Array 1 46256-47993 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAUVZ010000005.1 Klebsiella pneumoniae strain UMB7779 NODE_5_length_238977_cov_8.011681, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 46256 29 100.0 32 ............................. CGATCGTCAATCTCTGGCAAGCGCTGAAAATT 46317 29 100.0 32 ............................. CCAAATGGGAGCATTTATCTTTTCGCCGGTCA 46378 29 100.0 32 ............................. AGACTAATTATATACACACTTAATCCTGAGTC 46439 29 100.0 32 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAG 46500 29 100.0 32 ............................. GAAATTAATCGCCCGTCTTCGCAGTCCTGCAA 46561 29 100.0 32 ............................. GCCAGTAGTTTTATTTCGAAATGCATTTCATT 46622 29 100.0 32 ............................. TAACCCACCGCAATTACGCGAATTAAACCCCA 46683 29 100.0 32 ............................. TAACGTCGCGGTGCGTCATCTCATCGGCAGTG 46744 29 100.0 32 ............................. TTGAGTTCGGGTCACGCCGCCGGGGTTGAGAG 46805 29 100.0 32 ............................. GCCTTTTCCGTTTTGCCGAAGAGTGTTGCGAA 46866 29 100.0 32 ............................. GATTATGCAAAACGACTTAGAGCCATAAGAAA 46927 29 100.0 32 ............................. TTTTCGGAATTACTGCGAGCGAGAGAGTGTCG 46988 29 100.0 32 ............................. GCTGCGTTGCCGTATTTACTCGCAGCGGCGGC 47049 29 100.0 32 ............................. TAACAGACGTATCATTTATGTTTGCTTACTCT 47110 29 100.0 32 ............................. GAAGTTAGCGATTATTTTTTACTGGAGAAACA 47171 29 100.0 32 ............................. TGACAACCAGATCCGAAAATCCTGGAGCCGGG 47232 29 100.0 32 ............................. ATTACATCGTTTTCCGGGTTTCGTTTGAGCAA 47293 29 100.0 32 ............................. GAGGGGCCATGGAGCCGGTGTTGATTGCGTCC 47354 29 100.0 32 ............................. CGATTGTCGGTGGTTGTCTGCTGGTATCTGCT 47415 29 100.0 33 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAGC 47477 29 100.0 32 ............................. GCGTTGTCGTCTAACCCGTCTAACCTGCGCGG 47538 29 100.0 32 ............................. CAGGGTCGCCGTATCCTTCGCCAGATGGCGGA 47599 29 100.0 32 ............................. TTACAAATCGCCTCGGGTGGTGCTCTGAAATA 47660 29 100.0 32 ............................. GAAATTCTGATTTTTTTACCGTGGATTTCCAC 47721 29 100.0 32 ............................. GCTATGGGAGTTAATGACATGGAACAGAAATT 47782 29 100.0 32 ............................. GCTCTTCTTCCTCCGCGAGTTCTGCATACGTG 47843 29 100.0 32 ............................. GATTCTAATTGACGTTGTAATAATCGTGTGTG 47904 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 47965 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCGGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //