Array 1 54127-55739 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKOA010000019.1 [Ruminococcus] lactaris isolate MGYG-HGUT-01310, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 54127 32 100.0 34 ................................ TCAGATCTGATACCATACATTCCATAATTACTGC 54193 32 100.0 33 ................................ TTGAGGCATGGGGGTGGCCGTATGAGTATATCA 54258 32 100.0 34 ................................ ATTTTTGATGAGATCAGAAAAACTGGCCCATTCA 54324 32 100.0 35 ................................ ACTTAATAAAAATGTAACAGCTCCAATTGCGGCAG 54391 32 100.0 34 ................................ ATTTTCCGCCTCCTATCCCGGTATCCATCTCACA 54457 32 100.0 36 ................................ ACGGAACATATAGTCCTCTCCTGCTGACTTCTCAAA 54525 32 100.0 35 ................................ CCGGTACAATCCGGGAACATATTGAATTTGATTGT 54592 32 100.0 33 ................................ CACCATATTTTTTATATAGGAATTGCCCATGTG 54657 32 100.0 33 ................................ CCTGTATCTGCTGACCAATCAGTGTTCCATCCT 54722 32 100.0 35 ................................ ATGGCTTTCTGTGCATCCAGTGATCTAACGAACAG 54789 32 100.0 34 ................................ CTGAAGCAGTGTTAAAAGTCGCAGGGTACAAGGA 54855 32 100.0 34 ................................ TTGTTGCTATGTCATTATATTATATGACTAAGTC 54921 32 100.0 34 ................................ CCCTGATCCTTTGCACATTTCGGGCGTGCTCCCG 54987 32 100.0 33 ................................ GCTGATCCGCAGCTTGATCCGTGTCGCTTCTGC 55052 32 100.0 33 ................................ ACGGTGCTGCCGTCAATGGCTACGATGCAGGAA 55117 32 100.0 35 ................................ TTGCAATGAAAACCCGTTAATTCTTGTAACAAGAG 55184 32 100.0 33 ................................ CATTTGTATCAACGTATGCCATTACAGCACATG 55249 32 100.0 34 ................................ GATTGTAAACGCTGCCTTTCCCTTCGGGCAGTTT 55315 32 100.0 34 ................................ CACGGAAGATTGCCGGAATCAACAGCAAGCAGGA 55381 32 100.0 33 ................................ GTCCTTTTGAGACTACTTTGTATGGGGTAACGA 55446 32 100.0 35 ................................ ATATTTAACAATCTGAGACAGAAAATCAAAAATCT 55513 32 100.0 33 ................................ CTGCAGATATCTTTTTCTCATCATTCCCCATCT 55578 32 100.0 33 ................................ GACTCTCTCTATCGGGAAACCGGTTGCTATTTT 55643 32 100.0 33 ................................ ATTTGTGAAGTCGGCGTGGGGGTGGGAGTATGA 55708 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 25 32 100.0 34 GTCACTTCCCTTGCGGAAGTGTGGATTGAAAT # Left flank : CCTGTATTTCTGTGGAAATGAGGTGGAAATATGCTGTTGTTGATTACATATGATGTAAATACAGAAAATGAAGCCGGAAAAAAGCGACTTAGAAAAGTAGCCAAACAATGTCAAAACTATGGGAGAAGAGTACAGAACTCCGTATTTGAGTGCATTGTGGATCAGGCACAAAGTGTGACGTTAAAATCTTTGTTAACAGAGATTATTGATGATAAAGTAGATAGCTTGCGATTCTACTATCTTGGAAATAATTATAAGACCAAGATAGAGCATATAGGTGTAGAACGAGGAATTGCAGTCGATCAGCCTTTATTCTTATAATTTGCAGGTGCGAGTGTCTAGCATACATAAAATTACCGGGAGACTCGCACCTGTAAAAATAAACAAATTTGAATGTGCTTTTTGTATAGACAGAGTATTTCAATAGTATACGAAAGTAAATTCAAATATATTTATAGATATTTCATAAAAATAGACAGATGTTTTTGTGGAATATTGCA # Right flank : TATTGAGCCGTTCTACATATGGGAATCCGAGGAGTAAGTGCTATCATCATAAATATTATAAAGACTTACTGAAATCCTTGGATTTGCCTGATATTCATTTTCACCAGTTGAGAAATACCTATGCAACCATTTTGCTGAAGAATAGTTTTAATTCAAAAGGTGTTTCGCATTTGTAGGACATGCCAAGGAAATTATATCCGTAGATGTCTATGGAGATACACAGGAAATTATAGAAGACTGTCTGGACGTACTGGAACCATTTATTGAAGAAGTTATTCCAAAAGAGAGGAAAGATCAGTATTATGATTATTCAGAAATGATTGAAATAGACTTAATTCTGGAGGAATATTTCAACGCAGCATGATGAAAAATAGAATAGTAGTGATAGAAAAAAGTACAAATAAGAATCGAACATTTGTACTTTTTTCTTGCGTTAATCTATATACTTTCAAAAATTTATTTGATATAATAGGGACTGTTACAAGAACAAACAGTAAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTTCCCTTGCGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA // Array 1 14061-15278 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKOA010000035.1 [Ruminococcus] lactaris isolate MGYG-HGUT-01310, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 14061 36 100.0 30 .................................... TTACACTGCTGCCCGATATCTGCCACCGCA 14127 36 100.0 30 .................................... CGGATCATACGATTCCATTGAAGAAGATGA 14193 36 100.0 29 .................................... AGAAAATATGTCAAGAGATGCAAAGATTG 14258 36 100.0 30 .................................... ATATTGCAGATGAGGAATGTAGCCACTATG 14324 36 100.0 30 .................................... GGCGAAAGAATGTCCAGGACCATGCATCCA 14390 36 100.0 29 .................................... CGCTGGTTTAAAATTCCCGAGAATTTTGT 14455 36 100.0 29 .................................... ATTCTGTATCATTTCTGATTCATTGATTG 14520 36 100.0 30 .................................... AACCCGTCCCTGCTCTTCTTCTTTGACCAC 14586 36 100.0 29 .................................... CCTGTCTCTGCATCCACAGCTTTCCCGTC 14651 36 100.0 30 .................................... AGCTTGTATCAGATGCGAATGGATCGGTTG 14717 36 100.0 30 .................................... GATGGGAGATTCTTTGTTCCTGTCAAAACT 14783 36 100.0 30 .................................... TACCGTGTGGAGTGATTGTATGGCTTTATT 14849 36 100.0 29 .................................... GAAGATACGGTTGAGAACATGGCAAAAGA 14914 36 100.0 30 .................................... ACCGCATACAGTTCATGTGCGTTCTGCTTC 14980 36 100.0 30 .................................... ACTACTATACTTCTGTAACATCCACTGCAT 15046 36 100.0 29 .................................... AGAATCGGAGTTACAGGCATTATTGGATA 15111 36 100.0 30 .................................... GTGGAAAGTAAAACCTGTTGCAAGGATTCT 15177 36 100.0 30 .................................... AAAGATTGACAAGGGGCAATCATCACAAGT 15243 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 100.0 30 GTTTGAGTACCATACATTTTTACATCATTCTCAAAC # Left flank : TCCGGGAAATTGTCTTCATTCACCGTAATCCCATCACTTGTATCAGTTACTGGCACTGAATTTATTTCTTTATGGTATTTGTCAAAATCAACTATTAATTTTCCACACTTTTTCTCCCACATAATTCCAATATGGTTCTTGTATTTTTCAACATAAGCACGTCCATATTTTTCAATCAGCCTTTGGCCAGCTATATTCGTTGCCTTTTTCTCGCTTATCATAACCTGTCACTCCTAATATCTCATTGATCCAATCCTGGGTGCTTGCAGTAAACTCTTTTGTATTACCTTTCAAATCTATTATAATACTTTTTTCTTGCCAGGTAAATAGCTTTAACGTCTCTCGATCTTCCGGTGACGCAATTATTTTCGTCATTGTCGGATGGGAATGAGCTGTCCACTCGTAATGATTTTCTTTTATAATTTTCCATGCATCATGCGGAATATGCCACGTTTTTGAAGTTCCATGTATAAGAATCTTTGATGATTTCCCTGTGCTTA # Right flank : CCTCAAATTCAAAAATGAAATGCCATCATTCGCATAAAATACAGGTACTCAAACTGTTAGGATGTTATATTTCACATCCATCTTTATCTATAATATACCTTGTTACACCCTCAATGCAATCTCTCGCACAGGTTTCAATCAATAAAAGCTGAATTTCCTGATACGTCGCTTCTTTTATTAATTCATCAATCTGCTGATTTGATAAATAACTTCGCAAATTAACAAATACAAAAAGCTTTTTCTTTAATAATCGTTCCACTATTCGCATATATCTCACAAGACGTTCTAAGAAGTTTTCTTCCAGTACCTCATATTTAATACCAAAAGCTTTAAATAATGAGGCAAAATCTATTTCATCCGCAAGATCAAGGATATAGTCTGTCTCCTGTTCAAGCTGTAATAAATACTCTTGCAGATATTGCTTCATTTCCTGGGTTTTCACATAGAATCGTTCGTCCGCAGTAAGCTTTTCCAATTCCATATAAAGTTTGCTGATCAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGTACCATACATTTTTACATCATTCTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //