Array 1 52280-53750 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABKKF010000010.1 Prevotella sp. PMUR PMUR_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 52280 35 100.0 36 ................................... CCATGATTTCGTGACCGAACTGCGAGCTGATTTTAA 52351 35 100.0 32 ................................... TTTTTTTCATTTTAACTAGTTGTTTGATTACA 52418 35 100.0 33 ................................... AATTTTTTTTCATTTTTTTTTATTTTTTTTGTT 52486 35 100.0 31 ................................... GTTTTTTTAATTAAATATAATAGTATTTTTT 52552 35 100.0 34 ................................... GGCTATAATTGCAAAAAACTTCTTCATATATGTA 52621 35 100.0 34 ................................... GAATTTCTTAAATTCCACTTTTTTCATAAATACA 52690 35 100.0 33 ................................... GTCTTCTTCATAATAAGTTTGTATTTTGTGTTT 52758 35 100.0 30 ................................... ATAAAATTTTTTTTTTTTGATTTAATAAAA 52823 35 100.0 34 ................................... ATTTTTCTTTTTCATTTTCTATTTTTTTTTTTAA 52892 35 100.0 35 ................................... GGGAATTTGTCGGCGACTTTGCCGATAGTCCTTGT 52962 35 100.0 34 ................................... TTTTTCTGTCATATAGGCATTTTTTTATTTTGAT 53031 35 100.0 32 ................................... ACGAACCTGATTTGGTTCTTGATGCTCCGCAT 53098 35 100.0 34 ................................... CAACGACGAGAGCAACAACAAAAATAATATAAAT 53167 35 100.0 34 ................................... CTTTTCTCATAATTGTTTTTGTTAAATTGTTTTA 53236 35 100.0 33 ................................... AGCAAGAATCAGAATGATAGTATACATGATTAA 53304 35 100.0 33 ................................... TTTTTTTCTAATTGAGAGTTAAACATATTTTGT 53372 35 100.0 33 ................................... AAACACACACAAATAAATAACAATAATTAGTTA 53440 35 100.0 31 ................................... GTAAAACGATCATTGTCAAAGCAATGATTAA 53506 35 100.0 34 ................................... ATTTATTCATAATTCTTAGTAATTTTAATTCGTT 53575 35 100.0 36 ................................... TAAAAATAATAGCTTTTTTCATAATTTAGTATTTAA 53646 35 100.0 35 ................................... GTTAAGGTTTGATGTAGTCTAGTGTTTCAGCGAAG 53716 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ==================================== ================== 22 35 100.0 33 GATTCCTATGTCTACTGCGTTAGCGGTACTGAGAC # Left flank : ATATTTTATTGCCAATATGTTTCAATGGAAAATTACTATATCCCACAAAACATTTGCGAAAATTATAATTTTATGTAATAGACAGATAATCAGATATATAACATTTTCTTGTCTGACACGTGCCTTAGTGTAAAGGTTCGCAAACCTTTTGAGAACTGTTCTATGGCGATACATTTGCGAAAATATTAAGTAACGGAAATGCTATTTCTTTGATTTTCAGGGTATTATATATGGATAAAGACACCGCATATTCGCAAATCGGAAATTCAGGGCTTTACATTAAAACATTTGCGTGGTGTTATATATGTCTAATATGTTGATTATGAGTGGGGTAAATGTTTTTTAACTTTAAATTGTTTGGATATGTAAGTTTTTATATTTACTTTTGCGAAAGTTTTAAAACAAGGGGAATCAAAGCATTGATTTTAAAAGGGAATCTGGTGAATACAACAAAGAAAATATGACAATATGTTAATATGTAACTTATTGATTTTCTTGTT # Right flank : CTGTTCATAAAATAATGTTTAGATGATTTGATAAAGGATTCCTATGTCCACTTACATTAACCGCCATGGATGTAAATGATAAACAGGAAATGTTAAAAGTGTATTTGGGCTAAAAACAGAGTGTATTTAGGCTACATACACTCTGTTTTTAGGCTACATACACAGTGTATGTAGGCCAAATACACTTTTAACAGTTGGTATCCGGTCGTTCTTTCCTGTCTGATATTGACTAAAATGTAGGGTATCCGATTCCATCAATGAATGGCGTTTGGAATGCACGAAACCACAGTGTCAATATTTCTGTTTCTTTTATAGAAAAGACTGAATACTTTCAGTCCTGCTGATTTGCTGATAAAAATCAAAATAATCACTGCTTTTAAAATAAAAAACATTATCTTTGTTGATGAATGTTTTAGGCCGATGTTTAATTAATGAATAATACGTATATGGAGAGTTTATTTGACAGATTATGTAAGACCGGAACATTGCTGCAAGCATGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCCTATGTCTACTGCGTTAGCGGTACTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 54627-55210 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABKKF010000006.1 Prevotella sp. PMUR PMUR_6, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 54627 47 100.0 30 ............................................... ACACCGGGGATGGTCATTCCCACACTTTCC 54704 47 100.0 29 ............................................... GCCAGGTGATGACTACTGTTAATATTGAT 54780 47 100.0 30 ............................................... TCCTTACGGTCATAACATTATAAATGCTTT 54857 47 100.0 29 ............................................... CTCCAACCGTTCTAATAACCGTAACAATC 54933 47 100.0 30 ............................................... TCGCCACTGCGGCGTTATTTCTCTCGCCAC 55010 47 100.0 30 ............................................... ATGTCACTTCAAGTATCGTTCTACCCAAAA 55087 47 100.0 30 ............................................... ACGACAGCACAAGCGTCATCGAGCGCGATG 55164 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 8 47 100.0 30 GATGTTTATTACTATACAAAGATACGAATTTTAAAGCAAATCACAAC # Left flank : TATTGGTATTTTTTGATTTACCGACCGAGACAAAGAAAGACAAAAAAGAGTATACTTTGTTCCGTAAGAATCTGCAGCGTGACGGTTTCACTATGTTTCAAATGTCTATATATGTTCGTCATTGCGCTAGTATGGAAAATGCAGAAGTACATATTAAACGCGTCAAATCCTTCCTACCTCAATATGGTCATGTTGCAATAATTTGTATTACAGACAAACAATTTGGTAACATAAAAGTATTTTATGGTTCAAAACATCTTGCCACAAATGCACCAGGACAGCAACTTGAACTTTTCTAATCTTTTAACCTTACAAAATATTAATTAACGGCAGTTTAGATTAATTCCTATCTATCTATTTATATATCAATATATGCTATTAATGGAATCTTTATATTAATGGGATTTTGTTATATAACAAAATCCCATTAATAAGACAACATTTTTTCTTTTCTATTTGTGTCTGTATATCTCTGTCTTTCACCACTTTACTTCACTTGT # Right flank : CGACTTTTAAACATGCCTATTCTTCCAAACAATGTTTATTACTATACAACCATGGTATGTGGAAGTATTTGATTGCCTATTATATGCAGTTAATACGGTAGAAAAGTGAACTAGAATTTACTTATAGGTCTAAGGATAGTGAAGATTTAACGATTTTAACCTGCTTTCACGCTAAATATGAGGTTTGGATGACAAAATGAGGAAAGAGAAATAAGAGAAGACAGTCAAAAAAGAAAATAAAATGGGATGCGGTTGAAACGATACCCATTCCCATATATGGATATAAAGGCAACTTCGCTTTATAGTCTGTATATTTAAGAAGTATAAAGTAAAGTGGATTGCATGGAATGGGGTCGGTTTAAACCACACCATCTGTTTGTATCGACCTAAATTGATTTCTTGACTTAATGCTATATATAAGAGATGAATAAAGTCAAGTAGTACAAAGATGGTGAGTTGCCAAGGTAATAGCTCTTTTCTTCTTTACATAAGCAAAGCTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGTTTATTACTATACAAAGATACGAATTTTAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.47%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 13970-14324 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABKKF010000014.1 Prevotella sp. PMUR PMUR_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 13970 36 100.0 29 .................................... GTGATAGTCTGCTATCAGTTCGCCTCCCT 14035 36 100.0 27 .................................... GGGTGAACCTATGGTGGTATGATTTTT 14098 36 100.0 27 .................................... TTGATGATATGACGCATGATGATATAA 14161 36 100.0 29 .................................... TTTGCCTTGTCGAGCTTCTTTCGCCCAGA 14226 36 100.0 27 .................................... ACAGTATCGTTTCTCGTTATATACAGT 14289 36 97.2 0 ..........A......................... | ========== ====== ====== ====== ==================================== ============================= ================== 6 36 99.5 28 GGCTATAAGCCTTATATAATTTCTACTATTGTAGAT # Left flank : GCGAAAATCAGTGAAAGAGTATCCAATGTTTATGTTATGATATGTTAGTTATAAGTTATGACATAAGCGATGATCGGCTCCGCGCAAAATTCTCAAAGATGCTGACGAAATACGGTGCTGTCAGACTTCAGTATTCTGTATACGAGGTAAACAATACTGATCGGGTTATCAACAATCTTGTTGTTAAGATAGAAGAGACTTTTGCCAAGAAGTTTGACGGTGGTGACAGCGTCATTATTTTCGATGTGGCAGGTGTGAAATTAAGAAAATATGGTAATGCTATTCATCGTGATAAAGATATCGTATATTTTTAGTTTATTATAATAATTGCAGATGTCGGTCTCTACAAATATGTGGATTGTTCTTATATGTATTGATAAACAGACATTTACGTATAAACAGATATTGTGATTTTATAGTACCCCTTATAAATTTATTTTTTGTTTTTTATTTTAAGTCTTTGGTATTTAAAGAAGTAATTTGTACTTTTGCAAAATAAA # Right flank : TTTTCTTTGACATATTCACTGAATCTTGAGTCTATAATCTTATATATTGCAGACATGTCTAAAGTGCATCTTGTTCGGTTTGTGATATCTACGTTGCCGTTCTTTACATATATTGCTTTGTTTTTATGAAAAACCGAAAAAAAAGTGTTAACTTTGCATTTCTTCATGTAAAAACCATAAAACATAAATGAAAAGGCTGATAGTCATAATAATGATGATTCTCGTTGCGGCAACGGATATAAATGCCGTGTTGAAAGAAAAGAATCTTGAGAGTACGCTTTCTGTGCTGCGTATTGAGCTGACAAACTACAGGCGTGAGCTTTCTTCGCAATCCATGCAGAATAAACATAAAGGAGAGGTCGTGCACCGTCAGTTGATATCCACGTTACAGAAAAGCAACCAGAACGCCCTGATGCTTTATTCCCAGAATCCCGACTATGTGTTTGACATGGCATACGCCTGTCATGAAGCTACGGAACAGTATCTGAACTTCCAGAAAT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTATAAGCCTTATATAATTTCTACTATTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //