Array 1 47668-45962 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWXL01000069.1 Caproicibacter fermentans strain EA1 CAFE_69, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 47667 33 100.0 36 ................................. CATACATGTACATAGCCGTCGTGATGCCAAGCGTCC 47598 33 100.0 34 ................................. TTCATAGACAAGTGACACAGAATGTTGGAATAAA 47531 33 100.0 34 ................................. TCATATGCAAGCCTTTAAACGTCCTGCTGTTCGA 47464 33 100.0 34 ................................. CATACGGCGGCAACATTGCAGACTACGAAGAAAA 47397 33 100.0 33 ................................. GTTACCGATACCGAGCAAACGCAGTTAGAAGGG 47331 33 100.0 34 ................................. CCCGGAGCGCTGGCTTTGTTGCCTACAATGGCGG 47264 33 100.0 33 ................................. TTGCAGACGTATAAGGGTAAACTGTTATTCCCG 47198 33 100.0 33 ................................. GGCAAAAACCACAAGCAAGTACATCAGACTATG 47132 33 100.0 34 ................................. AAAATAATCATAATTTATGTATAATCATAGGTGA 47065 33 100.0 33 ................................. CATCAAGCAGCTTTGCAATGATCAGCAACACAA 46999 33 100.0 35 ................................. GTAAATCTGATATAACACAAGAAGAAGAAGAAATA 46931 33 100.0 34 ................................. GTGTACTGGAAACAGTTTAAATCGATTATATCGT 46864 33 100.0 34 ................................. TATCACCAGTGAAAACAATTTTGATTCTACAGCC 46797 33 100.0 34 ................................. TTTTATCAATCCATCCTGATCCACTGCAATCAAA 46730 33 100.0 34 ................................. AAACGCATAGAAAACAAGTGCAATAAATACGGTT 46663 33 100.0 34 ................................. TGTATCCTAATTTACAGTAAAGGAAAGACGATAT 46596 33 100.0 34 ................................. TCATATCTTCAGACAAATCATCAAAACGCTTGCC 46529 33 100.0 34 ................................. TACAAAGCGAAGTAAAAAATTGGAATCTACATCA 46462 33 100.0 34 ................................. GCGCCTGATGGTCCAGTGGGCCGCACGGATTATG 46395 33 100.0 35 ................................. GATAATGCGGTTTGTGGGAGGAAACAATAATGTAT 46327 33 100.0 33 ................................. CTTACTCCGGCGCAAAGAATGCAAGGATATTAT 46261 33 97.0 35 ....................T............ CGGAACTTCGGTTTGCTGCCGGTTACTGTGGACGC 46193 33 100.0 33 ................................. CGACTGCCAAAGACGATCCCGCCAATGTCGCTA 46127 33 100.0 33 ................................. GTATTCCGGGCCGTATGACGATGAAGTACCGTG 46061 33 100.0 34 ................................. AAGCCGTGGTGGTGCGGGTGACAGGACTTGAACC 45994 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 26 33 99.9 34 GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT # Left flank : TGGCCAAATATATTCGGGGTGAAATCGAGACTTATCCGAATCTTGTCTGGGGGTAGAATATGTTTGTCATTGTCGCCTATGACGTGAACATCACTTCCGAAAAAGGCAAAACACGGCTGCGAAAAGTCGCAAAAGAATGTGTCAATTACGGTCAGAGGGTACAAAATTCGGTGTTTGAGGTTAATCTCGACTACGGCAAATTTTTACAGATGAAAGACCGTCTTATCAAGCTGATTGACCCTGACAAGGACAGCCTGCGTTTTTATTATTTGGGGGATAACTGGAAAAAGCGTGTTGAGCATATCGGTGTGAAACCGGGATATGACAGCGAGGGGGTGTTGATTTTCTGAGTGCGAACGTGCGGTGACTGCAAAAATACCGTGCGGTTCGCGGATTAGTTTTTGTCCATCTCCATAAAGGAATCTTCATAGCAGATAGATTACTTGTTATTGTTGTCCGCCCCGTATGCGGAATGCAACTCCATATGCACAATATATAGA # Right flank : GCAAGAATCCGCAACGAAAAAGAAAAAAGCGGCCCGCATGTTCATTTAGCCGTCTTCGAACCGGGATAAGATGGTTTATGTATGATGAAACAGTCTTACAGCAATTCCAGTTGCATTGTAGAATTTTCTTATGTCCATATTTGCAATCTAAGTTCGGAAAAGCTTTAGGATGCATGCTGTCACAGATGATGCTCTTCTGTTCAGCCAACGGGGTCAATCACGATTTTTCCGTCCGCTTCAATCGGAACGGCGCCCGCGTCCCGCAGGACAACAGCGACAGCGGCGTCCAGCCGCGACGGGAGCTCCGGCCATTTCAGGGAAGCCTTGAATTTTACGGATTCATTATCGGATTTGAGCAGTTCTTTCACGATTTCCCCAATGGTTGCCCGGCCGACCCGGCGATGCGCGGCAAGAATCTCTTTTTTCATCTCTTTATAGTACGTGCAGAAGAAGTCAAAGAAGGCCTCGCTGTCCGCACTGTTGGCGGTGTACATTTCCAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.30,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //