Array 1 19361-19932 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VSEK01000005.1 Aggregatibacter actinomycetemcomitans strain PN_648 5, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=================================	=====================================	==================
     19361	    33	 100.0	    33	.................................	AATTGCCGGTTACAACATCATGTACGAACCACG    	
     19427	    33	  97.0	    33	................................T	ATCGGTGTGGTAGCGCAGATTCCAAATGTTCAT    	
     19493	    33	  97.0	    34	................................T	TGGTAAGTCGCTAATAATTCATTTAACTTTGAAG   	
     19560	    33	  97.0	    37	................................C	GCCTGGATTAACAGCGAAGAATACGCCGATAAATTCA	
     19630	    33	 100.0	    35	.................................	GCCTTAGAACGTTATTATTTTGACGGCGATTGGCG  	
     19698	    33	 100.0	    35	.................................	ATCAATTGAATGTGGCTTTTGTGCAAAGTTGTTGG  	
     19766	    33	  97.0	    35	................................G	CCTGCGTCCTTGTATGCACACCCACACTTTTTCCC  	
     19834	    33	 100.0	    33	.................................	CTACCGGCACCTGGAATTGGTTAGCCAATACCC    	
     19900	    33	  81.8	     0	.......T....G.....A.C...T......T.	|                                    	
==========	======	======	======	=================================	=====================================	==================
         9	    33	  96.6	    34	GCAGCCACCTTCAGGTGGCTGTGTGTTGAAACA	                                     	       

# Left flank :   TTGATGAGGTGAAAAATGTTAATGTTGATTACCTATGATATTTCTTTAGAAGACCCGGAGGGAAAAACCAGGTTGCGCCGTATTGCGAAGCATTGTCTGGATTATGGCGTACGGGCGCAATATTCGGTGTTTGAATGCGATGTAACGCCGGATCAATGGGTAAAATTGAAGGCTAAGCTACTGGCGACTTATGATCCGGATTGTGATAGTTTGCGATTTTATCACCTAGGCAGCAAATGGAGACGCAAAGTGGAACACCACGGGGCGAAACCGGCGGTGGATGTGTTTAAAGATGTGCTTGTTGTCTAGCTCGCTAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGA
# Right flank :  AGGCGCTTTGTTACATCTGAACTCTGACACCAACTAAACTAAGCACCTTATAAAAATAAGGTGCTTTTCTTTTCCCGCAAACCAACACAAAACTCCTTGCCCTTCCTCCGCAAAATATATAGACTGAACCCCGTTATTAGTCAGGGTGCTTTGTGCTGAGATGATACCCGTGAACCTGATACAGTTAATACTGACGTAGGAAACTAACAGAGAATCACATTCCCTTTCTTTTTTCTCTTCTTTTATCGTCATTATTGCTGATTATCTTTTTTTCGTTAAAAAAAGGAAAAATTATGCAATATGGTTTTTGTTGTCCGTTATTTGTAAATAACGGAGGGCGTGATGAGTAAGGTTGCGCAAGCGTTGACCATCTTCGGTTCGGACAGCGGCGGCGGCGGTGCCTGGGTTCAGGCGGATTTGAAGATGTTCCAAATGCACAGGATGTCGTTTGGTTCATCGGTGGCCGCGCAAAATACCTTGAACGTGGTTGATATTTACGC

# Questionable array : NO	 Score: 5.90
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCACCTTCAGGTGGCTGTGTGTTGAAACA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.40,-3.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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