Array 1 48899-53889 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABVRK010000001.1 Aliarcobacter butzleri isolate Ab_DQ20dA1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 48899 30 100.0 37 .............................. GATGCTAGTTTCTATCTTGCAAATTATGGGACTACAG 48966 30 100.0 37 .............................. AAAAACAATAGATATAAAAGCGGAAGAGGAAAAATTT 49033 30 100.0 35 .............................. TTTAATAAACTATCATCAGGATTTGGTTTTCTTTT 49098 30 100.0 35 .............................. GTTAAAGAATATTTTGGGAGTAAAAATGAAGCATA 49163 30 100.0 36 .............................. ATAAATACATATCAAGTGATTTTAACAACAAATTTT 49229 30 100.0 37 .............................. TTGCATAAATCCTTTAAGTGCTGTTTGTTTTTTTTCT 49296 30 100.0 34 .............................. AAAATTGAACTATTTGTCAAAATTGCAAAATCAA 49360 30 100.0 35 .............................. AGTAAACGAATATGTTAATGGGCAAAAGACTGGAA 49425 30 100.0 34 .............................. ACACTTAATAAAAGAAGTGATGAATTACTGGCAA 49489 30 100.0 36 .............................. TGAAAAGTTAGGCTTTTCAGAAACTGAGATACTAGA 49555 30 100.0 34 .............................. TTAAAGAATTCTGGAGAATAAAGCATTCCTTGAT 49619 30 100.0 35 .............................. AGAAATACTAGAATACCTTTGTGAACTTCTAAACA 49684 30 100.0 35 .............................. CTAATTACAATATGAACATTTACATCGTGTTTTTG 49749 30 100.0 34 .............................. TTCAAAGAAAAAAAGAAAAACTGCCAGTTGGTGT 49813 30 100.0 36 .............................. TTATTTCAGCTTTTTCTTTATCTGACTGTTTAAAAT 49879 30 100.0 35 .............................. ATAAAAAGTCAAAAGATTTAGAGCGTGTAAGTTGG 49944 30 100.0 34 .............................. ATGGTTTAGTAAGATTTTATAAAGAAACAGTTAT 50008 30 100.0 35 .............................. TCTTTATTTTTAAACAAATCTTCAATATGCTTTTC 50073 30 100.0 37 .............................. TACTCTTGCAAATTTCTACCTTTGTCATATTTTAAAA 50140 30 100.0 35 .............................. TAAAGTAGATATTTTCTAATAGTGTCCACTCTTCA 50205 30 100.0 34 .............................. ACTGGAATGTTTGCCATATAAACTTGTGTTATAT 50269 30 100.0 36 .............................. TAATCATAATTAGGTACGTCTTTTAAAGATGACAAT 50335 30 100.0 36 .............................. GATAAAAATAATTACACAAATACAAGTGATAAAAGA 50401 30 100.0 36 .............................. AAGTACAAAGTTGGTGATATTCTTTATATTAGAGAA 50467 30 100.0 35 .............................. GTTGTTGTAAGTTCTGCACCAGCGACAATAATTTC 50532 30 100.0 36 .............................. TAAGTACCTAATGGGAATGCTCTTAATTCTTCAAGA 50598 30 100.0 34 .............................. AGAGTTAATTTCTCAACTGTTTTCATAGCTTTAT 50662 30 100.0 36 .............................. AAGCATCTGTTTCATCTTTTTTACCTTCCATAAATT 50728 30 100.0 37 .............................. TTTATCGGTTTTTCTTGAAAAGTTGATAATGTAATTA 50795 30 100.0 35 .............................. CGAAACCAAACATTTCATTTAAGTATTTAAGTGCT 50860 30 100.0 35 .............................. GGAACAGATGGAAATATATGATATTTTTGAAATGT 50925 30 100.0 34 .............................. TATATTAAACTAACCTTTTAGCAATAAAAAATGC 50989 30 96.7 36 .............................G ATAGGACAAGGAATGGCTCCAAATTGTTCACTTTGA 51055 30 100.0 35 .............................. TTATATTTTTCAAATATTTTGGCTTGTTCTCTAGT 51120 30 100.0 36 .............................. ACAATTCTTTTTGGAACAACTCCAAGTGGATTAAAT 51186 30 100.0 35 .............................. TTTGGTAGCATATTGCTAATAGTGGTCTTACTTCT 51251 30 100.0 36 .............................. ACTAAAGCCCCTTGACCTCTTTTTGACTCTTCTAGT 51317 30 100.0 35 .............................. CTTCTCCGCTTTCGATAACTTCAATTAATTTAGGA 51382 30 100.0 36 .............................. GGAGTTTTTTCTCCATCTGCTGTTTGAACTTCTGTT 51448 30 100.0 36 .............................. GTTAATAAATTAAAATTTAACAATAGAACAACACGA 51514 30 100.0 35 .............................. ACACTTCCAGCACCTTGTACATACCAAGTATTTGG 51579 30 100.0 35 .............................. AGATATAAAGGAATGAAATTTATTCCCGCAATAGA 51644 30 100.0 36 .............................. ATACTAGCAGGGTCATTTAGATATTGTAAATAAATA 51710 30 100.0 34 .............................. TATAATATGGACTTTGAAAGAAGAAGTATTGTAA 51774 30 100.0 35 .............................. GATGAAGTTTATGATGCAATTCTTGGCTTTGATTA 51839 30 100.0 36 .............................. TATTTTGCACTTTCAAAGAATCCAACTTTTGCAGTC 51905 30 100.0 35 .............................. ATTTATGCCAAATATTTTTTGTACTGTTGGGAAAA 51970 30 100.0 34 .............................. AGTATATCTTCAATCTTTGCATCTTTATTTAATT 52034 30 100.0 36 .............................. GGTCAAACAATAACAGAACAAACCGCCTTAACCTTA 52100 30 100.0 35 .............................. TTATTAAATACTGATTCAACTGCTATCGATAAGTT 52165 30 100.0 34 .............................. GATTAAAAAAACAAATAGAAGAAAATATAACTAT 52229 30 100.0 36 .............................. TAATCTTCTAGATAGCTTTTTGATACAAAGACTAGC 52295 30 100.0 34 .............................. TATTAAATCACTTTTAATTTCTTCAATGACTTCT 52359 30 100.0 35 .............................. ACGACTGGTGATAAGGCTCACAGTTCAACGACTGG 52424 30 100.0 35 .............................. GATAGTGTTATTTTCTCTCCAATCTTTCTTAATTT 52489 30 100.0 34 .............................. GAGAAATTTTGAAAGAACAGCACAAAGAGCAAGT 52553 30 100.0 34 .............................. ATTTATGAAAAATAAAGACTATAATTCGCTTATA 52617 30 100.0 36 .............................. CCTTGATTTACTTTTTTAAGTAATGTTGATTTTTGT 52683 30 100.0 35 .............................. ATTGTAGCACTTGCAACTAATCCAGTTTGACCTTT 52748 30 100.0 35 .............................. AGATTAGAAATATCTATCATTTTATAAATCCTTTT 52813 30 100.0 35 .............................. TTGGGGATATCTGTGTCTGATTCAATAGGAATGGA 52878 30 100.0 37 .............................. ATATTACTAGATATATCAAATCCCATTATTTTTGCTA 52945 30 96.7 35 ....................A......... TAATAAATTTCCTCTCCCGTTGTTCCTTGCACTCC 53010 30 96.7 36 .........................A.... AAGGTTGTATTCCGGTTGGAGTTTGAATAATCATGG 53076 30 100.0 35 .............................. GATATAAAAGTACCATTATCTAAAGGAATTTGAGG 53141 30 100.0 36 .............................. TCAATATTAGTTCTCTATCTGCACCAAAAATTAAAT 53207 30 100.0 34 .............................. GTAACTTTGTCTATATCTTCGCTTGGAACTATAA 53271 30 100.0 35 .............................. ATGACTTTGTAATGGAAGATGGTCTTGATTATTGC 53336 30 100.0 34 .............................. CCTTTGATAGTGGGTGATTGTTGATATAAAGATG 53400 30 100.0 37 .............................. TATATTTGGTGGCATGGACTACAAACTGCTTTAGATG 53467 30 100.0 34 .............................. TACAACTGGAAGTGAATTTATATTTTTTGGACTT 53531 30 100.0 35 .............................. GTTGCAACTCTTGTAAGAGTTTCAAAAGTACCTTC 53596 30 100.0 33 .............................. AATCCCAAAGTCAAAAGAAATAAGAGATTATTT 53659 30 96.7 37 .......C...................... GCTTCAAAGCTTCCATCGTTCTTAGGTTTAGTTGGTA 53726 30 100.0 37 .............................. AAGATGGAATTAGTTTTGTTTGTAAATATTGTATTGT 53793 30 93.3 36 ........T...........A......... GCAAGTCCACCTGTATTATCAATAGTTAAACCACTA A [53806] 53860 30 93.3 0 ........T...................G. | ========== ====== ====== ====== ============================== ===================================== ================== 77 30 99.7 35 CTTGAACTCAAACATATAATGTATTGAAAC # Left flank : CCTTTTAAACTAAAGGATAAGATGTGAAGAAAGATACCTTTAACTATAACTACGCTTTTTTATTTTATGATATAGCTGATGAGTTTAGTGAAGTAGGGAAATATAGAGTTGCAAAGGTTTTTAAAATTTGTAAAAAGTATCTAAAACATCATCAAAAATCAATTTTTAGAGGAAGTATTACCCCTGCAAATCAAATCAAACTAGAAAATGAACTTAAAAAAGTTATTGATAAAGAGCTTGATTTTATTTCAATTATAAAAGTTCCAAATAGTGGAAGTTTTGCTGAAACAATTTTGGGAAATGATAAAAAAGAAGCTGAATCGATTTTTATTTAATTTTTCCAACTGTATGTAGATGAGATTAATAAACAAACTGCTATAATATCGTCAATTTAAAGAGTTCCTTTACAACTTATTGTTAATTGAACTTTTGATTGGAAAAATTAGTTTTTAAGTTGATTTTTCGGCATAATTGATGTTTAATATGTTGATTTTGCCTTA # Right flank : CGATTTAACTAATGTCCTACCATTAATTAAACTTTTAATGTTCTGAGCCATAAAATCTAAAATAATAATAAGATTATATTATATTTATTATTATAAATAATCTTTATACAAACTATATTGTATGTATTGTATTAAAAAATAATAATTTTATTAAATATAAGATAATTTTTATATTAAATTACAAATAATGCTAAAAAATATAAGAAAATTTAAAGGTAAAGAGTATAGAATACAAAAACTAAAAAAATGAATGATTATTCATTAAATTGAAGGATAAGTTTTGAAAGATAAAAAACTTTATGATAGATTGGCCAATAGGCTATTAGATTTAGAAAAATTACCAAAGTTTAAAGAAGAAAAATCAATAACTTTACATTTAGAAGAAAAAGGTGTCTCAAGAAGAGATTTTATGAAATGGGCTACAGCTATGACTGCTATGTTAGCACTTCCTGCAACATTTACTCCTTTAGTTGCAAAAGCAGCAACTTTAAGCGATAGAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACTCAAACATATAATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //