Array 1 11734-8766 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADZGS010000046.1 Shewanella algae strain HUD-G3 HUD-G3_46, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 11733 28 100.0 32 ............................ ATTGGTATTATTAGCCTGCGCCTTGATATAAA 11673 28 100.0 32 ............................ GTGAGGCGTAGGAGTTTTATACATGAGTGCTT 11613 28 100.0 32 ............................ TTGATATAGCGGTCTGTTGCTATCGGGGAGTG 11553 28 100.0 32 ............................ ATCTGCGCCGCAAGACTTAACACCAATGGTTG 11493 28 100.0 32 ............................ ATCAAGACAAGAGGAAGTGCAAAGAAAGCGGC 11433 28 100.0 32 ............................ TCGCGCGGGTTTCTTTATTTCCACCTGTAACA 11373 28 100.0 32 ............................ GAAGTGGGCTGGTTTTACTCGTCTTGCTGTTC 11313 28 100.0 32 ............................ TGTTGAAGTTACAGAATATTATGCAGAATGCT 11253 28 100.0 32 ............................ AACCAGACAGAAACAATCGAGCGAACCATCAA 11193 28 100.0 32 ............................ TCCACCAAATCTATGGGGGTGTTCTGGATTCG 11133 28 100.0 32 ............................ ATCCCGTGACAGCGCCAAGCTCTGTCTTGTAT 11073 28 100.0 32 ............................ GCCCTGAATGCGTCTATCGCCAGCCCTCTCTC 11013 28 100.0 32 ............................ AGGTACTGGATAGGCTCAATACTGAATCAGAT 10953 28 100.0 32 ............................ AAGGGCTGGGCAGTTGCCGCTGGCATCACTCA 10893 28 100.0 32 ............................ GGGCAGCCGTGGAACGGCGCCACCGGCAATGA 10833 28 100.0 32 ............................ GACCAGAAACCGCCGCCCGGCGGTTTTTTACT 10773 28 100.0 32 ............................ TTACTTGCGAGTTAGCCAGTACAGGACGGCTA 10713 28 100.0 32 ............................ ATCAAGTTTTCCAGCCGCTGGGCGTCCATTGC 10653 28 100.0 32 ............................ AGGTGCGAGTTAATCCAGGACGCCCTTAACGA 10593 28 100.0 32 ............................ GTTACAGCGAGCGTAAGAAGACAGTGAAGGTT 10533 28 100.0 32 ............................ GTTCTCAGGGGTGAATGTCAGGATGCCTCGGC 10473 28 100.0 32 ............................ TGGCGCATAGACTTGGCGAAGTTGTCCATGTA 10413 28 100.0 32 ............................ ACCGACAAGCGCAGCGTTGCTTTGGGTAAAAC 10353 28 100.0 32 ............................ TACAGAGGATTGCAGCGTCGTTATGTCTTGGG 10293 28 100.0 32 ............................ TCACTAAAAAGCTCTCTGGAACCAATACCGCT 10233 28 100.0 32 ............................ TGCCGACATCGGCCGGAGCAACCATCGCGGTA 10173 28 100.0 32 ............................ AAATCAGAATTGGCAAGAGATAAGGTCATGCT 10113 28 100.0 32 ............................ AGGCAATGATCCCGCTTTGCATGTGGCCATGG 10053 28 100.0 32 ............................ ATGAAGTCATCGCCGGCGAAAACCTGCTGGAA 9993 28 100.0 32 ............................ GTTAACCGCGTCACCCGGTAAGAGTCATGCGT 9933 28 100.0 32 ............................ AGGCAAAGGCGCAGGCGCTCCAAAACTCGAAC 9873 28 100.0 32 ............................ TGGGCGCAGATGTGCTCACCGACACCGGGGAA 9813 28 100.0 32 ............................ TACAGGTGATGACGCCGAGGCGTTTGACGAGA 9753 28 100.0 32 ............................ GCCTTGAAGTGGCGCCTCGTAAGCCGCTATTT 9693 28 100.0 32 ............................ GGAAAGGGGTTGTTATGGGTGGCTATGGTATT 9633 28 100.0 32 ............................ GCTAGGGAATGGCGATGTTGTGTGTTTTAAGT 9573 28 100.0 32 ............................ GCTTAGTATTGTTGTCAACCGCTGATTATGGA 9513 28 100.0 32 ............................ ACAGATCCAGAGCAAGACAAGTGCTCAGGTCT 9453 28 100.0 32 ............................ TCGATAGTTGAGTTGGCGGCCGCGGCTCGGGA 9393 28 100.0 32 ............................ ATAGTCAGAAATGGTTTGATAGTCTGCTATGG 9333 28 100.0 32 ............................ TCACAGTCAAACGCATCACGCAACTTTTCAAT 9273 28 100.0 32 ............................ CGCCAGTTTACGGGATACAGATTTGCCCAAGT 9213 28 100.0 32 ............................ AGCCGCAAACCCTCAACATAATCACTACCTCA 9153 28 100.0 32 ............................ AGCGTGAAGAGCAAGAAACCATTATGGCCAAC 9093 28 100.0 32 ............................ GATAGAAGTGGATGAGCAGAGCCAATGGCCCA 9033 28 100.0 32 ............................ GTCCGAAAAGCGAGCCAACTAAGATGATGCGT 8973 28 100.0 32 ............................ CAGGAGTGTAATAGTTGCCAGTTACGGGAGAC 8913 28 100.0 32 ............................ TCCAATCCCAACGTCTTGCGCAACGTAGAGCG 8853 28 100.0 32 ............................ ATGGTCGGCTGAATGTGATGGTTACCCCGCCC 8793 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 50 28 100.0 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCTTTTCGATTGCTACGGGCTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTATTCAACAGGGTAAAAATAGGTTTTTTATCCTAACTACCTGTTGTGACTTTCTTTTATTGCTTTATTCTATT # Right flank : GTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAATATCCGAATTTCCTGCATTTATGGGGCTGAAGAGGCCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCTGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGCCCGGCTCTGGGTGGGCGCCATTCCAGGGTTTGACCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTATCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACACCCTTCAAGGGGGAGCGGATAAGCGGGGCCGAGTCGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGATGGCCAGAAGGCAAACACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //