Array 1 189066-186478 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOGO01000005.1 Streptomyces qinglanensis strain CGMCC 4.6825, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================== ================== 189065 28 100.0 33 ............................ CTGCTGGGCGTCTTCCGGCCGGGGGACATCCAC 189004 28 100.0 33 ............................ CGGCAGCCGCTTGAAGTGCCGCAGGGTGTGGGC 188943 28 100.0 33 ............................ TGCCGCCCGGCAGTCTGGGGCCCGGCCGGCCCC 188882 28 100.0 33 ............................ GTCCTGGACTACGGATTCGTGCTGAGAAGCGGT 188821 28 100.0 33 ............................ GCGGTGATGGAGCGCGTGGTGGGTCAGGCCGCG 188760 28 100.0 33 ............................ GCATCGACGACCAGGCCACGCTCGCGTTCGCCC 188699 28 100.0 33 ............................ GCGGAGCACACCACCCTCGATGCGCTGCTGGAC 188638 28 100.0 33 ............................ GAACATGACGCGGTCGACCGCGAAGCGCTCCAT 188577 28 100.0 33 ............................ GCCGAAGCCGTCCACGTACAAGCTCATGAAGAC 188516 28 100.0 33 ............................ TCGGTATCTCCGGTACCTCCGCGCCCAGGACGA 188455 28 100.0 33 ............................ GCCCCAGGGGTCGCCGCTGCGGCGTCCAGGACG 188394 28 100.0 33 ............................ GCGCTGGGACGACGGTGCGATGTCGTACGCGAC 188333 28 100.0 33 ............................ GCGTACGACGAGGCATTCTTCTCCCGGGGCAAG 188272 28 100.0 33 ............................ CACCTCTGCCCCTCGCCATCGGGGCGCACCTCG 188211 28 100.0 33 ............................ GACGGGGTGCTGGAGAAGAAGTACGGCACCAGC 188150 28 100.0 33 ............................ CCTCTGCGCACTGCTCGGTCGTGCCCGTGCTCC 188089 28 100.0 33 ............................ CCTCGGGCATCACCGCCTGCCGGGGCTGCGGCC 188028 28 100.0 33 ............................ CTGCGCCCCGCTGAACGAGGCGTCGCCGGAGAA 187967 28 100.0 34 ............................ GTGCATGAGCACCTGTCACTCCCCCCCCGAAGTC 187905 28 100.0 33 ............................ GCCCACCGCCAGATGGTGCCGACAGGCTGGCCG 187844 28 100.0 33 ............................ GGTCACGCACCTGCTGTTCCAGGTCCGCGATCC 187783 28 100.0 33 ............................ CCCTCTGTCAAGTTCAAAGGTGTGGCCCCGCCG 187722 28 100.0 33 ............................ CCCGCCACTGGCAGGGAGGAGGACTCCATCGAC 187661 28 100.0 33 ............................ CGCGACTTTCCCCAGCTCACACCGACGTACCAC 187600 28 100.0 33 ............................ CGCGCCTTCCCCCACGCTCAGCCCACCGGCCTG 187539 28 100.0 33 ............................ CCACCGGCTGTGCGGCCCGATGATGCTGGCGTT 187478 28 100.0 33 ............................ GTTGCAGCGGTTTCGGGAGAGGGGGCCCTACGC 187417 28 100.0 33 ............................ CCGCCACGGGCTGCTGTGGTGCATCGTGCAGGC 187356 28 100.0 33 ............................ CTGGGCGAGGGTGATGCCCGCGCTCTGCTCGGT 187295 28 100.0 33 ............................ CGACTTGTGGGTGTCGTACCGGACCTTTTCCCC 187234 28 100.0 33 ............................ GACCCACCTCGCCGAGCACACCAGCTCCGCCGC 187173 28 96.4 33 ........................C... CTCGGAGTGCGGGAGCCGCTTGAGGCAGTGCGC 187112 28 96.4 33 ........................C... GTCCTCTCCGGTCCGGTTCGGGTTCCGGTAGTA 187051 28 96.4 33 ........................C... GGTGAGCGACCTCGCGTCGACGTTCGATCTCGA 186990 28 96.4 33 ........................C... CCGACGTCACCCGCCGATACCGGTCAGCCGCCA 186929 28 96.4 33 ........................C... GGCGGAGGACGGCATCGCCAAGCTCCAGCGGTT 186868 28 96.4 88 ........................C... GGCGAGCACCGACAGGGAGGAGTTCGGGGCTCTGTCGACCCCGCGCCGATGCTCCGCCGCCGTTGCCGCCCCGTTCGGCGTGCACTCC 186752 28 96.4 33 ........................C... GTGATGGCACGCAGCATGCACGAGTCGGCGACG 186691 28 96.4 33 ........................C... GGGCGGCGGGGCCGGGTGCCCAGTGCTGGGCAC 186630 28 96.4 33 ........................C... GGTGCCGAAGAGCGAGAAGCAGTCCTTCACGCT 186569 28 96.4 33 ...................A........ GGCGCAACGAGTACCCAGCCCACGCGTGCGTTG 186508 28 78.6 0 .............G..G..AC.....GA | GC,C [186482,186485] ========== ====== ====== ====== ============================ ======================================================================================== ================== 42 28 98.6 34 GTCGACCCCGCGCCCGCGGGGATGTTCC # Left flank : ATCGAAGACGTCAAGACCCTCCTCACACCAGACGGCACCGACATCGACGACGCCGAAGCACACCTGTTGTGGGACGAGCACCTCGGCACCGTCCCCGGAGGCACCGACTGGTCCGCCGAGGACACCCACATCGCCGTCATCGGCCCCGAAATCGACGAGAGCGGACCCGCCCGATGACGGTCATACTCCTCATCGCCGCCCCCGAAGGACTGCGCGGCCACCTCACTCGCTGGATGGTAGAAGTCAACGCCGGAGTCTTCGTCGGCAACCCCAGCCGCCGCATCCGCGACCGACTATGGGAACTGCTGGCCACCCGCATCGGAGACGGCCAAGCAGTCATGGTCGAACCAGCCGCCAACGAACAGGGCTGGGCCACCCGTACCGCAGGTCGCGACCGCTGGCGCCCCATCGACTTCGACGGCCTCATCCTCTCCGCCCGCCCCCGAACCCAACCGAACGAAAACACCCCCACACCGCGATAAACCCGCTGCTCAGCAAGT # Right flank : TGTTCTTCTGGCCATTAGCAAAGGACGGAACACCCCCGGGGCTGATGCATGGTCTGGTGACATCTTGACCTGCCCCACGTCCTGGGTTCCAGATGTGGTCGCTAACTGGCAGCCCTTCGCGAAAGGCTGTCAGTCATGCCTCGTCCCTATCCGCCGGAGTTCCGGGCGCGTGCCGTCGCGCTGGTCCGTGCCGGCACGCAGGCCAAGCAGACCGCGGTCGAGCTCGGTGTCCATCCCGTCACGCTGTCGAAGTGGTTGCGGCAGGACGACGTGGACAACGGGCGGCGACCGGGAACTCCGTCGAGCGAGTCCGCTGAGCTGCGGGCTGCCCGCCGGCGGATCCGCGAGCTCGAGACCGAGCTGGGCATCGTCCGGCAGGCGGCGAAGTTCCTCGGCGAGGACACACCCCGCCCAAAAGGCTCCACCCGATGATCGACCGACTCGTCGATGCCGGGGCTCCGGTCGACAGGCGCTGCCGGATCCCCGGGGTCGCCCGGCAG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACCCCGCGCCCGCGGGGATGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGACCCCGCACCCGCGGGGATGGTCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 199765-198942 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOGO01000005.1 Streptomyces qinglanensis strain CGMCC 4.6825, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 199764 28 100.0 33 ............................ CACGGGATCGTCGGCTACGTCCGCGTGTGGGAG 199703 28 100.0 33 ............................ TCCCGGCTGTCCCCCCGCGCCCCCGACTCGGCA 199642 28 100.0 33 ............................ CGACGATCGCAACGACGCTGGGAGCCTGACATG 199581 28 100.0 33 ............................ CTTTTTTCTACCCGGGACGAAACAAAAATAAGG 199520 28 100.0 33 ............................ CGCTCAGGTCATGGCGGACGGGCTCGCGGACAA 199459 28 100.0 33 ............................ GCCCACCATGTCGGGCAGCTCGCCGGGCATCCC 199398 28 100.0 33 ............................ GATCGGGTTGGAGCTGTCCCGGCAGGACCTCAA 199337 28 96.4 33 ............T............... CTTCCTTCCGGTGCGGGCCTACGCCGAGCAGAC 199276 28 100.0 33 ............................ GCCCCTGCGTTGGCTGTGGGGCCGCCTCGGTCG 199215 28 100.0 33 ............................ GCTCCTCCCGCCCGGCTGCCCCGCCCTCTACCA 199154 28 100.0 33 ............................ GGCGCCTGTCCGCTTTTGCCTCGGCAGGTCCGG 199093 28 100.0 33 ............................ CAGCGCGAGCGTCCACGGCAGAGGCTTCCCCTT 199032 28 96.4 33 ...........G................ GCCTGCGCCCGCCCGCGCCGCGTCGGCTCGGCC CA [199025] 198969 28 89.3 0 ..........TG..............T. | ========== ====== ====== ====== ============================ ================================= ================== 14 28 98.7 33 GTCGACCCCGCACCCGCGGGGATGCTCC # Left flank : CGGGCGGCCACGAACCGCACCCAGGCAGCAGCCGGACTCCGAGACAGCGCGCCGAAGCCGCAGCACGGCACACCGCTACCGTGGGATGAGATCGCCGCACTCGTCCGAGCAGCCGGGAACTTCACGGCGGCCATCCACCAGGCCGACTCCACGGACCAGGCCGAGCTCTGCAAGAAGCTGGGAATCCGCCTGCGCTATGACCCCGCGCAGCAAAAAATCCTGGTCGAGAGCCATCTCGACCAGGACCTGAGCGGTTCCCGTGGGGTACCAGTACGTGTCGGGAGGGCGTATCCGACCATACGCACACACTGGTGGCGTTCGGGGCGCTGGACGTGCGGCAAGAGTGACCAGTGCGGCGGTGCCGCGGGTCTTGCGTCGACTCTTCGATCGTCCCCGTCTCGCGGCCTCCGCCGAGTCCGGCGCTCCGGAGCAGCCTCACTGTGGAGAAGCAACTGAATGAAATAGGCTAGGCCACTGCGCAAACGCTATGGTCAGCAAGT # Right flank : GAGGGGCGGCGTCCATGGTGATGCCGAAGTCAGCTCGACCCCGCCCGCGGGGCCGGTCCGGCGGTGGGTTGCCGCGAAGGCCGCTGCAGCGACCTTCGCGGGCGTGGGATGGTCTGGAGTCTTATCACGCCACCGCTTCTTCCTTCCTCCACAGAGGGACGCTGGTCTTGAGTTGGTTCGTCGAGGCGTTGGACCGAGGGCCAGTCCTTGCGCGCCGGGGTTCTCCGCCTCTTCGGGAAGCCGAAAGTGCCGGGATGCTCGCTGGCTGGCGCGCAAGAGGGAGTGGACCGGTGGTGGTGGGGTTCCGGCGGCATCGGGCTGAAGCAACCTCGATTGTCAGTGCTGGCATTTACGCTCCATGCCGACGAGTTAGGGGAGGAGTGGGTGGCTGTGGAGCGATGGGGGTACGCCGCCGAGCTGGGGGTGTTATGGGGCAAGTCGAAGGAGCGGGCCGGCGGGCGGATGAACCTGCTGATGTCCCACCTTCTCGATACGGGTGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 221640-221851 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOGO01000009.1 Streptomyces qinglanensis strain CGMCC 4.6825, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 221640 29 96.6 32 ............................C TCGTAGTCCGGTTCCTTGACCAGCCTCAGGGC 221701 29 100.0 32 ............................. GAGTGGAAGCGGCCGCTGGTGGTGCCGTCCTG 221762 29 100.0 32 ............................. TCGCCGTTCTGCTGGCACGCGAACCCGCCGAA 221823 29 96.6 0 ........G.................... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGGTCCCCGCGCGAGCGGGGGTGGTCCG # Left flank : CGGCGGAATCGCACCGCTGAGGTTCGGTGTCCAGCGCATGGCCCGGCAACCGTCGACGGACCGCTCACAAGCCTCCTGAACCACGGCGCTGACCACTTGTGTTCACCCGGGTGCGAGAAGAAGCGTCGACCCCACGCGCGCCGAATGCAGCAGGCAGCCGGACCGGCCGATCCGCACACAGGTCGGCGCAGGGACCAGCGCCCAGTCTCCAAATCTGCCCCGCTCAGGGCAGGCGGGTCCTCCACGACCGCGACTCGACCGAGCGGGGAAACCACGACGCGCTACCGGACCACAGCTTGGCTCACGCCGGCCCTCCCCCTGTTCGACCTGCGCTCCCTGGCGGCCGCCATGCCACTGAGACGCCCCGAACGACACCCGGCCCGAACAGGCTCATGGACCATCCACCCGTGGCACCGGCTCTCTGCCACCATGGACCAATGACAAGGATCCACAATGACAAAGAACTGGCAAAGCCCCACTAGCAGGGCAGGTCAGGAAGT # Right flank : GTGGCGGCGTCTCGCCGACGAGCTAGTCGCCAAACACTGCCCTGAAGCCGACAAGGAGCCGGGGCGCCGTTCGGCGGGGTCCGGCAACCGCGCAGCAGGCAGGCGCCCATCACGGCCCATTCCGAGGACAACCGTCCGCTTATACCTGACTGTGCGTCAAGTTCGACCAGCGCATATCCAGCGACCGTACGGACAACGACAGGTGATGACAGGTGACGCGACGTATCAGTTTCACCCAGCGACCAACCAGCGAAGGAAGACCCAGCGGGGTGGGCCCAAAATGGGCAAACCCCGCCTGACCTGCTAGTTCGACTGGGCAAGGAAGGCCAGTCAGCCGTGCTCGCTACACATTGAAGCGGAACGTCGACGGCATCGCAGTCACCTGCGAAAACGCGCCGCTGCGGGACAGTAAGCAGCACACAACCAGCAACCGTCGACGGTCCACACGCAGTTCAACGTGGGATAACCGCGGTCTCCGCATCTCTCCTGCTCGGGGCAGG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGAGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCTCCCCGCGCGAGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //