Array 1 99010-92441 **** Predicted by CRISPRDetect 2.4 *** >NZ_PREQ01000009.1 Acinetobacter indicus strain IHIT33295 NODE_9_length_109233_cov_46.3911, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 99009 28 100.0 32 ............................ ATAAAAATATTATGTAGAGTATTATATATATC 98949 28 100.0 32 ............................ AAGTAATGAATGTATCACCATCTGCAATATAA 98889 28 100.0 32 ............................ TTGCCATTGGCTAGGTTGATTTTCCTTTGAGT 98829 28 100.0 32 ............................ GTACCAAACTAAATGCAGATATTTGTTCAAAA 98769 28 100.0 32 ............................ AAACTCAATAAATCTAAAGTGCCGAGTATCTC 98709 28 100.0 32 ............................ ATGAAAGAATAGATCCGCCAGTTTGCTGCACA 98649 28 100.0 32 ............................ CGACCAGATTACCATTTAAGAATCTTCTTAAA 98589 28 100.0 32 ............................ TAACCCACCTTTTATGTTCTGGCCTAATGAAT 98529 28 100.0 32 ............................ TTTTAGCGCACGAGTAGATCGGTCGTTAAGAT 98469 28 100.0 32 ............................ AACAACAGCAACGATCTTAAAGTTCTCCAGGT 98409 28 100.0 32 ............................ TGCGATGTCACAAAAAGACACGCCTTCGTCTG 98349 28 100.0 32 ............................ TTTTGTTAGTCTTAAGTGCTGAAAATCATTGG 98289 28 100.0 32 ............................ TTGATTCGCTAGTAAATAGACAGTAATGGTTT 98229 28 100.0 32 ............................ AATTAGAACAGGATATTGCAGCACTTCGTAAT 98169 28 100.0 32 ............................ AAGTGATTACACAGATATGGCTGTTAAGTTTT 98109 28 100.0 32 ............................ TTGCCATTGGCTAGGTTGATTTTCCTTTGAGT 98049 28 100.0 32 ............................ TCACATAAAGAGTCAAAAATTCTCGGTGAAAT 97989 28 100.0 32 ............................ AAACACATGCAGAAATAACAACACCCGCAAAA 97929 28 100.0 32 ............................ AAGCTGAACGCTAAGACTTCAAACATTACTGC 97869 28 100.0 32 ............................ TCCTTTCGGGCCTGTTGGTGGCGTATGCTCTG 97809 28 100.0 32 ............................ TGGTATTCACGGATATGGTAATCGCCGTTACG 97749 28 100.0 32 ............................ ATACATCGCATAAGGGTTATTCAGCAGATCTG 97689 28 100.0 32 ............................ ATCATTTACAAGGTTTTTAACTTGGGCTGAAT 97629 28 100.0 32 ............................ TTTTTTTGTCGTGTATCTAAAGTTGCAGATTG 97569 28 100.0 32 ............................ GCCGTATTTGCTTTTAATTTCGCGCTTATTCA 97509 28 100.0 32 ............................ AACAATTTACGCTCTTTGCTTGTGCAAGCATC 97449 28 100.0 32 ............................ AATTGACAGCCAATCTTTTCACGTATCTCTAA 97389 28 100.0 32 ............................ TCTTGAAGTAGGCACAGATTCAGCCATTAAAC 97329 28 100.0 32 ............................ TTGCGCTCACGCACTGGTCCAGACCGCTTGCG 97269 28 100.0 32 ............................ AACCACTCTAGATATAGGGAGCACCATTTCAC 97209 28 100.0 32 ............................ ATCTGCATGGATCTCCTGGATATTCCAGATTT 97149 28 100.0 32 ............................ ACACTTTGCACATTGTTGGCTTGTTTAAGCCT 97089 28 100.0 32 ............................ TTTTTTGTTGCCTGTTGTTTTGGTAGTGGTTC 97029 28 100.0 32 ............................ GGACGTTGAATGAATGGGACTCACAGTACCAG 96969 28 100.0 32 ............................ ATTCACGACAAGTGGATTGCCACGTTCATTGA 96909 28 100.0 32 ............................ ACACTTTGCACATTGTTGGCTTGTTTAAGCCT 96849 28 100.0 32 ............................ TTTTTTGTTGCCTGTTGTTTTGGTAGTGGTTC 96789 28 100.0 32 ............................ GGACGTTGAATGAATGGGACTCACAGTACCAG 96729 28 100.0 32 ............................ ATTCACGACAAGTGGATTGCCACGTTCATTGA 96669 28 100.0 32 ............................ TTGCAGGCGTACTTCAACCAACGACATTGCTT 96609 28 100.0 32 ............................ AAACAGTATTTCGCCTGCTTTTATCGAATGGC 96549 28 100.0 32 ............................ ATCTTGCCGGCGGCCAATCAATAGCGGATTTT 96489 28 100.0 32 ............................ GACCTATGCGGCGTGCTGGCCTCACTAGAGGA 96429 28 100.0 32 ............................ TATAAATCATATTTTAAAAATAACCTCAGTAA 96369 28 100.0 32 ............................ AACCGCTTTCAAGCTAAGATCGGGCATGGAGA 96309 28 100.0 32 ............................ TGCATGGAAATAAAAAAGCCTACTTTCTAAAG 96249 28 100.0 32 ............................ TTCAATTACTATAAGTTTACCCATCACAATTG 96189 28 100.0 32 ............................ GTCTATTGTGCCGCCGTATGTCGCGCTGTATT 96129 28 100.0 32 ............................ TTGTGATACTCCTTCAGGGTCGAAGCCAGTTT 96069 28 100.0 32 ............................ AACACATGAACAATGCTATACACGAAAACAAA 96009 28 100.0 32 ............................ ACCAAAGAAACCATAAATAGATTGGCTAAAAA 95949 28 100.0 32 ............................ TTAAACTTGTTGTAGGACGCAAAATCCTTAAA 95889 28 100.0 32 ............................ TGTTCGCACATCGCGATAAACTGCTATTTGCG 95829 28 100.0 32 ............................ TGCAGGTGGTTTCTTCAAGCCCGACAATATTG 95769 28 100.0 32 ............................ TTGCGAGAAAGCAGGGTATTGATATGTGTTGT 95709 28 100.0 32 ............................ TGATGGTTCTGCTTTGTGGCCTGAGAAACACA 95649 28 100.0 32 ............................ AACCACTGATCGAACATGGCTTCACTTTCTGC 95589 28 100.0 32 ............................ TTGATATCTAACATTGCAGCCTTCTATCTCAA 95529 28 100.0 32 ............................ ATGCGCGAAATTCAGGAATAGTTGGTGGCCAT 95469 28 100.0 32 ............................ ATAACGCTGGACCACACCGTGAAATTCTTCTA 95409 28 100.0 32 ............................ ATGCTTTCCAGCTAAAAATCAGAGCTGTAATT 95349 28 100.0 32 ............................ TGAATGCTTAATCTTTAATATTGAGTTGTTTT 95289 28 100.0 32 ............................ TATAAAAACGGCTTTTAAATATATTAGTTTGG 95229 28 100.0 32 ............................ ACAGAAATATGAGCTTGTAATTCAGTATCTTC 95169 28 100.0 32 ............................ ATACAGATTGAAGCTCAAGAAGATTTGTATTT 95109 28 100.0 32 ............................ GCCCAAATATCCTTTTTCGATTGCTTCTTTCA 95049 28 100.0 32 ............................ AAAACGATTCTTTGAAATACAAGACTATTGCT 94989 28 100.0 32 ............................ AACCACAACAACGCTACAGATAGCGGTTGGAT 94929 28 100.0 32 ............................ GTTAAGAACATCCTGTCTGCAATTGATGTTCG 94869 28 100.0 32 ............................ AGCATAAGTACATAGGAGCAACCAATGACTAA 94809 28 100.0 32 ............................ ACGCATGATGGGTACTCAAAAGACCTCATGAA 94749 28 100.0 32 ............................ ATTACCTGAAGGGGTAGAAGTTATTTCGATAG 94689 28 100.0 32 ............................ ACAATGATAAAGCTCAACAGTCCATCTATTAT 94629 28 100.0 32 ............................ TATACCTGATTAGCTGAAATTGGCTAATCAGG 94569 28 100.0 32 ............................ TGTCAAAATCATAACTGCCGTAAAGAATTTGA 94509 28 100.0 32 ............................ AATTCTTTGGAAATGCGGATTTGAGCGCGTAA 94449 28 100.0 32 ............................ AGAACAAAAGGCCGCTGTTGAACTGGAACAAA 94389 28 100.0 32 ............................ CATTGGAAAGTACATTCATACAACAAGTACGA 94329 28 100.0 32 ............................ ATGTGATTCCTAGTTGTTTGTTCTAATTGATC 94269 28 100.0 32 ............................ ATTACCGGTAAATGCTTTAATCCACCCGCCAA 94209 28 100.0 33 ............................ AACGTGTAGCATCAACGCTCATTGACTGCCTCC 94148 28 100.0 32 ............................ AGATGATAGCGGCTATCGCCATCTTTTTATTT 94088 28 100.0 32 ............................ TCTAACGGGAGGTCGTTCATCAAGCAGTACAT 94028 28 100.0 32 ............................ GACAATGGGAAAGGCTCATCTCCCTCTAACGG 93968 28 100.0 32 ............................ AAACGCTGTCAGAGCCATCTAAAAGAGATTCA 93908 28 100.0 32 ............................ TTTAAGCCGGTTTTCTTTTTAAGATGCAAATA 93848 28 100.0 32 ............................ AGTACGATGGCGGTCATTATGCGGTTTCCTCT 93788 28 100.0 32 ............................ TGGCCAATAACCCGACTTTCCTGGGCGACCTG 93728 28 100.0 32 ............................ TTGATCACATCTTCAGCGGTGGACATGCTTTC 93668 28 100.0 32 ............................ CAAAGCAGCCATAGCACCAACAAGCGTATTGA 93608 28 100.0 32 ............................ TCTTTGGTAGCAATCTGAATACGTGCTGAAAG 93548 28 100.0 32 ............................ GAAAAATCCAATTGCACGGAATGTATGGCTTT 93488 28 100.0 32 ............................ ACCAAATTTGATTTATTTTTGAATTAATCAAA 93428 28 100.0 32 ............................ AGGCTGGACCAACCTTCATGCTATTTGGAAAA 93368 28 100.0 32 ............................ TCCCATTTAGCAAGTTGGGCATTGTAATCATC 93308 28 100.0 32 ............................ ACTCGGCAACTTGCTCAAATAGCAGGTGAACA 93248 28 100.0 32 ............................ ATGGGGTGCAAACCTTGTTGGTGCGGGTATCG 93188 28 100.0 32 ............................ TCAACCGCCAAGCCGTAAGATGAAATCACACC 93128 28 100.0 32 ............................ AATATATACATATCTTCGCTTTTTGCCATGGT 93068 28 100.0 32 ............................ TCTAACGGGAGGTCGTTCATCAAGCAGTACAT 93008 28 100.0 32 ............................ AAACGGACAAAAGGTCAAGAAAGGCGATAAAA 92948 28 100.0 32 ............................ GCACGGCTGTATTGTTTTGGAGAGGTAATGAA 92888 28 100.0 32 ............................ ATACAGCTACACCCGTAAATGGGTTGGTACGA 92828 28 100.0 32 ............................ ATACAGCTACACCCGTAAATGGGTTGGTACGA 92768 28 96.4 32 ............G............... AGTAGCGTAATTATGGAACGAGTTAAAGCACA 92708 28 96.4 32 ............G............... AACCCCACCTTTATCACTGTAGAAGGCTAAGT 92648 28 96.4 32 ............G............... ATCTGTCAGTTCTTCAACTTCTTGCTGTTCTG 92588 28 96.4 32 ............G............... TTTGATCGTTTCAATAGAAACCACCTCAAATG 92528 28 96.4 32 ............G............... GGCATGGGGATGGGCAAGACTATTTCGACATT 92468 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================= ================== 110 28 99.8 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : AAAAATGGCTCAGCCAATATTTGGATTATGTGCATATTAGTTCTGTTAAAACTGTGCCATTAGATAAATTAACCGGTTATGCAGTTTATAAACGTAAGCAAGTGAAAAGTAGTGCGGAAAGACTCGCTCGGGCGGAAGCTCAAAAAGGCCGTTATGATTACGAAAATGCGTTGGCACATTATCGGAAGTTTATTAAAACAACGAACTTACCATTTATTAATATGCTGAGTGATAGTAGTCAGAATACAGAGTTTATTCAGAAGCATGCATTTAAGTTATTTATTGAAAAACTTCCCGCTGAAAAATCTGAAACTCAGGTTTTTAGCACCTATGGTTTAAGTTCGGAAAGTGCTGTACCTGAATTTTAACCCAATATTTTTTTGATTCTTTAACAGATTAATAAAATCAATGAGTTATGATAGTGAGTTAAAACTTGGGTCTTTTATGGGTTTTGGGCTTTAACTTACTGTTATAACTTTATTTTTTGTTTTAAAATTACT # Right flank : TATTTAAAATGATTCATTCAGAAAGGGGGCTAGAAGAATTTATGCTGAAAATTTATGGTGTGAAGCAAAATTAGTTTAAGAGAGTTCCTTTTTTAACAAATACTTAGTATCTTATCTCCACCATAAATGGGGGAAATATAATGAAAAAATTAATTTTAGCTTTAGCTATCGGGGTTATTTCTACTGCTGCAGTTGCTGAAAAACCATTAACTTTTAGTAAAGGATCGCCTGCTGTAATCGGTACCAGTCCAGATTATGTACATCATGAAAGCAGCTCTCAAATAAATAATACAAATCAATTTTCTATTGCGCTTGGCTATGCCGGATCAAAGTTAGGCTCTGATGAATTTCTCGGAACCGAATCTTTTGATGGCTTATTTGTGAATGCTGCTTATTAGGTACATCCTAAAGCCAGCCTTTGGGCAGAGTATATGTTCCAAAGTTCAGATATTGACTACAATCAATTTGCATTCGGTTATAAATACAAATTTCTGGAAAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //