Array 1 483832-485562 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENQX010000002.1 Clostridium perfringens strain CHD16270R CHD16270R_seq2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 483832 30 100.0 35 .............................. GAATATAAGTGGTATATAGCTCCTTTTTCTCCACC 483897 30 100.0 35 .............................. GACTTAACAACAGATTCATTATCAGCCTTAGGATT 483962 30 100.0 36 .............................. AATACATGTTCGTAACCCATTTCTAGCGGACAGTTT 484028 30 100.0 36 .............................. AAATATGGATGCTTCTTTTGAAATTGATTTAAATAA 484094 30 100.0 36 .............................. ATAAAGATGAATTTTATATGCTTAAATTTATAAATT 484160 30 100.0 34 .............................. GTATCCAAGATTACAGCTTGAAAAAATTGAGTTA 484224 30 100.0 36 .............................. TCTTATTTCCTTTAGTAGCTATCTCAAATCCTTCTT 484290 30 100.0 35 .............................. GATCTTAGAAGAGATGTTGAGTTTTTAATTTCTTC 484355 30 100.0 37 .............................. TCCTTATTTCTAAGTTCTTCTAGTTTCTTGCAATATC 484422 30 100.0 36 .............................. TGAATACTTAGACCAGGAAGATGATTTTGAAGATGA 484488 30 100.0 35 .............................. GTAGGATTAAGGTTTGATATTGATTTGCCTAATAC 484553 30 100.0 35 .............................. TAAATAACAGAACTGTTTTTACCACTTTGTCCAAA 484618 30 100.0 35 .............................. AATATAGTGTTTACAATTCTTACGTAACTTTCAAC 484683 30 100.0 35 .............................. GCACCATCTACTGGCTTAGAAATTGGAGGATTATC 484748 30 100.0 35 .............................. TCGAATAAATCTGGGTTACTTTTTTGTATCGCAGA 484813 30 100.0 35 .............................. CGTGAAACATATACATGTTAGAGCCTTTGGTTTCG 484878 30 100.0 35 .............................. TTTTATATAATTTAAATCAATTACATTTATTATTT 484943 30 100.0 36 .............................. GAATTAGTTTTTGTTAATACATACGACAATGAATAC 485009 30 100.0 35 .............................. GCACCATCTACTGGCTTAGAAATTGGAGGATTATC 485074 30 100.0 36 .............................. AATGTAAATTCTTTTTCAACACTCTTATTCAATCCA 485140 30 100.0 36 .............................. TAGTCATTTATCTTAGGGCTATCAATGAAGCGAGGG 485206 30 100.0 36 .............................. CAGATTAAAAGCAAATGAATTTGGATATGAAGAGTT 485272 30 100.0 35 .............................. AAAATAACTATCATGGTTAAAGATATGAAAAAGGC 485337 30 100.0 34 .............................. ATATAAAGAGAGTTTAAAAAAAGAATATGATAAT 485401 30 100.0 36 .............................. AAGATAGTTGGGTAACTGTAACTGATACTGTAAATG 485467 30 100.0 36 .............................. GACCATGCACCTATTATTCTTTCACCTATTCTAAAA 485533 30 96.7 0 .................G............ | ========== ====== ====== ====== ============================== ===================================== ================== 27 30 99.9 35 ATTGAACCTTAACATGATATGTATTTAAAT # Left flank : GTAAGATATGAAAAGTAAAATGAATTATAATTATGCTTTTGTATTTTATGATGTAAATGAAAAGAGGGTAAATAGGGTGTTTAAAGTTTGTAAGAAGTATTTATCTCATTTTCAAAAATCAGTTTTCAGGGGAGAAATAACCCCTGCTAATCTTATAAACTTAAGAAAGGATTTAAATAAAGTAATAGAAAAAGATGAAGACTTCATATGTATTGTTAAATTATTAAACGGAAATGTATTTGGAGAAGAAGTGCTAGGAATTCAAGAAGTAATTAACGGAGAAACACTGATACTTTAATAATTAATTCAAAATAACATATAATTTTACCAGTGATTTAAGTGGAAAAAAGTTTGCGAAACCCTTGAAATAACTAAGTTTTAGGCTGATTTTCGATACCCTCTTTAATTCTTAATAAAACACTGGTAAAATTATAGTATAAGTATTGAAATAATTAGATTAAGATATATTTATTAAATTTAAAAATGGCTATTTTACAAGG # Right flank : TATTAATACTGAATTCACTAAAAATTAAGTAACTAATTTATATTGTTTTTCAGTATAATATAATTACTTAATGTCTTTCTATATAAAGTTTTATAATTAAGTAGGGGTATAATATGAAAAAACTAGCTTTTATTATAAAAAATATTTTGAAATTCTGGTGGTGGCAAGATATAGAAAAGTCTAATATTTTTATAAGGGTTATGAATATTGGAATGGCTTTATTTTTAAGCTTTTGTCTCTTAGCATGGATGTATGGAGAAAGCTTTAATATTATATTAAGATCATTTATAAGTATTTATGGAGTTCTATGTTTCATGTCTTTTTGGCCAGTTTCATATTTATTTGATGAAAAGGATAAAGTAAAAGGAAGTACATTTTACATATTTCAAAATATTTCAGTATTTTTCTCTATTATTATATTAGTTGTTTATATACTAAAGAATTATGATAGAGTTAAAAGCTATTAATATAATTAAAAGTAATATAATTTAAAAAATATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCTTAACATGATATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-85.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //