Array 1 1253-1021 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZBE01000030.1 Prevotella copri strain iAP1412 NODE_52_length_8406_cov_43.0419_ID_103, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1252 36 100.0 28 .................................... GACTTGGTATCGCAGGTTTGGCTACCAG 1188 36 100.0 30 .................................... CTCTGACGTATCTTATTCTTATACGCGTCA 1122 36 100.0 29 .................................... GATAATTTGCCATATTGATTTGATTTTGA 1057 36 86.1 0 ............G.C.........AC...A...... | T [1037] ========== ====== ====== ====== ==================================== ============================== ================== 4 36 96.5 29 GATGAACATGCATTATGAATAGTGGGTAAGTACAAC # Left flank : GAAACTATCTGTGTGGAAAATCTTTCAATCAAGGATGGTATGTTGCAGGACAAGAAACATGGTAAGCATAATAAGCAAAAACGTTCTCGCAATAAGCTTATAGTTGATGCAGCTATGGGCATGTTGCGTATCAAGCTGCAGCAGAAATGTAAGTCGAAAGGAATCAACTTCATCAAAATTGAACGTTATTTTCCTTCTTCGAAGACTTGCCACTGTTGTGGAAAAATATTTAAAGGTTTACAGTTAAGTCAGCGTTCATGGGTGTGTCCTTCATGTCGTGCAAAGTTGGATAGGGATGTGAATGCTGCTATTAATATTAAAAATTTTGGAATTAGCAATAGTTCCCTAGGGAGGTGTACCCCCGAAGTAAAGTCTGTGGAGCATCGTAAGCAGAAACGAAGAAATGCCAAAAGCAGTGACGTTTCAGATGTAGAGAAGCAGAAATAAGAGAGCTCTAACATTGAGCAAATGCCTGTTATACAGAATAATATTTATCTGAG # Right flank : ATGCAGTCGCTATCCATTCGGCTGACGTCTGATGGCTTTACTTTCAGAATTTTTCATTAGGCAAAATGTATATTACGTATTTGTTCTTCTCTACATATCTTGTATATCCTCTAAGATTCAGAATATGCAGATGGAATTAGTAAAAAAATAATTGATAGTTAATTATGGATAAGACAATAAATACAACGCTCATCATAGGAAATGGGTTTGATTTAAGTATGGGTAAACATACCAGTTATAAGGAATTTTATGAGAAGCTGGTAAAGAATAAAGGTTTTTGGGATACCTCAAATCCGCAACCTATAGGGTTTCGTGGGAATTTACTTGTAAAACGACAAAAATTCTTTTATTGTACATATTCCTTGGGCATAACAGAAACGTCGTAAACACAAAATTCCCTTACCCCATAAAGCGACTTGAGGTAATACGCCGGTTTAACCAGAAAAGCATGGCCTTTAACCAAAGTCTGTCTTGAACAGGTTAGCATAAGCATTGTTGTC # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGAACATGCATTATGAATAGTGGGTAAGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 59087-61682 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZBE01000017.1 Prevotella copri strain iAP1412 NODE_13_length_75973_cov_40.107_ID_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 59087 30 100.0 35 .............................. CCGTTTAATGAGCATGATACCCACGTTGTTTGTGT 59152 30 100.0 35 .............................. AGAAGTGACAAACTTTATAAAAAGTGAATATAAAA 59217 30 100.0 34 .............................. TTATAACTTTAATTACGTAGCCTAATGAAAAAAC 59281 30 100.0 36 .............................. TTGTTGATGATTTAGTTGCTGATTTCCGATATCTGT 59347 30 100.0 37 .............................. TTATAACGAAGAGATGGCAGATATGCATCTTTGTCTC 59414 30 100.0 35 .............................. GTAAGAAACTCAATTTCAATTGGAACGGCAAAACA 59479 30 100.0 38 .............................. TGAATGGCCGTCACCCCTTCTTGGAAATAGAACGAAAT 59547 30 100.0 39 .............................. CCCACCGCCCCCTTGAGTCTCTGATGTCCCTTTGCTAGA 59616 30 100.0 34 .............................. GTCTATCGTCGCCATTGAACGTGCAAAGGCAACT 59680 30 100.0 36 .............................. ATGCTTGAAGGTTACTAAGGCTCGGTTGCGCCCATG 59746 30 100.0 39 .............................. TAGGGTGGGACCCACGGCTGCTGCGCAGCCCCCACCCTA 59815 30 100.0 38 .............................. ATGTTGTTTCTACTCTCCGCGAATCTCTCTCTGCTACA 59883 30 100.0 34 .............................. GAGACAAAAGGTCAACATTTCCATTGTAAGAAGC 59947 30 100.0 39 .............................. GCTTTTTGTGCACCAGCTTGTACACTAGTTTTTACTTTA 60016 30 100.0 36 .............................. AGGCTCTGGAGGGCGAACTGGGCTGCAAGCTACTGA 60082 30 100.0 37 .............................. GATAGAGAAGCAGATAGAATACTATAAAGATGTGATA 60149 30 100.0 34 .............................. AGAGCTATTCCTGCGTGGATATGCAGTATAAGGA 60213 30 100.0 36 .............................. GAAAAAGGATTTTGAGTCAAAGTACAGCGAGGATGA 60279 30 100.0 34 .............................. GGCTTATTTGTCGCCTAGCGGAATTTAACCCCCT 60343 30 100.0 38 .............................. AAGAATGATGCAAGTAAAACTCAGGCAAAGCTGAGAGT 60411 30 100.0 37 .............................. TAGTAAAATATGGATATGAATATAAAGGCATATCCCG 60478 30 100.0 34 .............................. AGGCACGCCGCAAGCAGTATATCCTCGGCATCAT 60542 30 100.0 34 .............................. GTTATGATGAAGAGGATTTCGCTACTGATGGCGC 60606 30 100.0 34 .............................. AAAAGAACGCAGTTATAAATCTCGCTATTGAATA 60670 30 100.0 35 .............................. TTCAGTACCGCTACGCATGGCGGAACTACGCTCCG 60735 30 100.0 36 .............................. AAGTGTTCCTTGATTTTTTTCCAGAGTGCGCAGTTG 60801 30 100.0 37 .............................. GCGGTTATCTCTGCCTTGGCAGTAATGAGGAGTTGCA 60868 30 96.7 34 .............T................ TAGAATTATGGCAGTAAATCAAAAAGCAATCGGG 60932 30 100.0 35 .............................. GCGCATGCTCATGACCACCGTGGGCGCAGCATACA 60997 30 100.0 36 .............................. AGTGGAAGAACTATCTCACCAAGAAGGAGGCATCTG 61063 30 100.0 35 .............................. GAGAAGGGATTGATAAATTCACAGGAGAATGCTAT 61128 30 100.0 37 .............................. TTTCAGCCATCATTGATGAAGAGGTGAAAGCTGTAGA 61195 30 100.0 34 .............................. CAATTTTCAGCACCTCGTGTGACAATCACGAACC 61259 30 100.0 34 .............................. ATTTGGTCTAGCATATCATATACAATAGTAATAA 61323 30 96.7 34 ............................T. TTTTTTCTAGGTTTTAAAAAGAAAAAGGCTGGAA 61387 30 100.0 37 .............................. AGTACAACATCAAGGATGAGTGCATCAATCCGCACGT 61454 30 100.0 35 .............................. ATCATCTTTGCGCCTTCGATTGGTATCTCTTGATC 61519 30 100.0 36 .............................. GAAATATAGAGAGAAAAGCGGGCGTGCGTATATCGC 61585 30 100.0 39 .............................. ATAGACAATATGTATTGAGTTAATTCCGAACAAAGTTCT 61654 29 80.0 0 AA..T...C................-..T. | ========== ====== ====== ====== ============================== ======================================= ================== 40 30 99.3 36 GTTCAAATTGTACCTTTATGGAATTGAAAT # Left flank : CCTTTTAAAATGTATTGGTGATATGTATGTGATTATAGTTTATGATGTTGGTGAGAAGCGAGTAGGCAAAATGTTGAAGCTTTGCCGCCAATATTTGTGTTGGATTCAGAACTCAGTTTTGGAGGGAGAATTATCTGAAGCTAAACTTCGGGAATTGCAAATGAAGATGAAAGCTATCATTGATGAATCCGAGGATAGTGTCATTGTTTTCACCAATAAAATGGGGTATAATATGAACAAACAGATTCTTGGAAAAGAAAGAATGTCTACCGATAATTTCTTATAAAGAGTTGTCGATGTGGTTCTAATTTTCCGTTTCTAGGTTCGGAAAAACCTCCGAAAGTGTTCTTTGACTTATTGAAACCTCCATAAATAGGCAGGTTGTCGTAAGGCCGCAGAAAAAATATCTTTAGGCATCGACATTTTTTCTGAAGATTTTTTGTATCTTTGCACCCGCAAACCTATTGATTCTTCGAGCATCTATGTCTAAGGATTAACGG # Right flank : TCAGAAGTACTGATAGCTTTAGTATTATACCGCAATCTCTAGTTATAAGTGTTCAGAATGTGTCTCCTCCTGCCACAGCATTCGACTCCTTCAGCTATCGCATTCGACTCCTTCAGCTAATGCATTCGACTCCTTCAGCTAATGCAGCCGTCTCCTTCTGCCAACTCAGCCGTCTCCTTCACCTAATGCAGTCGACTCATTCAGCTAACTCAGTCGTCTCCTTCAGCCACCGCATTCGACTCCTCCAGCTATCGCATTCGTCTCCTCCGCTCACCGCATTCGTCTCCTTCAGCCACTGCATTCGACTCCTTCAGCTAATGCAGCCGTCTCCTTCAGCCAACTCAGCCGTCTCCTTCAGCCACCGCAGCCGTATGTGTCAACTCAATGAAGTAGATGAACTCGTGAAATGAAGTGGATGAACTCGTGAAATGAAGTGGATGAGTTCGCATAATGAAGTTCATGATTTCTGCATAATAATTAATACATGCGAATGGTAAAGC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAATTGTACCTTTATGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //