Array 1 589188-587179 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSGQ01000016.1 Vibrio cholerae strain N2757 NODE_36, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 589187 28 100.0 32 ............................ ATAAACTCAAGACCTTGAGCCTTTTTGTTGCG 589127 28 100.0 32 ............................ ATTAGGGATCACTTTTAGATTCACCCCTTTAT 589067 28 100.0 32 ............................ TTTAGTTAAATCTGTGATTGCTGCCGCTGTTA 589007 28 100.0 32 ............................ GTGAAGCAATGACCGCAGTTCGCGGAATTATC 588947 28 100.0 32 ............................ AGTCTTGGTAGGCTGTCCAGCTCTGCAAATTC 588887 28 100.0 32 ............................ TCTTGAATCAGGCCGTCAGTAAGCCCTTGACG 588827 28 100.0 32 ............................ GCGCTGCTCTTTCTGCTCGGCTACACTGTTGT 588767 28 100.0 32 ............................ AATGACACAAGCCCAGTTCGATGCGTTCACCT 588707 28 100.0 32 ............................ TTAGGGTTGTGAAAAGATCTGACAATAATAAA 588647 28 100.0 32 ............................ TCGAACGGCATTCCTTCGACTCGAAGGGTTGC 588587 28 100.0 32 ............................ TTTATTAGATTCTTCCTCAAGGTTAGGGTTAT 588527 28 100.0 32 ............................ TGCACGGCAATATCAAGATCCCACACCGAACC 588467 28 100.0 32 ............................ ATTATCCGGCCCTGACGCAGCGCGAGCGATAT 588407 28 100.0 32 ............................ GAGTTCGGATTAACAAGTGTGGTGTTCAATGG 588347 28 100.0 32 ............................ ATCCACCGCGGGTGGTGACTATGCGATTAATG 588287 28 100.0 32 ............................ GAACGTCGAAGCGCAATTCGAACAAGAAATCG 588227 28 100.0 32 ............................ GCTATGAACGTGACCTAACATCTCTTTACCCG 588167 28 100.0 32 ............................ TCGATAAAGCGCTAACTCATCTTCGAAGTATT 588107 28 100.0 33 ............................ ATCAATGCAAACCTGTACTTTTTGACCATTTTT 588046 28 100.0 32 ............................ AAGAAACGTGAACTGGATGACATGCTGCCCGA 587986 28 100.0 32 ............................ AAGTTGAATCTCAAACTGTTGGTGGGCGTTAG 587926 28 100.0 32 ............................ GTGAGTGTTGCCCACGCCGTTGGTCACTAAAC 587866 28 100.0 32 ............................ AATTTAGGGCGTCACCCTTTAAGCACAGAAGC 587806 28 100.0 32 ............................ TACTCACTAACAAGGTGGTATCTGGAACAGCA 587746 28 100.0 32 ............................ ATATACGGCGCAGGTTTGCCGATGGCCGTCAT 587686 28 100.0 32 ............................ TAAAGCGAAAAAATACCCTTCTGGTATTTTTC 587626 28 100.0 32 ............................ CTTCTTCACCCTGAACCCCTACGTGGTAGCGC 587566 28 100.0 32 ............................ AGTATTGCGAGTTGGCTTGCTGCGAGAGCGCG 587506 28 100.0 32 ............................ CTACGACACAGGCTACCAATTCGCCTCTATTC 587446 28 100.0 32 ............................ GTAAAAGCTGGTATCACCTGCATCTTTGTGGT 587386 28 100.0 32 ............................ TCACGATGAACGTATCCACACTAAGAACAAAT 587326 28 100.0 32 ............................ TAGCAACGGCTCGAACTCTAGCCCGTGTTCTT 587266 28 100.0 32 ............................ TTGAAAGCGCATACGGTAAGACAGTGTTTGCT 587206 28 89.3 0 ...........C.............TT. | ========== ====== ====== ====== ============================ ================================= ================== 34 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATGTAACTTATGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCTGGTAAACCGCTGGTGGAATGTTTAGTGGATTTACAACAAAGCAAGCCGACAGCGTTGTGCTCCTTGCCCTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGTTCACCAGAAAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCTCAAGATGGGGGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCTACTGTACCGCACTTTTAAATTGAACGAAAAAGGGTAGTTTTAACCATTTATTTTTGATCTTTAAAAATACGCTTTTAAAACAAATAGTTGCAACGGGTTGTTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACAGCCTGTTGCAGCTTATTTTTATCGGTTTATTCTATTG # Right flank : GAAAGTAAATCAAACGAGGCAGTTCACTTTCTAGATTACGTTAAGGTTCTTACGTTCTGCTACGTATATTTATTAGGGTTTTCTTAAATGGTCTTTTCCCAAGCATTAGTGACAAATTTCCGAGGTGTAATGATTAAGATAGCCCAGTTGATGAGTATCAGTTGAGGGGTAGTCACCATGAGCATCGTTGGTTGTGTTAATATCAAATCCAAGCATATCGATCGAACATGTCAGATGGTCTCGTAAGCCAAGTTTTACTCAGGGCGAGTTTTGCGTCAATAAAAATCCTTTTAGAATCATAACGTAATGAGCTATTGGATTACATCAGCTTCCATGTCTTAAGTGGAGGTTATATTCTAGATTATTTTCAATTGCCGAGTACCAGTCACAGATAGGCTACCTTTGGCGGCCTCTTCTATATGTCCGCTCCACCAGCTCATCATTGGCTTTCTGCGTTCTAAGTAGTCAGTGCGGTTATAGGCGCTACGCACTTGGTTGTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //