Array 1 155134-153275 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMS01000005.1 Corynebacterium sp. 7B NODE_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 155133 28 100.0 33 ............................ TGCCGTGGCGTACACGGCTGGCAACAGGTCACA 155072 28 100.0 33 ............................ TGCGTAGCGACACCACGATCTGCTCAGCGTCGG 155011 28 100.0 33 ............................ GTCGCCGCTGGGTAGCGTGTTTATGGATAGCAC 154950 28 100.0 33 ............................ CGGAGCGCGCCGCAGCGGGAATGTTGTCAGCGG 154889 28 100.0 33 ............................ GAGAGAGAAACACACACAGAAAGAGAGAAAAAA 154828 28 100.0 33 ............................ GGATGATACCGAGTATGACACTGAGTGGATGGG 154767 28 100.0 33 ............................ ATCACCACCGGCCCCGAGGATGGCTGGAAACAA 154706 28 100.0 33 ............................ CTCCCGGTCCTTCTCCATGAAATCGCCGTAAGC 154645 28 100.0 33 ............................ GGAGACAGCTATGACCCCTGCTGAGCTTGCGCG 154584 28 100.0 33 ............................ CCTGCGTGGCGCGGACCTGCGTGGCGCGGCTAC 154523 28 100.0 33 ............................ CGCCTCGAATAGTATCTCGCCGGCCCCGTGTCG 154462 28 100.0 33 ............................ CCACGGATCAGGCAGTGGGCAGTGACTCCGCCT 154401 28 100.0 33 ............................ CTGCCTAAGGCGGTGGGGGATAAACTGACTGGC 154340 28 100.0 33 ............................ TGTGGAGTCGGGCGGCTACCCGTCGCGGGTCAA 154279 28 100.0 33 ............................ ATGCCCTGGTCTGGAGCCGCTCCGCTCTGGGAG 154218 28 100.0 33 ............................ GGTATCTAGGAAAATGTCGCGGATAATCTCCAC 154157 28 100.0 33 ............................ GACCTGCTTATCCGGCGTGGCTACACCGCCTTG 154096 28 100.0 33 ............................ GTGAGGAACTGGAGACCAACGCGGCTGATCTAC 154035 28 100.0 33 ............................ GGGATTTTGGGGCATGATCACCGACTTTTTCGC 153974 28 100.0 33 ............................ GAACACCAATATCCGGCGATCCCGCATCGATCC 153913 28 100.0 33 ............................ GAACATTCACGTGACTTTTGATCGCTCGCTGGA 153852 28 100.0 33 ............................ GGAGCTCGCGAAGAAGAATCAGGCCGACGGCGA 153791 28 100.0 33 ............................ CGTGGCAGTAACATACGAATCTTGGTTTTCGTC 153730 28 100.0 32 ............................ CTCCAGAAAGGGAGAAGAAAATGACCACCTAC 153670 28 100.0 33 ............................ GCTTCACGCATGAGCAGCGCGTTCGCCTCCGAA 153609 28 100.0 33 ............................ CTGACCTCTTTACCTCGCTGGCTGATCTAGACC 153548 28 96.4 33 ....................C....... CATTTATCAGTATGTGGCCGACTACATGGGCAA 153487 28 100.0 33 ............................ GCTCACACCCGACCACACCTCTGGCTCCCACCA 153426 28 100.0 35 ............................ CACTCTTATGCTGTGGGCTTTTCCCGAGCCGGCGT 153363 28 100.0 33 ............................ GCCCGGATTGCCTGGGATGCCGGTTTCTTCGCC 153302 28 92.9 0 ..........................TG | ========== ====== ====== ====== ============================ =================================== ================== 31 28 99.7 33 GTTTTTCCCGCACGCGCGGGAGTGGACC # Left flank : TTTTAGATGGCGGTAAGACAGAGCTATCTGGAGGGTGGCTTGCCGCCAATGGCATCGTATTCAAACGTATCCAGGACGCCCCGCCTGTCAGCGTTGAGATGATGCTTCACGCTAGTAAAGGATGGCAGACCTCCCCAGAGCTTGGAGCATCTGACCATCTTCTTGACCGGCTCTCGGATACAGCGCCCGACACGGTAAGAGTAGAAGAATACTTACCTATTACCGTGGGCATAGCCGTGTCAGGGCGCCCATTGGCCCAACACGGAGTTGCTCATCTCAAAGGCCGAAAGAGGTTTCTTCCGCGCCCGACATATCCAGTAAGTTTATGGACTCTAGAGGTTCTATCGAGGAGACACCGTGGTTCTGGTCTGATGGCGGAGGAGGTGACGCGCGGGAAATTTAAGACTGTTGCTCCACCGGTCGTAGTTTAGTTCTGTAAAGGCAAATAGAAGTTGAATCTATACGCCTTGTTTGCTCGTTAAACCTGCTGTTCGCAGAGT # Right flank : CAAGCTCCTGTGTTTGCCTAGCGAGCCAGTCGAGTTTGCCAAGGTCACCAAAAAGTGACTTATTGTGGAGCGTAAGGGGCATCGCAACGCAAGGTGTCCAGCTGTCACCTTGTTGAAAGCATGCATGAAGCATCGTTTCCTGAAGCGGTTGTGCCTTGGCAGCGGTACTGGTTTGTCCGCTGTAGCTTGTACGCCTGTGACAGGAATCGGTTGCTGGGCACTGAAGACTCTTTCTTACTGTGGTCGGGCTGCATATGGGCGGCCACCAATTACCGATCTAGATCTGAATACCACTTATCTAGCGATGTACCGATCCAGTTGAGTAGTTTTTCCAGAGCGTTTTAGGTGGAAATTTCACCGCTCCCGCGTTAACTACTCCGTGGTCGTAGCGATACTTCGTTTGCGCTTCTGTCTTGAGTACGGCGGGTGCCGTTTTCAGAAGTGTTCGAATGGACGGTAGAAAACATAGATGCGGCCCTATCCGACGAGGGAAACCTCGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACGCGCGGGAGTGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-10.90,-11.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 105148-106945 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMS01000007.1 Corynebacterium sp. 7B NODE_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 105148 29 100.0 32 ............................. CTCACCGGCGAAGCATGGGTGAGTGGCAATGC 105209 29 100.0 32 ............................. GCCGTAGTGAGCGGGCGGTCGAAGGTCGGCGG 105270 29 96.6 32 ............................G CACGGCCCAAAACAATACTGGTAGTGAGCGAT 105331 29 100.0 32 ............................. GCAGATATCAACTCTCGGTCTATCGGTATTGA 105392 29 96.6 32 ............................G GTCAAGGACCTCGGCTCTCAGGGCAAAATCAC 105453 29 100.0 32 ............................. TCTGCAACGTGTAGGAACATCTGTCTAGCGCG 105514 29 100.0 32 ............................. GCTTATTCGAGCGCTTGGGCTGTTCGGTGGCG 105575 29 96.6 32 ............................T ATGACTCCGCTACTGTCAGCGACCGGGCTAGC 105636 29 96.6 32 ............................T CCCCAGTTCGGAGGGGGAGTACACAGTGATCC 105697 29 100.0 32 ............................. TGCTGGGCTTGCTGCGCGTGCGGCTGCAACCA 105758 29 100.0 32 ............................. CCGCCACAGATGGACTGGGATTACATCTACTC 105819 29 96.6 32 ............................G AATTCGACATCGACGCCATCGCGGACGAGGTG 105880 29 100.0 32 ............................. CCGTCCCGACAGCCGATCACCACTACTGCCGA 105941 29 96.6 32 ............................G TCGCCGCTGGGTAGCGTGTTTATGGATAGCAC 106002 29 96.6 32 ............................T CATCGACGCCGGCTACCGCGGAGAAATCGGGG 106063 29 100.0 32 ............................. CGGCGCCCGGCCGCCCCCACGGCGCGTGGATA 106124 29 96.6 32 ............................G TAAGCCCCGCCGTGTGCGGGGTTTCTCTGTTG 106185 29 100.0 32 ............................. GCCTTTTGGGCCAATGTCAAGAACATTGGTGA 106246 29 100.0 32 ............................. AAAAAACTGTCGCGCGTTGAGGACCGCGCCGC 106307 29 100.0 32 ............................. ATGGGCGCGGCGGCCGGCCGTTTGGGCGCGAC 106368 29 96.6 32 ............................T CAGTGCGCGGCGCAGCGGCTCGGTAATTCTAT 106429 29 96.6 32 ............................T TCCCACTCGGGCAGCGCCGGGTCGGGGTTGAT 106490 29 100.0 32 ............................. TGGTGCCCTTCACCGAGGCAAGAGCATTATCC 106551 29 96.6 32 ............................T TGCTAGATCCGAAACGGTCGATCCGCACCGAG 106612 29 100.0 32 ............................. TGTGATTATCCGCACCGGCAGCAGGCCGGAGC 106673 29 100.0 32 ............................. TTTTTAAGCAGGTGATTCTCGGCATCTACCAG 106734 29 100.0 32 ............................. CAAAAGTCCTCTTCGCTGAGCTCGGGGTCAAG 106795 29 96.6 32 ............................G AGGACTCGGCAGTAGTCGACTACATTTTCCGC 106856 29 96.6 32 ............................G TCGGCTCCCTCGGTGAGCACCTGCACGGTGGC 106917 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 30 29 98.5 32 GTTTTCCCCGCACACGCGGGGATGAGCCC # Left flank : TGTCCTGACTGCGGATGCGGAGCTATTGCTATGGAGTGAATTGGAGCTTGTGTCCTCGGGTGTCTCCTGGGCTGAACCGGCGAGTTCATCATGATCGTTCTCGTAGTAACAGCGTGCCCTGCAGGCTTACGGGGGGATCTGACTAAGTGGCTCATGGAGATTGCGCCGGGCACGTTTGTGGGAACTCCTTCAGCCCGGATCCGTGACCTGCTGTGGGATAGGACCGTAGGCCTCTGCAAAGATGGGCAAGCCCTTCTCGTGTATTCCGCCGACTGCGAGCAGGGCTTCGAATTCAGGACGCATCGCCACAAGTGGATGCCTCGTGACTTCGAAGGCCTGACCTTGATGGTTCGCCCTGGAGCGTCGGACACGCCACGGCGACGTACTGGCTGGAGCAATGCCCGACGCCAACGCCGCACCTACAGATCGAGGTGAGAACTTCCCGCTACAAGTTGTAGCTATTCTGAGCTAGGCGCTAATATTTCACCAGCTCAGTAAGT # Right flank : CACCATCTCGTGCGGCCTAGCTCCGCTTCCCAGTTATTTCTAAGGACTGCCACCCGTCGCGTATGCCGAGATAAAAGTGTGCGCTACGGGCTGCGAGGTGTGCGTGGTGTCTATTGCGCGTTGCTGCGCGGTGTGGGGGTGGCCCTCAGCCTGCACTGCAGTGTCGCTGTTGGTTGAACTGGTTCCTGTGGCACAGCCACCATTCAGTCAGGGGGGCCCTGGCTCTGGTATTTGATTACTGCGGGTGAACATCGTGTGGTGTGTGAATACAGGCCAGGATGAGAGCACTCAAGCCAAGATTCCTAGACGCCCCACGATCACCTTCTATGCCCTCGGTGGTACTCATCGTGCCGTAGCCGCGGATAGGGCAATGTGGGCGTCGATCATTGGCTTGTCCTAGTGTGCAGTACGTAGTGATGTTGCTCTCTAGCCACGGCGGGTGGCTCACCGAGAGGGTGAGTCAGCTGTAGGGATTAGTGATACTCATCGTGTGTATCGAT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACACGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 40675-41094 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMS01000013.1 Corynebacterium sp. 7B NODE_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 40675 36 100.0 28 .................................... CGTTTATCACGCTGCCGCACGATCATCA 40739 36 100.0 28 .................................... TGACTCGATCGCGCCGACGCGGACGAGA 40803 36 100.0 28 .................................... GCCCGTAGAAGAATCCACTGATCCCGGC 40867 36 100.0 28 .................................... TATGCGGGCAGTGTCAGTGATGGTGTCG 40931 36 100.0 28 .................................... CAGCAGAATGCCGTTGCCAGCCAGCCGC 40995 36 100.0 28 .................................... CCATCGTGGGTGGCGATCGTGACCCCGA 41059 36 97.2 0 .................................C.. | ========== ====== ====== ====== ==================================== ============================ ================== 7 36 99.6 28 GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Left flank : CATTCAACAGCGATGGCCAGAGTGTTTCTACGGTCTTTCAAGACTTTGCGCAGCATTTTGGCTTATACGTCGAAGGAACAGTGGATCGGCTACAGGTGCCACGTTGGGAAGGGCAGCTCAGTGCCAGCGAAGGACAGTGAACCGGTGTGGTGCGTCGTAATGTTTGATCTTCCGGTCAAGACCAAAAACCAACGTAGGGAAGCTAATCGGTTCCGTAACCGGTTGTTCGACCTTGGTTTCTGCCGCGCCCAGTTCAGTGTCTACGTTCAGTATTTCCCACTGGCGGCGCGTCTCAGCACGATAGTAAAACAGGTGAAATGCGAACTTCCCGCAGGCGGTGAAGTGCGTATCTTGTCCGTGACAGACCAGCAGTGGGCAAAGGCGATCCGTTTTTCGAGCCACAAGGAACAAGCGGTCGAGAAAATCCCCTCTCAACTCACGATTTTTTAAAAACGCATGCTGAAAAAGACCCAGTTCAGGCCCTGTTTCTGGGCCTGACT # Right flank : CGATAGTGGGCACAGTGGCTATCTCGGTGCAAGCCTTTGGCGGTACATCACGCTTAACGGCAGTACCGCTTTCCACGTGCTGCGCTGCGATGATCCTACAACCACACACTTGTGAATTTCTGTAGGATCACCGCCCCGCGACCTACCGCGTCGCCTCCTCCAACAGGTACAGCACGTGCTCATAGCTCCGCCCGGTGATTTGCTCCATGCCCAGCTCGCAGGTGCGGTTGGAGGACACATAGGCGTCCACGCGCCCGTTGGCTTCGGCCTCGGCCAGCCCGACGCGCTCATCGCGGGTGGCGGCGTCGAGAAGTTCGGGGTGGAGCATGCCGCGGTCTCCGGCGGTGCCACAGCAGCCGGCGCCGCGGGGCACGAAGGCCTCCTCGGCGGCGAAACTGGCGACGCGCACGAGGGTGTCGCTGAGTTCCATGTGGGCCAGCGAGCAGTTCGGGTGCACGGCCACCCGCCCGAGGCGGCGGGTGGGTTCAAGGTGCTCAATG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //