Array 1 181997-181343 **** Predicted by CRISPRDetect 2.4 *** >NZ_WELQ01000004.1 Pediococcus acidilactici strain FAM18964 FAM18964_scf0004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================================================================================================== ================== 181996 35 100.0 31 ................................... TAATTTAGAGCTGTATTTGAATAAGCACCCT 181930 35 100.0 31 ................................... TAGCATGTCGGCACTCGTCCCGCCTACCCGT 181864 35 100.0 31 ................................... CGTCTGGGGTTAAGATTGCGACTGTGTCGCA 181798 35 100.0 31 ................................... CGTTCCCACATGAGTGATTACTGGAATGCGC 181732 35 100.0 31 ................................... CGTTCAGTGTTGAGATTGTAGGAAATTGTTA 181666 35 100.0 31 ................................... CGGTCGTTTATTGAAATTAGAAACGCGGTTA 181600 35 100.0 31 ................................... CACGATTTACCGTTTTAGGAATGATTTAGAT 181534 34 82.9 123 ........-.A...................GGC.A TGAAAAAAAGGGGAGTTTAATAATTAATGCTCATAGAGTTTAAATTTGGTATAATGCGAAATGGAATTTGAGAATGATTTGGTATTGGCGATTTACTCACAATAAAAATAAGTTGCTTTTATT 181377 35 94.3 0 .................................CG | ========== ====== ====== ====== =================================== =========================================================================================================================== ================== 9 35 97.5 43 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGAT # Left flank : CCAGGACTTAGTTATTCAAAAATATTTAACTAAGATTGAACGAGTTTTTGCCGAAGGGTTGGTGGATGAGCAACGTAACCAAATTCATGATCAGGTAAACCAACTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCATATGGTATAATTGAAGCGATTTTGAAGACTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCAAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGTAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : TAGAGCTAAAAATCTTAGCTCAACGAAAAACGAAAACTCCTATAAGTTAATGATTACTTTAACTTATAGGAGCTTTTTGTAGTTAGAGAAGGATGTTAAATAATTGAATAATGCGTCTTATTGCGAGAGACAATAAACATTATTTAAAATTGAATACGAGAGTAACGTTAATTTTTGAACAGCTCTCAAAAAAGAAGAGTAGAAAGATAAGTTTGTTTGTAAAATTAAAGTTAAGCTTTTTTCTCATAATTTATGACTTCCTTTGTATTTGTTTTATAAATTTATAATAAAAGCAAAATTTCATTTTATCAAAATCATCAACAATTTTCGAAATTATTATACCCCATAAACTTAGAAATCACAATAAAATAAGTACAGCGACCTTATATTTTATCCAGTAGAACACATTAAATAACTGATATAAAGAAAAAACTACAGACAACAAAAACAGCCCAACCGAATCCCAATCCAGTCAGACCGTCTTAAATTTCCTACATCAC # Questionable array : NO Score: 5.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-1.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //