Array 1 35795-42795 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHTLH010000011.1 Acinetobacter baumannii strain 36-1454 NODE_11_length_102720_cov_60.651740, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 35795 30 100.0 30 .............................. TATTTGGATCTGTGTATGGTGTGTTGCGGA 35855 30 100.0 30 .............................. GTCGCAAGAACACACATAATGCCAAGTGGA 35915 30 93.3 30 ............................GT GTCGAAAAGGGTTTCGAGCAATGGAAGAAA 35975 30 93.3 30 ............................CC CAAGGTTACCCAATATCTCGGGCTTTTGTT 36035 30 96.7 30 .............................C CAGATTTACCGCCTGAAAGTAATACGATTT 36095 30 93.3 30 ............................AT GCGGCAATATCTTCTTTCAGCTGCAGTAAG 36155 30 96.7 31 ............................A. ATGGTTGGTAGTGCCACCGAGTCAACATACC 36216 30 96.7 30 .............................T ATGGGAGGCTGGTTTTGGAACGCTAGGCTC 36276 30 93.3 30 ............................AA GCGCAACTGAGGGCGACTCAGGCGTTGATT 36336 30 100.0 30 .............................. AAAATCTCGAAACAGAAATGGGGGATTGGT 36396 30 96.7 30 .............................T GTGTGCCAATTAAAGAATGCTTGCGACTAC 36456 30 96.7 30 .............................T AATGCTAAGAAAGATATGCTTGAGCAAGTC 36516 30 100.0 30 .............................. GTGCAGCATGAATATGAATCGTGTAAGTGT 36576 30 93.3 30 ............................AT GACTCGCGAAGGAGAATGGATATCCATTTT 36636 30 93.3 30 ............................GC AAATCAATCCATCTATTTAGAGGTATATCT 36696 30 93.3 30 ............................GT TACGTCTACGGTACGTGGTTAGCATGATTT 36756 30 93.3 30 ............................CC TGCCGTTAATTCACCGCTTGGGTGATAGAA 36816 30 93.3 30 ............................GC AGGGAAAAGTATAGCTTTAGATATATCCCA 36876 30 100.0 30 .............................. TAAATATTCGTTTTTATTTTTTTAGGTCAT 36936 30 96.7 30 .............................T GCTCTAAGCATTCCGAAGCAAGGAAATGTG 36996 30 93.3 31 ............................AT CACATTTTGGGATGGCAATAGCATTATTTGT 37057 30 100.0 30 .............................. ATCTTTGCAACCAAGCATTCAACGAATCCA 37117 30 93.3 31 ............................AA TTTCATGCTTATGTGCTAAATTCATATTTCA 37178 30 93.3 30 ............................GT GTATTACCGTCATTTTTATGATGGTACATG 37238 30 96.7 30 ............................A. TATCCGTTGCATTAATCGCTTTGGCTCAAA 37298 30 93.3 30 ............................GT GTTGTAATTTCGCTTGTATTGATCATTGCC 37358 30 93.3 30 ............................AC ATACCCCATATAACGGTTATTGTAGTTGCT 37418 30 96.7 30 .............................C AATGTTATATCACATTAGATTAACAAAACA 37478 30 90.0 30 A...........................AC ATCGATGGCAGTTTCACTTTCTACTGCAGG 37538 30 96.7 30 .............................C CAGAAGTGTCACCGCCACCCTTAACACCAG 37598 30 93.3 30 ............................GT CGGTCGAATGTCTGGGACTTTTTTGTTATA 37658 30 93.3 30 ............................AA AGGCATACACCCAGTAGAAGATAGACAAAA 37718 30 93.3 30 ............................AT ATATGTGCGTAACCGAGCAAGCTTGTCACG 37778 30 93.3 30 ............................AT ACCGAAAGATGACAAAAAGCACCCTAAGGT 37838 30 93.3 30 ............................AA GTGAAAAAAGCTGACAGCAAAATAAACTCA 37898 30 93.3 30 ............................AC TTCATAGAAACCGGCTTTCGGAAAGTTATC 37958 30 93.3 30 ............................GT CCAAGTCTTAAAGATGTTCAATGGGCAATG 38018 30 93.3 30 ............................AA TCGAATCAAAATATTAAAGAGTTACGTCAT 38078 30 93.3 30 ............................AA TTCGTGTTGACCAGGAATTAAAAGACACTT 38138 30 93.3 30 ............................CT CAAAGTATTTAACACGGTTGTTAGCAGGAT 38198 30 93.3 30 ............................CA AAAAAGAGCTTGCATATACAGATTCTAGTA 38258 30 96.7 31 .............................T GGTGTTGAACAATGCTTAAGTGAAATCACAA 38319 30 96.7 30 .............................A TATCAATCTTGTTAAGAGAAGCCGCATCAT 38379 30 93.3 30 ............................GT GATGTGTATGTTCTATTAGTGGTGTAAATC 38439 30 93.3 30 ............................AA TCCCGCTTAGAACTTGTAAACAAAATTCTG 38499 30 96.7 30 .............................A GTCCCGAAATTTCAGTAGGTGGCTCATAGC 38559 30 93.3 30 ............................AA TCCCGCTTAGAACTTGTAAACAAAATTCTG 38619 30 96.7 30 .............................A ATACACCAATCCCGCTTAGAGCTTGTAAAT 38679 30 93.3 30 ............................GC AATCTGGTTATCCGATTCCTATTTATTTTG 38739 30 93.3 30 ............................AT CATCATTGCAGTCTTATAAGAGCCAGGCTG 38799 30 93.3 30 ............................AA ACTGCATAGATGACCATTAGAGACATCCCC 38859 30 93.3 30 ............................CC TGCCGTTAATTCACCGCTTGGGTGATAGAA 38919 30 93.3 30 ............................GC AGGGAAAAGTATAGCTTTAGATATATCCCA 38979 30 100.0 30 .............................. TAAATATTCGTTTTTATTTTTTTAGGTCAT 39039 30 96.7 30 .............................T GCTCTAAGCATTCCGAAGCAAGGAAATGTG 39099 30 93.3 31 ............................AT CACATTTTGGGATGGCAATAGCATTATTTGT 39160 30 100.0 30 .............................. ATCTTTGCAACCAAGCATTCAACGAATCCA 39220 30 93.3 31 ............................AA TTTCATGCTTATGTGCTAAATTCATATTTCA 39281 30 93.3 30 ............................GT GTATTACCGTCATTTTTATGATGGTACATG 39341 30 93.3 30 ............................AT GATCTACCCTTTGAGCTAGATAAAACTTTT 39401 30 96.7 30 .............................T CACGTGGTACGCGCTGTAAGCCTGTTTGTT 39461 30 100.0 30 .............................. AGTATCGCAAATCAAACATTGCCAAGCTTT 39521 30 96.7 30 .............................T AGATAAAGCAGGGGATAAAGGGACGTTAGC 39581 30 100.0 30 .............................. TAATACTAGAATCTGTATATGCCAGCTCTT 39641 30 93.3 30 ............................CA TTTTGCGACGCGCTGCATCGTTTAGGGATA 39701 30 93.3 30 ............................GT GTCGGGTAAAACAAGGGTAATGACTTGTGT 39761 30 96.7 30 .............................C TACAAAGGCAATCTGGCTCTTCAATTCGTG 39821 30 100.0 30 .............................. ATTGCGGACATTTAGTCTGCTGTATTTCTT 39881 30 93.3 30 ............................AT CGTGATCAAACCACATGCCTTCATCTTCAT 39941 30 93.3 30 ............................AC TTTAAGCGCAAACGAACAGCATCAAGATCA 40001 30 100.0 30 .............................. TTTCATCTGTCTTGATAGCTTCCCCCATAA 40061 30 93.3 30 ............................CA CTACGGACATAATCGAACATTTCCTGAAGT 40121 30 96.7 30 .............................T GTGCGAGTGTCTACGAGCCAAGCCGAAATA 40181 30 96.7 30 ............................A. TTGCTACTGAATTAGTTGTTATTGCTAAAA 40241 30 96.7 30 .............................T AGGCTGTGCTAGGTATTCGTCTGGTTCCAT 40301 30 93.3 30 ............................AT TAATATAGCTTCTTCCAACTACAATATATT 40361 30 96.7 30 .............................A TTTGCTACGCCACCAGCCATACCTAGAAGC 40421 30 96.7 30 ............................A. CCTGCCATAAAAGGCACAGCCGAATTTTAC 40481 30 93.3 30 ............................AA CGTCAATTCAAACGTAAAAAGCTACTGAAG 40541 30 93.3 30 ............................GT CAGTATTACTCCACACTTTTTATATTTCAC 40601 30 100.0 30 .............................. TACCTCATCAATAAAAATAACTGATGTTTC 40661 30 93.3 30 ............................AT AAAATCAACCCGTATTAATACCGAATGCAC 40721 30 96.7 30 .............................A ATAAAGAGGTTTTTAACTGGTATGAATCGA 40781 30 93.3 30 ............................CT CATGACGATGCTTTTCTAACAAAGTCATCC 40841 30 100.0 30 .............................. AAAAACGTAACGCTGAATTGCAGGCTAAAA 40901 30 93.3 30 ............................CA GCTAATAAATTTACAAGAATCTGATGTGTA 40961 30 93.3 30 ............................AA CTGAAGTGAAAATTGTTCATTAATGGTTAT 41021 30 96.7 30 .............................C ATAGTTAATATAAATTTATTATGACAAAAA 41081 30 96.7 30 .............................T AGCCGTTTGGACTTTACCAATCTATATTTA 41141 30 96.7 30 ............................A. CAATATCAATTACAGGAATACCACCAGCAT 41201 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 41261 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 41321 30 100.0 30 .............................. ATGCGGGTTGTCCACCAGTTATGACTACTT 41381 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 41441 30 96.7 30 ............................C. TCAAAACAATCAAAAAAGCAATGAGTACAA 41501 30 96.7 30 ............................A. TGAATGGGATTTATTCGCAAGGTGATATTA 41561 30 93.3 31 ............................AA AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 41622 30 100.0 31 .............................. CATCGAAGTCATAGAACGCTTTGAGTTTCCA 41683 30 96.7 31 ............................A. CGACTTTGAATTGATGCCATCTCCGCCTTTA 41744 30 96.7 30 .............................A TTCAGATTGGCTGCGGCCTCACCTGTAGCA 41804 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 41864 30 96.7 30 .............................C CATTCTCGCTAAGTGGCATCACACGCGATG 41924 30 96.7 30 .............................T GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 41984 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 42044 30 93.3 30 ............................AT CATCGAAATTTAGTTCTAATTCTTTAATTT 42104 30 96.7 30 .............................C ACTTCTCTTAATTAGTGCTGAAGAATCAAA 42164 30 93.3 31 ............................CT GAATAAGTGAGATGTCTCTATGAGTTCAATT 42225 30 93.3 30 ............................AT TGAATTAATACGGCTTACTGCAATTGGTTG 42285 30 96.7 30 ............................A. TCTTTAATGTCGGCAACATGCTGTGCAAAA 42345 30 93.3 31 ............................GT AAAAAAGAACATTTCCAGCAAAAATTGACGA 42406 30 96.7 30 .............................T GCTGCCTGCAAACTTGTTTGGGGCTTTATG 42466 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 42526 30 96.7 30 .............................T TAAAGCTAAATGAGGGTTAAACCTAAGAAA 42586 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 42646 30 86.7 30 .............C...T..........GT TACTGGGTTGCGGAATATATTCGCAATTAT 42706 30 83.3 30 A......A.........T..........AT TTTGATCTTTACTTATTCTCGCTTCAAACA 42766 30 70.0 0 .......A...T.....T..C...AGCG.T | ========== ====== ====== ====== ============================== =============================== ================== 117 30 94.9 30 GTTCATGGCGGCATACGCCATTTAGAAATG # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.16, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //