCTCGAACA 35180 29 72.4 0 .............T....T.TAA..C.TA | ========== ====== ====== ====== ============================= ===================================== ================== 9 29 96.2 33 GTTGAGAATCAACAAAGGATATGTTTAAG # Left flank : AATATACTTAATAAAGATAAAGAATATGAGTTTACTGTTGAGGATGAAGTTATAGCATATGACCAGATTAAAAAACTTTATGAGGCTATGGATAAACTGGAACCATTGGAAAGGGAAATTATTAGCAGATACTATATTAATAATGAAAAATTTAAGGATATTGCAGAAGATAAAAAGCTTTTATATGATAGGACTATTTATTTGAGGAGGAGAGCCATTAGGAAACTTAGAGGGATCATGGAAAAAAAACAATAAATTTAAAATATTATCATATAAAAATTGAATAAATATAATCGTATGTGTTAAAAATATAAATAAAATTATTACCAACCATAAAGGTCGACTTAGCGTCCTAAAATTGAGTAGTACCAATAAGTCTAATAAGATTAGCATGGCAACTCTCAGTAAGCCTCAATTTGATTGGGAAGCTTTGTGCAGATGCTAGTAATAGCAAGGCGTACAATGATATATCCATATTTAAAAATGGCTTAGATACAGAG # Right flank : TAATAAATAAGTTTAAAATTAGTGTTTATTGGAAATATTATAAATATATATAATATTTTAAGTAAGGAAGATAAAACATGAATAAATGTATAAAAGTATCCATAAAGAATTGTAAGGAACTAGATTATAAAGTTATGAGTGAAAAATTAAGAAATATACAATACTTAACATGTAAAGCTAGTAATAAAGCCATGCAAATGTATTATATGTGGGAGAATCAGAAAATAGATATTAAGAATAAAACAGGAGAATATCCTAATGATAAAGAATTATTTGGAAAAACCTATAGAAATGTAGTTGAAGGTGAAATGAAAACTATAATGAATACCATAAATACATCTAATGTAGGTCAAACCAATGCAATTATAATGAAAAAGTGGAATACTGATAAAAAAGAAGTTCTATCATATCAAAAATCTTTACCTAATTTTAAATTAAATATGCCTATATACATAAAAAATAAAAGCTTTTCAATAGTAAAAGGTACAAGTGGATATGAA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.20, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAGAATCAACAAAGGATATGTTTAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [91.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 12150-12832 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMYB010000023.1 Clostridium botulinum C strain IZSVe-TV_9877_3_12 NODE_23_length_33894_cov_33.5531_ID_2525, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 12150 29 100.0 37 ............................. CTTGAAATTATGTGCTAAAACAATGGGTAAAATGTTT 12216 29 100.0 36 ............................. TGTCTGAGGTTTTCTACGTAATCACGTAGCTGTTCT 12281 29 100.0 36 ............................. TCTTTAACTGTTACAGTCATGTCATTGTTATCTACA 12346 29 100.0 40 ............................. TACTTAAAATTAACCATTACAACATCTCTAGTAGTTTCAC 12415 29 100.0 35 ............................. GTTAACTCTGCTATTTCTCTATTTGTAAAGTTTAG 12479 29 100.0 36 ............................. TCTTTCATCTTTTTTAGCAATCCAGTGTGTTGCTTC 12544 29 100.0 36 ............................. TTTCTATATAGACTATTATATATTTTTACTTTATCT 12609 29 96.6 37 .........G................... CTCATTCAGTTCACCTCTTGTTATAATGTTAAACTTT 12675 29 96.6 35 .........G................... TCTTCTAACATTTTAATTGCTTCCCATGTTTTATA 12739 29 100.0 36 ............................. ACAGTAAACCCCTTTGGTACTTCTGTATTTTTATCT 12804 29 82.8 0 ...C...........CG...A.......T | ========== ====== ====== ====== ============================= ======================================== ================== 11 29 97.8 36 GTATTAATTAAACTATATTAGTTATAAAG # Left flank : CTAACTGATACTATGCCTAAGGTTGTTATATTAGGTGAATATAAGTGGGGAAATAATGTGTTCCAAGGATTAATAAATAAAGATGGAATAAATATAGATGGACTTAAAGAAGTAATAGAGGAATACGAAGATTTTAGAAATAGTAAGATTTGGATAGGGGTTAGTAGTAGAATATTAAATGAAAATTTTCAAGGATTAAAGGAAAAGCTTGAAGAGGAACTGCAAGATTATGATGATGTTGAAATAGGAAGTGTGAAGAGTGCTTTTGATGGATATTTAAAATATTTAGAAAAAACGATGTAATATTATAAATTTTGCAGTGAACCTCTAGTAATGTTTTGGGTTAATTTTACAAATAGTGTTGTAACATAGATATACCAATGGTTGTAGAGATTTACTATAAAAAATGGTTCACTGCAAAAACACACTATTTATTTGAATTTTTAATGGTCAAAGTATGGGATTATATAGTATAATAGAGATATGAAAAGAAAAATAGG # Right flank : TAGATAATAAAATAAATAATCGTATAAAAAGAAAGGAAATAAAATATGAATGACTTAAGTGATAAATTAAAGAAATATAAAGCAAAATCAGATGATACTACTATATGTAAACATAATAATGATTTGTTTGTAGCTTTAGAACAATTATTAAATATACATTATATATCTGACGAATTAAAATCTTCGCTAAGAAAATGTATAAGTTATCATGATGTTGGAAAAGTTGTTGATGATTTTCAAAATAACATAGAATGTAAACATAGAAAGATTAGACATGAAATATTATCAGCATCGGTAAAAAATTTAAATGAAAGTGAGAAATTAAGTATATTATTACATCATAAAGTTTTAGATAAATTAGCTCAATTTATTAATAATATATATTATCAAGATAGTTTAAATGAAGTAAAAAATAAATTAAATATAGAGACAGAAGATATAACAGAATATTTAAAGAAAATATGTAGAGGTAGCAGAGAAAACCATAAAAAATTACATGA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTAAACTATATTAGTTATAAAG # Alternate repeat : GTATTAATTGAACTATATTAGTTATAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:86.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 15091-15779 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMYB010000023.1 Clostridium botulinum C strain IZSVe-TV_9877_3_12 NODE_23_length_33894_cov_33.5531_ID_2525, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 15091 29 100.0 35 ............................. ATGATGGAAGTAACTTAGATAGTTACGCGTCATAC 15155 29 100.0 38 ............................. TAAAATTCATATAAAACGCCTCCTTTATGCTACATTTA 15222 29 100.0 35 ............................. TCAGGAAACATCAAGTATGATAAATCTAAAAGTAG 15286 29 100.0 38 ............................. GGTATCCAGCTTTTTGTGCTTGTTTTCTAAAGTCTTTT 15353 29 100.0 38 ............................. TTAAAATGGAAAAGCCCAGAAGAACTTGAAAACAAAAT 15420 29 100.0 36 ............................. GCAGTAGAGAAACTATTTGGCGCCATTCTTATTCTT 15485 29 100.0 42 ............................. TATGTCTAAAGATTGAAGTTGTTCATTTATAGCATTTTCCTG 15556 29 100.0 35 ............................. GTAACCAGCAGGTGCATCACCTAACCAACCATTTA 15620 29 100.0 36 ............................. CTTGATACATGGTAGCTAAGTTATTCCAATAGTCTG 15685 29 96.6 37 ............................C AGTTACAAAATATGCAATTTTCATCGGTACTATTTCT 15751 29 89.7 0 .........G......G...........T | ========== ====== ====== ====== ============================= ========================================== ================== 11 29 98.8 37 GTATTAATTAAACTATATTAGTTATAAAG # Left flank : ATAAGTATAAATCACAAATACAATTTATAATTAATAGTATTAGAGTGGGATATTATAATAAAAATGCTTCTGAAGAAATGCTAAGCAATGATGATACAGTATCAGTATTGCCTACTAATTTATTAAGCGAATATGCTAAATTAAGAGAAGAAAAAAGATATATAGAAGCCAACGAATTATTTGTAAATGCTAAAAAATATATATCAAAATATAATAAAGAGTTTAAAATTTATATAACATATAGTGTATACGATTGTAGAGGATTAGTTTATGAAGAAATTGATATAAATAACCAAATAATTTAATATCTTATTTGCAGTGAACCTCCAGTAGTGTTTTTGGGTTAATTTTACAAATAGTGTTGTAACATAGATATACCAATATGTCTAGCTATTTATTATAAAAAATGGCTCACTGCAAAATTTAATGATTTTATACTAAAAATAAGATGAAAAATATGGAGTGATATAGTATAATAAAGATATGAAAAGAAAAATAGG # Right flank : TGAGTCATTAAAATCTATCTTTTATGATAATGGAAATTAAATTAAAGAATTTCAAAAATAACCGTTGACATAAATGGAAAACAGTAGTAGAATAATAAATGTGGAAAGAAAATATAAAGTTAGTATGGGTTGGAACATTTTGTTCAAGCCCTTTACATAAAAATATTAACAAAATTAAATTAAGTAAGAGGAGGAATTATATGACGAATAGTTTAATGATTTTTGAAGGTTCAGAGTTAGAAATTTTAACAAAAGAGGATGTAAATTTTGAGTTTGAAGGCACAGTTTTATTCAATGGGAAACAAGTATGTGAGATATTAGAGTATAATATAAACAACTACGCTAGAGAAATTACTAAGTATTGTGATGAAGAAAATGTTCAAGTAATTATAAAAGAAAGACTCAGTTCCAAAATGGAAGAGAGTTTAAAACTCAATCCGAATATCATAACACTGGGGCAAAGAGGAACAAAGTTTATAAATGAAGATGGTGTTTTTGAT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTAAACTATATTAGTTATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:86.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 43913-41986 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMYB010000014.1 Clostridium botulinum C strain IZSVe-TV_9877_3_12 NODE_14_length_57973_cov_99.9766_ID_2507, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 43912 30 100.0 35 .............................. AGGTAAAAAACACATCTTAAACCGTTGATATATAA 43847 30 100.0 35 .............................. TCCATATATCTCCTTCATTCATTTTTCCTATATCC 43782 30 100.0 34 .............................. TGTCTAGCGAAGTTTTATAATGCATGGTTTTTCC 43718 30 100.0 34 .............................. TCAAATCAAATCGATATTGTTTCTAAAGTATCAA 43654 30 100.0 34 .............................. TAAATCTTTACCCCACTGGAGCGTGCACCTATGT 43590 30 100.0 37 .............................. GAAGGAAATAAGATACAGGATTTTCCTTCACAAGGGG 43523 30 100.0 36 .............................. TTCAAACACTCCTTTAATTAGAAAAGGAGAAATAAT 43457 30 100.0 35 .............................. TTGTAAATGATGATGTATTATATTCAGAGATTACC 43392 30 100.0 35 .............................. GATATGGGAGTCGGAAAACACGCCCTTGTGATTGA 43327 30 100.0 34 .............................. TACTCTCTATTAATTCATCACTATGCTTTTTCAT 43263 30 100.0 37 .............................. TGTTGGCTATTTTGACAGAGCAGTTAAAAGTTCCGAA 43196 30 100.0 35 .............................. GTTATATATTTTATAATTTCTCTTTCTGCTTCTCC 43131 30 100.0 35 .............................. TAACGTAGATAAAGGTATGCCTGATGCACAATTTA 43066 30 100.0 36 .............................. TTCATAAAATCTTCATAAAAATGAACTAAAAACTGT 43000 30 100.0 36 .............................. TTTTCTAAGATTGATATTTGGCTGTTATTTTCCATA 42934 30 100.0 35 .............................. ATTTCTATAGATAAACTAGCTATATCTTTTTTAAG 42869 30 100.0 37 .............................. CAGAATTAAAAGGTGCGTATATTAAAGTAGGATTAAC 42802 30 100.0 35 .............................. TCTCCAAAAGTAGTGCTAGTTATTGGAACGTTCCC 42737 30 100.0 35 .............................. TTTTTGGTAGTTGTTCTTTCTTTACCTTTCCTTCT 42672 30 100.0 36 .............................. CTGTTTTTATGTCAATTCCCAATCTTTCTAGCACAA 42606 30 100.0 36 .............................. TTATAAGTAAAATTTTTATAAAAATTTAATATTTCT 42540 30 100.0 36 .............................. TTGTATAAATATATAGCTTTTTTCATTTTCAAGCAC 42474 30 100.0 34 .............................. TCTATAAAGTTATATTCTTTAGCTTTTTGAGCAT 42410 30 100.0 36 .............................. AAAAAAATGGACTGAACTTTGGAAAGACTGTTTAAA 42344 30 100.0 37 .............................. GCGCATATTCCTATTGTATTTGTATTATGTCCTTTGC 42277 30 100.0 35 .............................. AACTTATCCTTATCTTGTCCATAATCCATATCTAA 42212 30 100.0 37 .............................. AAAGGAGATTAATTTTTATGGATCTATTTGCATTAGA 42145 30 100.0 35 .............................. TTTTTATATTTGTTTCTAATAGCATCTGCTGCTAA 42080 30 100.0 35 .............................. AGTATTACATTAAAAGATACTACCGTTAGTTCTGC 42015 30 90.0 0 ....................C...C.T... | ========== ====== ====== ====== ============================== ===================================== ================== 30 30 99.7 35 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : AAGCCATTTAGGCTTAAGGATAAGATATAATGAGTAAAAAAATTAATTATAATTATGCATTTTTATTTTATGATGTGAAAGAAAAGAGAGTAAATAAAGTGTTTAAGGTTTGTAAAAAGTATTTAACTCATTATCAAAAATCTGTTTTTAGAGGTGAGATAACACCTTCTAATATAATAAAATTAAGAGAAGATTTAAAGAAAGTAATAGATGAAAGTGAAGATTTTATATGTATAATTAAATTATTAAATAATAAAGTATTTGGAGAAGAAGTGTTAGGAGTAGGTATTGAAACTGCAGAGGATTTAATTTTATAAAATTATTATCCCAACCGATTAAAAAATTCAAACTAGTCCCAATCCTTGATTTAACTGTTTTTGAGTGGTATTTTGGTTTAAAAAATTAAATTATAAAAGTTGGTTGGGAAAAAACTAACGAAAGTGTTTATTTTCAATGATCTTAAAGGTATAATATAAATAAGGAATAGCTATTTTACTATG # Right flank : AAAAATTAGTTAAATACTAATACAACAGTTTAAAATACCCCTATAAGTAAAAACTTATAGGGGTATTTTAGTTATCTGGAGTAATTAAATTTATATTGTGTTCTTCAAAAAACTTAACATACTCTTTAGGTGGAATCCTATCTGTAATAAAACAAGTAATATCTTCTAATTTACAATAAGTTTTAAGAGAAGCTGTATCTAACTTTGAGTGATCAGCTAAAAGTATTACATTGGAACTATTTTCAACTACTGTTTTTTTTACTTCATATTCAAAATTAGATGAATTTGTAACTCCTCTATCAATAGAAAAACCTGTAGTGGCCATAAATGCTTTGGATATATTATAATTCTTTAAAAAATTCGAAGCTTCTACACCAATTAAAGAATTAGTTTCTCTAAAAAGAGTTCCTCCTGTGGATAATATATCTACATTTGAATAAGGCAAAGCCTTTAGTAATATATTAAGATTGTTAGTTATTATAGTTAAATTTTTTCTATCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //