Array 1 170741-170345 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIF01000008.1 Streptomyces sp. SID5594 SID5594.c8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 170740 30 100.0 31 .............................. GGCGGGCGAGGTCCAGCAGGGTGCCGCGGTG 170679 30 96.7 31 .............................T CGGTGAGCCGCTCGTTCCAGGTTCATCTTCT 170618 30 96.7 31 .............................A GGGCGTCCGCGCTGATCTTCCCGAGGGTCGT 170557 30 100.0 31 .............................. TGGTCAAGGGCGGTAAAGGCGAGCTGGCGGC 170496 30 96.7 31 ............................T. AGATCAGCTCCGAGCAGGCCGACCCGTTCTG 170435 30 86.7 31 ..............G.........T...GA GCCTCGGCGACCTGTTCGTCGAGTCCGAAGC 170374 30 70.0 0 .............GG........TCCGTGG | ========== ====== ====== ====== ============================== =============================== ================== 7 30 92.4 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : CCCCCGACGCCCCCACCCCCGCTCGCCGCGTCCTCGTGGAGTGCACCGACTGCGGCCGCCCCGGCCAACCAGAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCACCACCCACCAACCCAACACCGACAACACCGACCAAGCCCCCACCGAACCCACCGAGGCCGCCGACATCGAGGCCCGCATGGCCAACCTCCGCGACCTGCTCAAATCCGTCTGAGGCCGGTGGGCCACAGATTCCCTGGTCGATGGGGCATGCACCGAGGGCTGGGGCGCTTGCATGGCAACCATTCGCCTCCGAAAGGCGTCCCGGACCAGCCGTCTCCGTCCTCGCCAACTCGGAGAAGTGGGAGCCCCTTTGCAGTCATCGAGGGCAGAATCACTTGCGACATACACAGCATCGAGCACAGCCCGCTCGCACCTCGGGGGAGATATGTCCGTTTCTCAAGAAGTAGGTAAAAACGAGCCTCCGCCCGCATAAACCCGCAGGTCGCGAACT # Right flank : TGGAGGTCGCCGGCGGGGTGCGGGGGCCGGCGCCTCGTGCTGCACGATCTGCGCGCGCATCCGCAGCCGGTGCTCGGTCTGGTGATCGCAGGCCGCCTTTTCGAGTCGGTGCAACTCAGCGGCGGTCAGGGGATAAGGGCAGGGGATAAGGGCAGGGCCATCCAGCAGGCCGGAGCGACGGGCATCATGCCAGGGCCGGATCGGGAGAAGTGCATCGCGACGGGCCGCTCACCGAAGCATCCTGCCGTGCTGAGTGGTCAGCGGCGTACCTGGCTCCCCTCTCGGAAGATGATCGCGGCGCCGAGCGCGGACGCGGCGGGTACGAAGATGTCGCCCGCGTCGGTTCGGCCGACGGGGAATCCGTTGTCGCGCAGCAGCTTCCGGGTGGCGGCGAGATCACGCATGGCGACCGCGTAGGCGACGAACGCGGGTACGGCAGGGGCGTGTTCGCCCGGCAGGGTCGTCGCGAGGTGGGAATCGGGGACCAGCGTCAGCCGGCT # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.62, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 175848-175515 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIF01000008.1 Streptomyces sp. SID5594 SID5594.c8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 175847 29 100.0 32 ............................. GTGACGGCCATGGCGGTGCCGGGGTGCGGGCC 175786 29 100.0 32 ............................. CCAGGCCGCGAGGTCTCCCTCGCTGTAAAGGG 175725 29 100.0 32 ............................. ACAAACGGGTTCCTGGCGGATCTCTGGATCGA 175664 29 100.0 32 ............................. GTCACCGATCTGATGGAGCGGGTCGCCATCAT 175603 28 89.7 32 .............G........-....T. CTCACGGCCGACCTGGTGTACGTGAAGCCCTA 175543 29 93.1 0 ....................A.......T | ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.1 32 GTGGTCCCCGCGCAGGCGGGGGTGTTCCG # Left flank : CTTCGGTTCCGAACCAGCGTCCGGGCGCGCGGGGTAGCGGTGAGGCTGGTCTCCGGACGCGGCGGGGAGACCGGGCGCTTCGGCGGGGGCGGGGTCTTCGGCGGATGGTCCGGGGCATGATCCGACACGATGGCTCCCTGTCCCTGGGTCGGCGGCGCGGATGGCCATCGTGGTGGGTTTGTTGGGGCTCTTGGCGGCGATTGACTGTGGCTTCACCCGTACAGATTGGGCGGCCGTACGGCTTGACGCTGGCTTGGGGCGGGCGGCGGGTTCTGGGGTGGATGGGCGGAAGTGCGGGGGCATCGGGTGGTCAGCGGTGGGCTCCTGGAGGGGGCGTGCTGCCTGTGCTGCTCCTTGCGGTGGCCGATGCGGGCGACTCACTCGGCATCGGGAGGCTCGTGTCTGTGCTGACAGTTCCGTTCTGTCAGCATGTAGGGGTGAGGACCGCACGAGTGAGTCAAGGATTGGCAAAGCCCCCATAGACTTGCAGGTCAGGAAGA # Right flank : CGTACGACGAGGCAGCAAGTTTGCGCGCAACCAAACGACTCCGGCCGTGATCAGTAATCTGCTGCAACCCTCCTGCTGCGCCGCGCTACTCGTCGCATCCTGGTCCTTCACCCAGCGCGTAGACGGAGGGCACCATGACGCTTAGGTTCATCGGCACGACCAGCGACGAAGGCGACTGCCCCACCCTGTACGAGATCGAGGGCACCACCGACATTCTCGTCCAGGGCGAGCGCGTCACCGACCCCGAACTCCTCGCCCGCCTCCGCAACGTCAAGGAGTCTGAGACGTTCGTCGTCGTCCCACGCGACCTGCTTGTCCGCTTCGCCCCGCGCACCACCGCCCCGACGATGGTCCCCTTCTCCGAGATCGCCCCTCTGTTCCGCGGCTTCAAGCACACAGCGTTCCGGCTGGAAACCCGCCGCGGCTACGCCTCCGACCGCAACAGCCCGAAGTGGTCCCGATGGCAGGAAGGCGCGGACCTCACGGCGGAGCCGGAAACT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCAGGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCAGGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 378202-377768 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIF01000017.1 Streptomyces sp. SID5594 SID5594.c17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================================================== ================== 378201 30 86.7 31 ...........CG............T...T CAACGATGGCCAGGGCTGCGAGAAGAGGTGT 378140 30 93.3 31 .........................T..G. TGTGGTGCTCGCCCGTCACGTCGGTGCACGG 378079 30 90.0 31 ........T................T...C GATGGGCTTCTACGACTCCCAGACCCTCATC 378018 30 93.3 69 .............C...........T.... CGACCGGCTCCAGCTTCAGCTTGGAGCGGGGGTTGTCCCGACACCCCGTACGCGGTTGGGCAGCACGAA 377919 30 86.7 31 .A......T................T...A AGGCGGAAGATCTGCTCGACACGTTCAACGA 377858 30 100.0 31 .............................. GCCCGTCCTCTTCGAGGATGGCGACGATGGT 377797 30 86.7 0 .......................ACC...T | ========== ====== ====== ====== ============================== ===================================================================== ================== 7 30 91.0 38 GTGGTCCCCGCGCACGCGGGGGTGGGCCCG # Left flank : TCCCCGCACAGGTCGACAGCCCCCTCGGCTTCATCCGCAAACGCCTCACCGACAAGATCCCGCCCCGGATCCCCACCACAGACAGCACCTCACCCGGCGCCCCCGGCTCCGCACCAGCCCGCCGAATCCTCATCGAATGCACCGACTGCGGCCGCCCCGGCCAACCAGAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCACCACCCGCCAACCCCACACCGACCAAGCCCCCGTCGACCCCACCGAGGCCGCCGACATCGAGGCCCGCATGGCCAACCTCCGCGACCTGCTCAGAACCGTCTGAGGCCGACGGGGGCGGATTCCCCCCTTGCCAACTCGGAGAATGGGGAGCCCTTTGTAGTCGACGAGGGCAGAATTGCTTCCGACATACACAGCACCGAACACAGCCTGCTCGCACCTCGGGGGAGATATGTCCGTTTCTCAAGAAGTGAGTAAAAGCGAGCCTCCGCCCGCGTAAACCCGCAGGTCACGAACT # Right flank : GAACCCGACGGAGCCCGTGACGGTCGGGGGATCATGGCTGCGTACCAGCCGCCGGAGGCACAGTGATGGGGGAATCATGGTCGCGTTCCACGCGCCCGCACTCGACGGACTCGCCCGCAACCCGGCGCTCCCGACACCGCTGCTGCTGCGCCTGCTCGCGTTCGACGGAGGCGGTGATGGCCCGCCCCGACACGCCATGCTTCGACCCGGACTCCCCGAGTCGGCCATCGCGGTGATCCTGGCTCACCCGAATCCCTGGGTCCGGATCGACTACGCGAAGAGCAAGTTGGCCGAGCCCGGGCAGCGGGCCCGGCTCGTGGACGACCCTTCCCCCAGGGTGCGGGCGGCACTCGCGTACGGACCCCAGTTGGGTGGCCCCCGTGCGTCGGTGACGCCGCTGCCGGACGACGTGTGGGCCCGCCTGCTCGACGACCCTGACCCTTCCGTACGGGCGGCTCTGCTGGAATCACCCCATCTCGCGCCGTCGTTCGTGGCCTCCT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:-1.5, 6:0.25, 7:-0.41, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGGCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.10,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 912574-915223 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIF01000001.1 Streptomyces sp. SID5594 SID5594.c1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 912574 29 96.6 32 ..........T.................. CGCCTCCAGGTCGACACCGCCGCCGCGAATAA 912635 29 100.0 32 ............................. CCGCACACCCACCGCCACCGAACGCAAAGGAC 912696 29 100.0 32 ............................. GGCGGTACAGACGAGCCCCGAATCCCGAAGCG 912757 29 100.0 32 ............................. TACGGCTACGGCGCCCAGGGCGCCCACATCAC 912818 29 100.0 32 ............................. GCGTGGCGGGTCGACCTGCTGAACGAGGTGGG 912879 29 100.0 32 ............................. ATGAGGCCGCCGCCCACCGCCAGGACCCAGAT 912940 29 100.0 32 ............................. CGCTCAGGGCCAACCAGAGACACCGCACAGCC 913001 29 100.0 32 ............................. CGGGAGAACCGTTCGACGATGGTCAGGCCGCT 913062 29 100.0 32 ............................. CTTCGCATCACGCTCAACCCGGCGTCGCAGGT 913123 29 100.0 32 ............................. GTCACGTCCGGTCAGAACGGCGGGCAGGGAGG 913184 29 100.0 32 ............................. CTCACCTGGGAGGGGGCCAGCGCCTTGGTCTT 913245 29 100.0 32 ............................. TCTTCAACCAGATGAACGACTTCTACGACGCG 913306 29 100.0 32 ............................. TGCTTGTGCACCGTCTCGCCCTCGCGCGTGCC 913367 29 100.0 32 ............................. TTGTCGACGGCCGCGAGCGCCTGCGGCAGCTC 913428 29 100.0 32 ............................. CCGGCGACGCCGAGCATGAACAGGCGGGCTCC 913489 29 100.0 32 ............................. CTGTCGACTTCATCGCGCGGACGACACATCCG 913550 29 100.0 32 ............................. CCGTGACCCGGGTGGGTTAGGGGGGTCGGCGG 913611 29 96.6 32 ....................A........ ATGTCCTTAGAATCCAAGGGTCAAGGGGGTGG 913672 29 100.0 32 ............................. ACCTCGCGCAGCTGATCGCCCGCCTCAAAGAC 913733 29 100.0 32 ............................. AACGCCGGCGGCGCCGACGGCACGGCCAAGAA 913794 29 100.0 32 ............................. GCGATCGAGGAGCGAGCCCAGCGGTCGCACAA 913855 29 100.0 32 ............................. CTGGACGCCGTCCGCGAGTACCTGGAGCAGCG 913916 29 100.0 32 ............................. GTGGACCCGGCCTTCAAGCCGAGCGACAAGCA 913977 29 100.0 32 ............................. GAGCGGGCGTCCCACCACCACATCGACGTCGC 914038 29 100.0 32 ............................. GCCTGTCCGCGAAGGCTTACCTGATGTACGCC 914099 29 100.0 32 ............................. GCAGCCGCGAAATTCGGCACCTTCTCCGGGGC 914160 28 96.6 31 ....-........................ GAGCCACCGGCGACAGTGTGGGGGAGGGGTA 914219 29 100.0 32 ............................. TCCACGCCCGGTCCGTCCGGCCCGAAGGTTCC 914280 29 100.0 32 ............................. TCCACCGGCATCTGGCCCGACTGGACCGGGCC 914341 29 100.0 32 ............................. CCGGATGCGCCCCTCACGGTCGCCGCGGCCTT 914402 29 100.0 32 ............................. ACGCACAAGGGCGACACCATCCTCAACCTCGC 914463 29 100.0 32 ............................. CCGGATGCGCCCCTCACGGTCGCCGCGGCCTT 914524 29 100.0 32 ............................. ACGCACAAGGGCGACACCATCCTCAACCTCGC 914585 29 100.0 32 ............................. CCGCCGAGACATGGATCGCGGGGCGTATCGAC 914646 29 100.0 32 ............................. ACGATCACGGCGGCCGTCGCCGCGATGCGGTT 914707 29 93.1 32 .......................C....T CCGCGACTGACGGAGGCAACGGCTTGCTCGCG 914768 29 100.0 32 ............................. GCTCTTGCTGCTGCGCTGGAACTCACCCTTGG 914829 29 100.0 32 ............................. ATCCGTTGGCATCCCGGAGCTTGGAGAGCAGC 914890 29 96.6 32 ................T............ GTCGTCGCGATCTCGGTAGCCGGGGTTCTCGT 914951 29 100.0 32 ............................. CCGGCAGAGCCATCTTCGCCGTCGGCTGGTTC 915012 29 100.0 32 ............................. ACGTACACCACCGACCCCGATGCCGAGCCGCA 915073 29 100.0 32 ............................. CCGGCGGTCGCGGCTCCGATGCGGAGGTTGCG 915134 29 100.0 30 ............................. TCGGGCCCTCCGCTGGAACCGCTTGGCAGT CG [915142] 915195 29 79.3 0 TC.T....T..........TC........ | ========== ====== ====== ====== ============================= ================================ ================== 44 29 99.1 32 GTGGTCCCCGCGCAGGCGGGGGTGTTCCG # Left flank : GACACCCCGACCAGGGGGACCCCGATGACGGGGGTCCTGGTAGCGGGGGTGGACTCGGGGGGCGTGCCGTTCGTGGTGCGGCTGAACGCGGTGAGGGAGGCGGTGGACGGGGAGGACTTGGACGCGTTCGTGGGGTCCATCACGGTGAAGTAGGGGGTGGGTGGCGTTCAGGCGGGGCGGGGGGCATTGGCACATTGGCACACCACTGCCGCCCGCGGGCCTGTTCGCTGGGCGGCACCCGGACGAACGCACCATCACCGTCGCCTGTGCCTGCCTCGTAGACCCCACCCGTTCCATCCGGACTACCCGCTGCACCCGCCCCAGCCGCCACGCCGGATGCCGGCCCCTGCGGCCGCCTCCACACGAACGCCGCAATGCCCGACCGGGCCATCTGATCACTTCGCCCGTCAGGCATCCACCCCTGCGAGGATGGGCGGGTGGCAAGAGTGGCGAAAGGTCAACAACTTGCAAAGTCCCTCTAACGCCGCAGGTCAGGAAGA # Right flank : GTTGAGCCCCTGGATGAGCCGGATGGTAAACCGGGTAGTACCGGGCGAACCTGGGGCCGTGCGGCCTGGGGTGACCGGCGCCCGAAAGGGCCGTACCGGATAAAGCCGCATCAGGCCGGACCGTACGGCCTGTAAATGTGGCGCGAACCGGTCCAGCGCCGAGCACTGAACACGTATAGCGACAAAATGCACACTCGCGGGATACACCCGTCGGTAATTTAACTCCTCTTTCATAGATCTCCACCGCGGACGCGCAGCATTCACATTCCGTCCCGCTTTCCGTTTCCGTTCCGCTCGAGGTCGGGGCGCCAGGGAGGCGAGGGCGGTTCCCTCGGTGCCGGTCGCCGCGCGGATTGGTCTCTCACCTGGTGGATCGTGTGAAGAGACGTCACCTTCCCTATGACTGCCTCTTCACCTCAGGCCAATTCGCTATCGCCGTAAGCCCTCTTCCGCTTCGGTGCGATTGGCCGCATGGATGGAGTGCGTGCTTTGATCCATCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCAGGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCAGGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1480125-1480643 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIF01000001.1 Streptomyces sp. SID5594 SID5594.c1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1480125 29 100.0 32 ............................. CAGAAGTCCGAGTCTCTGGTGATCCTCGGTGG 1480186 29 93.1 32 C.......................C.... GACGAGGCCGCCATGCAGGGCATCCACATGGC 1480247 29 100.0 32 ............................. GCGGGAATGGTCACGGCGACACGGCCGCCAGG 1480308 28 89.7 32 ...........T..-.........G.... CAGACCGGCTGGGCGTTCAAGGACCGGGTCGT T [1480319] 1480369 29 93.1 32 ............T...............G GGCGAGGTCATTTGGCGCGATATGGAGTCGCG 1480430 29 89.7 32 .C...T...............A....... GACGAGCTGACCGTGGTGGTCGAGTGCTCGGG 1480491 29 96.6 32 .............T............... GTCTGCAAGATCGCGGACCTTCCTGACCTGTA 1480552 29 96.6 32 ........................G.... TGGGACTATCCGGACGAGTACGGAAACTACGA 1480613 29 82.8 0 A...........T.C......T..C.... | CT [1480640] ========== ====== ====== ====== ============================= ================================ ================== 9 29 93.5 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : CTGCGCCCGCGACGCGGACAAGCTGGAGTGCCTGCTCCAGGGCATCGAGTACAAGGCACAGGGCTACCAGAACGCCCAGCGATGGATCGACAACAGCCGCAGCCGCCTCACCACCGCGACGGCAAAGCGACTGGCCGACGAGCTCCTGGCCCAAGGGTCTCTCGACTGGCTGCGCACAGCTCTCGGAGAGGGCAAGAAGTAGATCCCTGGGGCGCGGCGGATGTGAAGTCCGGCCGCGTCTGAGGGTTGTGCCTTCTCAGGGTGGGCGAGGGCCTGCGCGTTGTTGCCTTGGGCGGTTTTGGAAGCCCACCCAGGTTGACTGCGCTGCGGGGGGGGTATCGAGATCTCCCGAGCACTGATGGCGAGCAGATGGCGTAGCTGTGCATCGAGGTAATGAGGGCTGCACGACTTCTGAACGGGGGCCACTGGGAGATATGTCCGTCTCTCAAGAAGTAAGTAAAAACCAACCTCCGGCCACCTAAACCTGCAGGTCACGAACT # Right flank : CGCATGCGGCACCCCAGCCGCAGTCAAGTACAACTAGGGCACGGTCTTCGCCACGAAACAGGTCACGGTGGCGATCGAAGGTACGTGCGTCAGGGACCGTGACTCGGGTGGGTCCTTCTACGCACTCGGGGGAAGGGCAGGGCGTATGCGGAACGCGGCGTCGAAGGCGGTAGGGAAAGCGGAGGAGGGCGCAGGAACGGTCGGCTCCTTGGGGCCTCGTGCTGCCTTGGGATCAGCGACATCGGGCTTGGCCGGTCCGGGCTCGCGGGCTCCCTGGCGGCGGGCCGGCGTGGGCAGGGTGGTTCTCTCCCTGCTCGTCGTCGCCTCGTTGGGCGGATGCTCGGGTCAGCAGGGCCATATGTGCACCCTCATCGGCATGGACTCGGGCGTCTCCGTCGTCTGGCGGCCGGCCGACTTCAAGGGGTCCGGCGGAGCGATCATCCGGGTCTGCGTGGACGGATCCTGCGACGAGCGCGCGTCCGGCGACCCCAGCGATCCGA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1688242-1688392 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIF01000001.1 Streptomyces sp. SID5594 SID5594.c1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1688242 29 100.0 32 ............................. CAGGTGCGGAGGGTTCGGAGGCGGGGCAGGTC 1688303 29 100.0 32 ............................. AGACGGATCGTGCGCCGCAGCAGCCCCTTCCA 1688364 29 86.2 0 ..A..................A.C.C... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 95.4 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GTTCCTGGCCCGCTTCCCGGACGAATCGAGTTACGCCGGGGAGCGCGACCGGGCGGAGGAAGGCCTGGCCCTGCTGGTACGGCGGGCCAAGGAGGCGGGAGCCCTACGCCCGGACTTCGACGTGTCCGATGTGGTTCTGGCCCTGCTGGCGAACAGCGGGGTGGTGAACGGGGTCCAGCCCGAAGCGGGGGCGACATCACGGCGGTTGGTGGGCTACTTGCTTGAGTCGTTCCGGACGGAAGGAGCCGTACGACCCCTGCCCCCGCCTGTACGGCTGGAGTTGGACCAGCTTTACGGGGCGGGGTGAGGGGGCCAACTTCGATCGGGGTCGCCGGGAGGACCGTAGTGTGCCCACCGGGGTGGACAGCGCGTCCACGATCGGAACAATGGGACTGCGCGGCCTGCGCCGCGGCCACCCATGAAGCGAGGCCGATACGTCCGTTTCCCGGGAAGTGATGAAAAACAACCTCCTGGCCACGCAAAGCCGCAGGTCAGGAACT # Right flank : CATCGCGTCGACCTCGCTGAGTCGCCGACTGGCTCACTGGCTGAGGAACCGGGTCGACTGGGCCCCCCGAATGATGAGGCGGACCGGCAGTCTGAAGCGGCAGGTGGCCGCGGCGAGGCCCGTCACCCCGCCCACCGCCCCGTAAGAAACGCCAGGGCCACCAGCGCACTCACCGGCACCGTCACGCACAGGTACACCGTCCGGAACCACGGGCGGCGCAGGCTCAGGGCCGCGAGGCCGATCCACAGGGGCCACCACAGCAGCGTGGCGCGGGGGATGGAGACGTACCAGTACGACGTTCCCAGCGCCCAGAGGCTCAGCGCGACGTACACCGCCTCCGGCCAGCGGCGGTGCCGTACCAGCAGCGCGACCAGGGCCAGGCCCACCAGCATCGCCGCCAACTCCGCCTGGAACATGGCCGCGTAGCCGGTCGTGTGTGCGCCTTCGAACGCCGCGTTCCACGTGTTGCTCCACGCCTCCCACGGGGTGTGGAAGTCCCG # Questionable array : NO Score: 5.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //