Array 1 33636-35619 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEDN01000004.1 Kocuria rhizophila strain DE0203 NODE_4_length_203914_cov_38.965428, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 33636 28 100.0 33 ............................ GCGGAGATCGAACCCCGCCTCCTCGAATGGGTA 33697 28 100.0 33 ............................ CAACGCGGCCTGCACATAGTGCGCGGCACCGTT 33758 28 100.0 33 ............................ CGGGCGGGCCGGCAGGTTACCGCCACCATTCAT 33819 28 100.0 33 ............................ CGTGCAGGTCCATGTGAACGCTGCGGGTGCGAC 33880 28 100.0 33 ............................ CAGGGCGGGTCCCCGTCCAGTGGCGACGAGTCA 33941 28 100.0 33 ............................ GGGCAAACTGCAGGGCGACGACGTGAACCAGCT 34002 28 100.0 34 ............................ CCAGAGTGCGGCGGACACGGTACGCGCACCATAC 34064 28 100.0 33 ............................ ACTGGCGATAGCACGCCCGGTGGCGGTGTCCAC 34125 28 100.0 34 ............................ GATCGCGCCGGCGTCCTGCATGGAGATCCCCGCG 34187 28 100.0 33 ............................ CGCCGGGATCCTCACCGGCGCGAAGGTCGTGCT 34248 28 100.0 33 ............................ TCCGGCACGGTAATCCTCCATGCCGCAGTATTC 34309 28 100.0 33 ............................ CGTCGGCCAGGAACCGGACCTCGCCGCGCTCAT 34370 28 100.0 33 ............................ CGGGGACGCGCTCACGGTCCACGATGCCGGGGT 34431 28 100.0 33 ............................ ACGCGGGTGATGAACGCCTCCGCGCCACCCAGG 34492 28 100.0 33 ............................ GCGTGACGACACCTGGTTCTCGCAGCTGAACCG 34553 28 100.0 33 ............................ GTCGTTGACCTTCTGCCCACCACCGAAATACGC 34614 28 100.0 33 ............................ CGTGAACTTCGGCTTGGACGTGAGCTGCTCGGA 34675 28 100.0 33 ............................ GTGCTCAAGCGTCGGCCGCTGCGAACCGGTACA 34736 28 100.0 33 ............................ GTACACCCCCGGGTCGAGGTGCAGCTGCTCACA 34797 28 100.0 33 ............................ GTCGGAGCAGGCGAACCGGCGGTCCGAGTCTGC 34858 28 96.4 33 .........................A.. GTCAGCCATGATTAGGGTCCTGTCCTAGTCGTG 34919 28 100.0 33 ............................ CCGGGCTGTGTCCGGGATGCAACGGGGCATGGA 34980 28 100.0 33 ............................ GTCAGCCATGATTAGGGTCCTGTCCTAGTCGTG 35041 28 100.0 33 ............................ CCAGAACGCGGACGACTTCGAGTACAACCGGGT 35102 28 100.0 33 ............................ GGACAAGGAGACCACGTGGGACGTGATCCACGA 35163 28 100.0 33 ............................ GTTGATGGACGCCAGGATGTTGTCCACAGGGTC 35224 28 100.0 33 ............................ GCCCATCAAGGACTGGATCACGGGCATGGTCGG 35285 28 100.0 33 ............................ CAAAGGCTGGCTGCCTGAAACCATCGACGCCTA 35346 28 100.0 33 ............................ TAGTCGTACCGTAACCCGGTACCAGTGGGCGGC 35407 28 100.0 33 ............................ CTTGAGCCCGTTGCGCGCGAGGAACCGGTCGGG 35468 28 100.0 33 ............................ GGGCAAGGACTGGGCCAACAAGAACGGGTCCAT 35529 28 100.0 33 ............................ GAGCTGCTCCGGGTTGGCGCCGTTGCCGGAACC 35590 28 96.4 0 .....................G...... | TA [35614] ========== ====== ====== ====== ============================ ================================== ================== 33 28 99.8 33 GTGCTCCCCGCGCCTGCGGGGATGAGCC # Left flank : CGACGACGCCATGTCGCTGTGGTCCGGTCGGCATGAAGGCCGCATGCCGACGGGGCAGAACTTCTCTCGGGAGAACTCATGATCGTCTTGGTCCTCTCAGCCTGCCCGGTAGGGCTTCGTGGGGACCTGACAAAATGGCTGTACGAAGTCTCTGCCGGAGTTTTCGTGGGTAAAGTCAGCGCGCGGATTCGGGAGCACCTGTGGGAGCGAGTGCTGGAGTCGTCTGGCTCGGGGCGGGCCATCCTCGTGTGGCATGCCAGGGGCGAGCAGGGCTTGACGTTCTCTGTCAAAGACCACCACTGGGAACCGGTGGACCTCGATGGGGTGACCTTGATGAAACGCCCCTCGCGCACCAAACCCCGATCTTCTCCCGAGCTCAGGCCGGGGTGGAGCAAAGCCGGTGCTCGTCGCAGGTTCGGCGGCAAAAAGACCTGACCGCAAAAGTGTCGAAGTCAAAGGAAAAACGCCCCTCGGGGGACAATAACCCCTAGTCACCAAGT # Right flank : CCCTCAAGGGCTGCTGAACCTGACCGTGAAACTGCGTCCTCGCCACAGAGGGTCAACTGCAAGGGGCACGCCATCTCCGGTCAGCGTGAAGCGACCCCCATCAGGCTCCTCAAGCAATTTAGTTGTGGACAACAAAAACGCACGCAACTATGCTCTGTCACGCCCGCTCACCGCAGCAGCCGATCCCCCAGGCTGCACATCCGGGCGGCCAGGGACCGCTGGCGTGGGCTCTGGATCACCAGCGTCTGCGCGCGGCCTCGGTTGTGGCGGGTCTCGACACTTGGGGGGTCGAGACCCGCCAGGTTCGCCAGCACGAAGGAGTCGTCATGAATGTTCTGCACACCTCTGGTCGAAACTTGCACCGCGGCACACGGTCGAAGAGCCCCGCCAAGCTCTCCCCCGCCCGCCACATCGTCCGCACCGCGCTCGGCGGTTTCCTGGCCTTCGCGGGCGTCAGCCATCTGACCTTCGCCCGTGACGAGTTCCAGGCGCAGGTGCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //