Array 1 30933-32551 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUGC01000015.1 Thermonema rossianum DSM 10300 K384DRAFT_scaffold00014.14_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 30933 30 100.0 36 .............................. GATGATTAGCCAGCGCTGCGTGGATGATGGCGGTGC 30999 30 100.0 37 .............................. ACTTCTTCGTAGCGCTTAAAAACGGGCGTTCATTCTT 31066 30 100.0 38 .............................. TTAAATTGGTGAGCAATAATTCTATTTCGGTGCCTGCC 31134 30 100.0 36 .............................. GTTCCAAGTTCGCCAGGGCTACGTGAGTCACAAGGA 31200 30 100.0 38 .............................. ATAATTAAAACCACTAAGGCGTCATTTCGGCGCCTTTC 31268 30 100.0 37 .............................. TTCGTCGATAACTACCAGTAAATTATTGAACATCACG 31335 30 100.0 34 .............................. TCCACTTCCAAAAGTATGTCGGTGCCGTGCAGGG 31399 30 100.0 35 .............................. TAGCCCCCGCCCTTTATTCCCTTGCTCGAACGGGT 31464 30 100.0 36 .............................. TTACCATACCATCTTCTGCCACGATAACCGTACCAT 31530 30 100.0 36 .............................. AAATAATCATATTGGGAGGCATGGCGTCCAACCCGT 31596 30 100.0 37 .............................. TGGCTTTAATTGATTATAATAGCGTAACCTCGGCTTT 31663 30 100.0 36 .............................. AGCTGCTTCTGTCGTGCGATAAAAGCCTCTTGTAAA 31729 30 100.0 36 .............................. CCGGTGATATTGCCTGCTTGCGCTTTGTCACCAAAA 31795 30 100.0 36 .............................. CGAACTGCCCCGCATCATTATTTTTTTTACCCCCTT 31861 30 100.0 35 .............................. GCCATATTTTACTGAAATACAGGAACTTAAAAACG 31926 30 100.0 35 .............................. GTGGTGTTGATACAGGGAACCCGGGCAAAGTCTTG 31991 30 100.0 37 .............................. TCTTCTTTCAGCCCTGCCCCCAGTATATCATTCATGG 32058 30 100.0 37 .............................. TAGGGCGTTGAAGTCTTTTTTGAGTTGTTTCAATTCG 32125 30 100.0 36 .............................. TTTTATATGATACCCAATATAAATTACTCTGAGTTG 32191 30 100.0 37 .............................. GCTATATCACCCATGGCAGGGAAGCGGCGGTATTGCT 32258 30 100.0 37 .............................. CGCAGGAAGGTTATTCTCAGATTGTAAACGATAGTAA 32325 30 100.0 36 .............................. TGTCTGTGGGGCTTAACCCCGGAAGCTCTACTATTT 32391 30 100.0 35 .............................. AGTAATGGCACCCCTTATGTTAATGGGAGGCTAAA 32456 30 100.0 36 .............................. TCCTTCCTTATGTAGATGAAGAAAAGGTGGACACTT 32522 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 25 30 100.0 37 CTTTTAATCGCACCAATGTGGAATTGAAAT # Left flank : ATATGATGTAGCCCAAGAGCGCACGGCCAAGATGCTCAAGCTGTGCCGCCGTTATTTGCATTGGATACAAAACTCGGTCTTCGAAGGCGAAATCACCGAAGCCAAACTGCAACAACTCATCTATGAGGCGCGTAGCCTCATGGACCCCGAAACCGACAGCTTCATTATATTCAGCAGCCGGCACGGGCACCGGCTCGATAAACAAATCATAGGAAAGGAAAAAAACACAACAGACAACTTTTTGTAAAACACTGAAAAACAAATGTTTAACAAAACGAATGTCGTCGATGTACACTCAACCGGCGTCCCTATCAGCAGACAGGAAGAAGCAAATCGAAGAAGCTATGGCACAATCAACTGACAATCAATGAATTACAAAAGTCGTCGTACCCCCGGCAAAATTGCACTACTCCCCATCGACGACTTTTTTCTCTCCTCCTTCACAAAAAAGTGCCCCCTACCCTTGCAAAAAAGCACTTTTTGCTTTATATTGCTTACGG # Right flank : TAGACATAGATTTATCAATCAGCTTTTATGAATCGGCTTTGTAGGTACCGGGCTTTATTGGCAAAAGGAATACTCCTTGTTGCAATGCATATTTACGGCATATCTTCCCTGCAGGCGCAGGGAGAACCCTATAGCATCGCTGAATATGGACATGTGCCTGCCGTGGAAGGTGATTTTAATGGCGATGGTGTCAAAGAGTATGCATGGCTGTATGCCGCTCCCAGTGTAGAGATGGGTTGTGTATATGAGCCTTGCGTGGGATATGTCATTTTTTCCAACCCCAACTTAAACCCCATAGAAGTACAGAGTGCGGTCAGTGGTTATTTGGTCAACGAAGGCGATTTAACCGGCGACGGTGCCGATGAAATAGGCGTATTGCCCATGTGGTTTACCAGTAACTACAAGTTTTATCACCTGTTTAGTTACAACCGCGCAACTGCCACATTCGAAGCACTTATTGAGCCCATTACCATCCGGCTCGATATGTACTTAGGCGATAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGCACCAATGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 162426-161674 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUGC01000008.1 Thermonema rossianum DSM 10300 K384DRAFT_scaffold00007.7_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 162425 30 100.0 34 .............................. TGTGATTGCAAGAAGAAAAAAACAGTAGTTGCTG 162361 30 100.0 36 .............................. ATTGGCGGGTATATCCACAATGCTTACTTCTATTAG 162295 30 100.0 36 .............................. TAGAGTTGCCCCCGGTCGATTTTTCAAAAATAGAGC 162229 30 100.0 36 .............................. CTTGCTTGTCATGCTTATGGTCGATTTGGTTTTATA 162163 30 100.0 36 .............................. GCTTGATACTAAAAGCAAGGCAAGAACAAGAAAAAG 162097 30 100.0 36 .............................. ATTGATGGAATATGGGGTGATCAAACAGACAAAGCA 162031 30 100.0 36 .............................. ATAAATTGTAAAATATTTAAAAATCTTTTTAAATGT 161965 30 100.0 35 .............................. TGCAGCGTAGGACTTAAACACATCTATTTCGTTGT 161900 30 100.0 36 .............................. CGCAAGTGGATAGATGGTAGAGACATTCATGAAGTT 161834 30 100.0 34 .............................. TGCTTAATTCGCATGTATGAATATAAGCAATCTT 161770 30 100.0 37 .............................. GACGCGTCGCAACCCTGCGAGCCAGCAGCGCCGGTTA 161703 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 100.0 36 CTTTTAATCGCACCAATGTGGAATTGAAAT # Left flank : | # Right flank : GGCTGTGTACTCTGTGCCCTCTGTGGTAAATCCTCTTAACCACCCCCAAAATTCTCTTAACCATCCCCATGCATGAATGCTCTCTGCGGTGAGTTCACTTGACCGTAGCAAGTTTCAGAAGGTGCCACGGATATTAAAGAAGAAGCCGGTTTCGCCCAGGTTGTTACGTGCTATTTCGGCTTGCAGCACCACATTGTAGAAGGTAACGAAGTCGAAGCCTGCCCCATAGGCATAAAGCCAGCGGTTGGCCAGGCGGTTGTCTATGTAGAACAAGAGTTTGTCCGACACATAACTCTGGTCAAAAAACAGGCGCCCGTAAAGTGCCAGCGGGAAAGTGCGAAACTCTTCGAGCGGCATGAAACGCAAATAGGTCTTCCAATCGAAGAAACGGTACTTCAGTGTGCTTTTCAGCAAAAAGAAATGTTGTCCGTCCATCACGTAGCGCTGGAAGCCCCGTGGCAGCTCTTCGCCATAGCCCAAGCCGCGCGCCAGAGAATAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGCACCAATGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA //