Array 1 8566-9127 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANNH01000011.1 Campylobacter concisus ATCC 51561 Contig_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8566 30 96.7 37 ....A......................... AGTTTCTCGTGTGTGCCTTTGTCGTTGTAGCTAACTG 8633 30 100.0 37 .............................. AAATATGGCTCGTCTTCTGCGTATCTTACACCTTCCA 8700 30 100.0 36 .............................. TTGTGCCTAATGGCAGCACGTATAAGGCTGATTTAA 8766 30 100.0 38 .............................. CTAAATAAGGCAGGTTTTTATTTTTGGGTCGCTGTCGT 8834 30 100.0 34 .............................. GCGTCAAATCTATACTAGCTCGCTCCTCTACGCC 8898 30 100.0 36 .............................. GTGTGACCGACAAGTGCTGTTTTTTGCATTGTAAGA 8964 30 100.0 36 .............................. TATCAAGGAGAGGAAATGAGCGAGATAGTAGCCCTA 9030 30 100.0 38 .............................. TGGATAAGCAGTTTGGCATTCCGCCTAACGCTTGGTAT 9098 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 9 30 99.6 37 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GAGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGATAAGCCTGCACCTCGATCTTGCCGAGATTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTTAAAAAGTGCATCTGCGAGGACGTGCCTTATGAGGGCTTTGGGTGGGAGTAAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAATGCTTGAAATTTAGGGCTTGGCGTATTTGCACATGGCTAAAATTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCATCAAAAGGCCTATAAATCAGCTTTTTGGTGCT # Right flank : CCCACCAAACATGGTTGGCGATAACCGCAATCACTCTTTTGATAGTCGTTTTTTTGGGGCAGTTTCATACAAATTTTTAGTTGGTAAAGTTAGATGGCAGCTGTTTTAGCACAAATTAGCAAAAAACCTTGGCTAAAGATTATAATGAAGCAAATTATCGTATTAATGAAATTTAAAAAAAGTTGTGAAATTTTTTGTCAACTATAATTAAAACAAAAAATATATGAATTTCTAAAACCTACTTGTAAAAACAAGCAGGTTTTAAAATGTTTTATTTCTCTAGTTTTTCTTTAAGTTTTTCTTTTTTAGATTTAGCTTTTGAAGCAGCTTTTTCTTTCTTTTCTTTTACTTTGTCAACGACTTTGTCTTTTTCATCTTTTGCTTTTTCACTCATACTAGTTTCATCTTCTTTATTAGAAGTTAGCTCTTCTTTAGTTTTAGAAGCTTTCTTTTTAAATTTATCTTTTTTATCAGAGATTTTTTCTTTCATCTCGTCTTTT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //