Array 1 26102-26308 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVOJ01000019.1 Sanguibacter keddieii strain 250_SKED 744_26300_789669_145+,...,133_, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================= ================== 26102 24 100.0 39 ........................ GGATCCGGCCACGAAGGTCATGAAGACCGGGTGGGTCGC 26165 24 100.0 36 ........................ CACCGGCAGCGGCGCGATGGCTATTGGCTGGGTCAA 26225 24 91.7 36 .........TA............. GAATGCCTCGGGCAAGATGGTCACCGGCTGGCTCAA 26285 24 91.7 0 ..TG.................... | ========== ====== ====== ====== ======================== ======================================= ================== 4 24 95.8 37 CGACGGTGGCTCCTGGTACTACCT # Left flank : GCGTCGCCGCTGGCCGCGATCGACCTGCACGACCCGGCCGACGGCCTGTGGTTCTACCGCCACGTCTTCACGGACGCCGAGGGGACGGTCGGGGCCGACGGAACCTACACGTACCACGTCGAGGTTCCCTTCAAGGACATCGACGCCGCGTGGGCGTACCAGGGTGGCTCCGGCACCGTCATCGCTCACCCCTACCTGCTGGCCTGGGATTACGGCCTCAACCACTCCGAGGCTGCGACCCTGAACCTGCCCAGCGATAACACGGGCACGACCGACGCCTGCGCAAGCACCGACGGCGGCCACTGGGTGAAGGACGGAGCCGGCTGGTGGTACGCCTGCGCCGACGGTACGAGCTACCTCAAGGGTGGCTGGTACACGATCAACGGTTCGGACTACCTGTTTGGTCCCTCCGGCTACATGGCGACCGGCTTCCTCAAGCGTGCCGACGGCCAGTGGGTCTACGCCAACGAGTCGGGCTCCTTCGTGGGTGGCTGGGTCCG # Right flank : GTCACCCTCCGGCGCCATGCTGACGGGCACCCAGGTCATCAACGGACGCACCTACGT # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGACGGTGGCTCCTGGTACTACCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 19039-12471 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVOJ01000040.1 Sanguibacter keddieii strain 250_SKED 774_23725_679136_569+,...,392+, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 19038 36 100.0 28 .................................... AAGACAAGCCAATCCTTTCGACTAATGT 18974 36 100.0 28 .................................... GCCCACGCCGTCTCCTGAATATTGTCAA 18910 36 100.0 28 .................................... TCCGTCCACGTCGTAGTAATCGAAGCCG 18846 36 100.0 28 .................................... GCACGGGGCCCGTGTGCGGCGCGGGGGC 18782 36 100.0 28 .................................... CGCCCGATAGCCTGTCCGATTGGCTCGA 18718 36 100.0 28 .................................... CTCCCGGCCGCGCCGCTTTGACTACTCT 18654 36 100.0 28 .................................... CGATCCGTCGAATCTCGTCTTTGTGCCC 18590 36 100.0 28 .................................... ATGAGGAGGTCCCAGTTATGCACGTCGT 18526 36 100.0 28 .................................... TGAAGCTCACGGTCCTGGAGCCGGTTCG 18462 36 100.0 28 .................................... TGGCCGAACGCCTCCTGCACGACCGTGT 18398 36 100.0 28 .................................... CGTGGACGGCGGCGAAGGTCGCCAAGGC 18334 36 100.0 28 .................................... TAGAAGTTGCAGCCTCGCGGGCAACGTC 18270 36 100.0 28 .................................... TGCGGCGTCAACGGCGGCGCGGAAAGTC 18206 36 100.0 28 .................................... TCGCCTGGGTGCGCGTACCGCTCATGCT 18142 36 100.0 28 .................................... TAGGCGTTGCGAGCCTATACGTGAGGTC 18078 36 100.0 28 .................................... CTGGGTGGAAACGAGAGCGGTCGCGTCT 18014 36 100.0 28 .................................... TCGCGCTGATGGGGTCGAAGGTTGCGGC 17950 36 100.0 28 .................................... CTCGCGACAGGTGGGTGAAGCTGCGCCC 17886 36 100.0 28 .................................... CATGTGGGGCGCGTGTGGCGTTGTTTGC 17822 36 100.0 28 .................................... TGGTCTGGTATCCCATGCGCAACATGGT 17758 36 100.0 28 .................................... GACGCCGTTGCCGAGCATCCTGAGTTGG 17694 36 100.0 28 .................................... CCATCAATCGGTACGACGACGGGCCGGT 17630 36 100.0 28 .................................... GCCGAGAGATCGAGCAGATGACGGAGAT 17566 36 100.0 28 .................................... TGTCGGCGCTCAGGGCGATAGCGTCCCG 17502 36 100.0 28 .................................... CTTCGCGCGCGAAAGCGCCGTGGGCGTC 17438 36 100.0 28 .................................... AACCTGTACGACGCCATCGACGCGGCGA 17374 36 100.0 28 .................................... GGTAGGCCTGAATGAGGCCGGTCATGGA 17310 36 100.0 28 .................................... CGCGGACGGTGAAGGAGACCGACGAGTG 17246 36 100.0 28 .................................... TGCGGGAGGTGCCGGGTCTAGGGGTCAT 17182 36 100.0 28 .................................... TCGGTGGCCTCGCACACGACGTAGGTCC 17118 36 100.0 28 .................................... CGACGCGGCGCCGGAGAAAATCTGCGCC 17054 36 100.0 28 .................................... TAGAAGTTGCAGCCTCCCGAGCCACGTC 16990 36 100.0 28 .................................... CGTCGGAGGCCCACCAACCGAGGCGCTC 16926 36 100.0 28 .................................... AGCGCTCGCGTAGGTCGTCGGTCGCGCG 16862 36 100.0 28 .................................... CGCCCCGGTGACCCAGCATCCCTGAAAG 16798 36 100.0 28 .................................... GTCACCGCATCGGCGCACAAATTCGCGT 16734 36 100.0 28 .................................... CCACGGAGGCGGACGAGGACTCTCGCGC 16670 36 100.0 28 .................................... TGATGAAGTTAATCGGCTTCGCGACCAC 16606 36 100.0 28 .................................... CTGATCCAGTCGAACGCGGTCGAGAACA 16542 36 100.0 28 .................................... TGCGCGGGGACGAGGGTGATCCGGCTCG 16478 36 100.0 28 .................................... ATCCGAGCGTCGGGAACTCATCGTCCTC 16414 36 100.0 28 .................................... CGACGACGCGACCTCAGCGGATTCTTCG 16350 36 100.0 28 .................................... TCACGTCGGTCTTGTCCGCGTAGGCGGA 16286 36 100.0 28 .................................... CGGTGCAAGCCTGGGCGCAGTCCGAGGC 16222 36 100.0 28 .................................... ACGGCACGCATGCCCCTGGTGCTGGTGC 16158 36 100.0 28 .................................... CGTACCTGGCGGCGACGTAGCTTGCTAC 16094 36 100.0 28 .................................... TTCTCTAGGGGGTCTCGCCCTGCGCGCT 16030 36 100.0 28 .................................... CCACGCCTCGACGGCGTCGGCGCTCCAC 15966 36 100.0 28 .................................... TGCGCTGCGAACTGCGTTTGTCTGGTGT 15902 36 100.0 28 .................................... TGTCGTTCAACAGGGTTTCGAGGCCGCG 15838 36 100.0 28 .................................... CTCCGGGTTAGGAGACGGCTCAGGGCTA 15774 36 100.0 28 .................................... GCCGGCATCACGGAGAAAACCTTCACGT 15710 36 100.0 28 .................................... CCACCCAGGAATAGCGCTCACCCCACAG 15646 36 100.0 28 .................................... ACACCACCGTCAAGGACGTGAAGGCCCT 15582 36 100.0 29 .................................... TCACCCTCGGCCTCTACGAACTCCACTGG 15517 36 100.0 28 .................................... CTTTTCCTAGACCGCACCAAAGAGGGCC 15453 36 100.0 28 .................................... CGAATCCCTCGACTCGCTCCCGCGCCCC 15389 36 100.0 28 .................................... CGGTCGACACGCCGGCCTTGGCGAGCTC 15325 36 100.0 28 .................................... GGGTCTGCCTGTCCCACAGCTTTTCGGT 15261 36 100.0 28 .................................... GGGGCGCTCCGTGGGGGGTGACTTCGAC 15197 36 100.0 28 .................................... GCGCGGCCACGAGGGACACGCTGGAGGG 15133 36 100.0 28 .................................... TCGAGCAATTCCTGCGGCAGCGTCCGTT 15069 36 100.0 28 .................................... ACTATGACTTCGATAATGCAACGGCGCG 15005 36 100.0 28 .................................... TGGTGTCGTCCCCATGCTCGGGGGCGTC 14941 36 100.0 28 .................................... CGCCCATGCAGATGCTCGCACAGATCGC 14877 36 100.0 28 .................................... CAGCCCACGGCTTGTGCTCGCCAACAAG 14813 36 100.0 28 .................................... TCCGTCACAGCAGACAGGTCTTCTCCAA 14749 36 100.0 28 .................................... GTATCCTAGTGCGTGACGCGTGACACGT 14685 36 100.0 28 .................................... GGGGTCTGGACTTTCCTAGCGGCTTGTT 14621 36 100.0 28 .................................... ACACGCGATTAAACGCCCCGGCCACGCC 14557 36 100.0 28 .................................... CACACCATCTTTCACCGCAGCACGGCGC 14493 36 100.0 28 .................................... GCGTGTAGATCGTCGCGTAGCGGGTTTG 14429 36 100.0 28 .................................... AAGGCTCGGCGTACTCGTAATGCGCGGG 14365 36 100.0 28 .................................... GTCGTCCGGCTCCGGCTCCGACTGTCCC 14301 36 100.0 28 .................................... CGTCCCAGCGGCCATTGTCGATCATCCA 14237 36 100.0 28 .................................... CGTGTACGACGGGGAGCGTCTCATCAAC 14173 36 100.0 28 .................................... TGTCGGCGATGTAGGTGACGGTGGACAT 14109 36 100.0 28 .................................... AGGTACTGCTAACGGGTGGCCTCGTGAA 14045 36 100.0 28 .................................... CGGTGGCCAGCTCGTTCGGGTAGAGCAT 13981 36 100.0 28 .................................... AGTAATCAACGAATGAGAGTCGTTGTTA 13917 36 100.0 28 .................................... TGATCGAGGTCCCGGCTCATCACGCTGA 13853 36 100.0 28 .................................... TATGCACCATCCAAGTGAATCCGTCGGC 13789 36 100.0 28 .................................... TCACCAGCGAGAGAGGCTGTTCCTTACT 13725 36 100.0 28 .................................... TTGTGAACCAGGCGGGTGAGGCGGTTGC 13661 36 100.0 28 .................................... TGCTGTGTGGCGTGGTTGGGTGCTCCCG 13597 36 100.0 28 .................................... CGCCGATCTCCTTGAGGACGGTCAGCGT 13533 36 100.0 28 .................................... AAACTGTGAATATGCACAGTTTAGATAC 13469 36 100.0 28 .................................... GGTCCAGCTCATACAGCCTCGCGAGGAA 13405 36 100.0 28 .................................... ATGTGAGTATGACGGTCGGGTCGCTCGT 13341 36 100.0 28 .................................... CATGGTCTCGTAGGCATTTCGGCGTGCG 13277 36 100.0 28 .................................... CGATTTCGCGCAGGTACGCCATGAGGGT 13213 36 100.0 28 .................................... GATCCGACTTCGATAACGTTTCCGCCGG 13149 36 100.0 28 .................................... AGTGAACGATGAAGGGCGCGTCGTCCTG 13085 36 100.0 28 .................................... GCGCGGCCACGAGGGACACGCTGGAGGG 13021 36 100.0 28 .................................... ACAAACACGGCCGGTCAGCGTTTTTCCA 12957 36 100.0 28 .................................... GCACCGTGTCGATCTCGACCCGCGTGCC 12893 36 100.0 28 .................................... TGCCTTGGCGCATCGCTTTGTCGATGGC 12829 36 100.0 28 .................................... TCTGTTTCCACCGTTTGCGCGCGTCTTT 12765 36 100.0 28 .................................... CGGCAGAAGTGTCGAACAAGCCCCGAGG 12701 36 100.0 28 .................................... GGTGGATACCTGTCGCTCGAGGGCTGAG CGA [12687] 12634 36 100.0 28 .................................... ATAATTCGGTGACTCAGCGCACTATCGT 12570 36 100.0 28 .................................... GCCGTCCACACTGGGTGCGCAGCCCCGG 12506 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================= ================== 103 36 100.0 28 AAGTGTATCAAAGGGGATTGGTGATTGATTCCCAGC # Left flank : GACGGGCATGGCATCCCGACCGTTGCCGAGGCACTGGCTCAGTCTTTTGGACGCTACGTGGAGGGCGACATCGAGCGCCTCAATGTGTTGTCGTGGCAGGGGCCGTCGTCTGTGGGCGCGGGGGACTGACATGGCGGATGATGCGATGTGGTGCTTGGTGATGTTCGATCTTCCTGTGGAGACGAAAAAACAACGTCGAGAGGCAACCAGGTTTAGGAACGATCTGCTGGATTGGGGCTTCTGCATGGTGCAGTTCAGCGTGTACGTGAAGTACTGGCCGACCGGTGGACAGGATCATGCGACGTTGCGGGCGATCAAGTCTCACTTGCCGGAGGGCGGTCAGGTTCGGGTGCTGGCGTTGACGGATCGGCAGTGGGCGACGGGGCTCCGTTTTGAGAACGCGAAGCCTCGGAAGGAGCGTGGTTCGCCGGAGCAGCTCCTGATTTTCTAACGAAGATCCCCTGGTTTTCCGCTGTTTTTCAGGGAAAACTAGGGGATCT # Right flank : TTGAGTAGAGATGAGCCTTGATCAGGAATTGAGCATACCAAAAGCTCCTGAACATAGTTCAGGAGCAAAGGGAGCGGGAGGAGATCTTGGTACATGGGGTCTTTACAGCCTGAAGCTGAAGGCAGTCCCACACCCGAAGTCGCTGAAGCGGCTACCTTTGAACGTCTGTTACCAGACGTCCTACGCATCCTCTCGCCAGGTCGTTATTAGCCTAAAAGCAGAGTTTCGGTCAAGGAAGACATGAACAACGCTCTCTTGCTGACGCCGATTGATCAGAGTTTCCCCTCTGAGTGGAGATGACTCGTTCTCGAAATAGTGCTAGGACGCGGACGAGGGTGGTAGGCAGCCCACCTGGGAGTGATCCCCGGGCAGGTGAGCCACCCTCGTCGTCGACACGGACCGCCTGAACGACGAAGGTGGCCGCGCCCTCATCGCCCTTGGCATCCTCGAGGCCGTCGAAGCCTGCGGTTGCGCCTCCGAGATAGCCGACCGTCTCGACG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAGTGTATCAAAGGGGATTGGTGATTGATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //