Array 1 8558-6407 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJJP01000043.1 Campylobacter lanienae strain P147 ERR473904.12448_4_52.43, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 8557 37 100.0 33 ..................................... CGCAAAAGCTAGAGAGCGAATATCTGATTTTGC 8487 37 100.0 36 ..................................... GAAAAATTCTAAGGTGCTAAGGTCAGCATTCATCAG 8414 37 100.0 36 ..................................... CACTTTAGGCGTTATTAGTATCGCGGAAAGGCTTAT 8341 37 100.0 35 ..................................... GCTAGAACAAAATAAGACTAAAATTAGCAAAGAGC 8269 37 100.0 35 ..................................... TATATCGCCCCTTGCCATTTCGCCTAATCTATTGT 8197 37 100.0 36 ..................................... TTTAATGATATTTCTAAATCTCTATAAAAATAATTA 8124 37 100.0 37 ..................................... ATGGGGTAAGTGTGAGTTATCAAAGCTCACCATATAG 8050 37 100.0 36 ..................................... CACTAATTCCTAAATCAGTATAAACGCTTTGTAGAG 7977 37 100.0 38 ..................................... TACTTTACTTCAAGCAGCAATTAGGGGAGCCACTGGAC 7902 37 100.0 36 ..................................... TTTATTATGCTGTTAGTAGTATTAACGCGGTTACCA 7829 37 100.0 35 ..................................... CAAAAAGCCGTAAGCGATTTTACACAAGCGAGAAG 7757 37 100.0 37 ..................................... ATTTAGTTAATAGGGCATCTTTTGATATATCAATCAT 7683 37 100.0 37 ..................................... GAAAAAATAAACGGCGGTAAAGATTATGTTTATTATT 7609 37 100.0 37 ..................................... AGAAAAAAGGCGAGAATTAGAGCTTAAAACACTTCAC 7535 37 100.0 37 ..................................... TTCTGTCATCATTTCGCCTTAAATAAAATTAGTTCAC 7461 37 100.0 35 ..................................... CTAAGAGCCGGATTTTTTGAAGTTGCTAAAATAGC 7389 37 100.0 37 ..................................... CTATATTTAAAATATTCATTAATCATTTAGTATCCCT 7315 37 100.0 36 ..................................... GCCACTCGCCATCTTGTTCTAATGTGAGATATTTTA 7242 37 100.0 36 ..................................... TAAAAACATTAAAGCAAGAAAACACGCAATTAAAGG 7169 37 100.0 37 ..................................... ATTATGATACCGAAGCTGAAAGAATTAGGCAATATCT 7095 37 100.0 35 ..................................... TAATTGATACCAGTTTAAGCCTTCATTTATGTTAA 7023 37 100.0 35 ..................................... GTTCTATCAAAGGGATTATTATTAAAATTATCTTT 6951 37 100.0 34 ..................................... CTTAAATTAACCTTAAAAATATTAGTCACTATTA 6880 37 100.0 36 ..................................... AGCTAAAAAAGATTTTAGAGTTTTCTGCCCTTATAG 6807 37 100.0 36 ..................................... GTTAAATAACACAGCCTTAAAAAGTGGGCTTAAGGA 6734 37 100.0 36 ..................................... TTCAGTATTTACCCATTTTCTGAATTCTTTTGCTGT 6661 37 100.0 36 ..................................... AAAGGCATAAGATGGATAGAGTAGTAGTCCAGCCAA 6588 37 100.0 35 ..................................... AAACTAGCAAGGCAATATCAAGGGATAAGCAATCG 6516 37 100.0 36 ..................................... TTCAGACGCTCAACCAACATTTACGGCTAATAACAT 6443 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 30 37 100.0 36 GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC # Left flank : ATTTATAAATCTAAAAATTTTTTTTAATTTTTGATATTTTTAAATAATTCTATTATTTATAGCTTGAGTTAATATTTCCATTTTACTCTCCTAAAAATTGTTTAAAAACTTCTCTACATTATCACGCTCAAAATATTTATAATATTGTGTAGAGATACGCATTAAAATCATCTCTCTCTTAAACTTATCAGCTCGAGCTCATCACTTTGATAAATTTTATATAACGAAGCATTTACTAAATCTATATCATCAAAATTAGCCGCTATACCTAATTCTGGGGCAATCTCATCATAAAATAGCTCTATTTGCTCCCCTTTTTTGTAAGCACAATTCTAAAAGCATTTATAAAGTCTTGAGTGTTTGTAAAATTTTTGTATTTG # Right flank : TCCGCACAAAATGCCCTATTTTAGGGATTTTGCGCTTAGTTAATTGTAAAAATTTTTCCACTTAGAAAAAAATCGCAAAAAATGGCGAATTTGTGGAAAAATATGTTATAATTCAAGCGCAAATTATACCATAATCTAGCTTATAGCGTTTGAAATCACCACAAGGTGTTTTCATATCGGGGCAACTGCCTTTGGCACCCCCGGTTATTCTCTATCATCGCAATAATTTTTAAACTCACATTGCGCGCAAGCTGTAATGCTAGCTGAACTTTGTGGGAAATATCCTTTTTCTAATAGATCTTGAATTTGTGTTAGTGTTTTATCAAAATAAGCTAAATCCTCTTTATAAATTTCAAAGATTTTAAATTTTAGATTATTTGAGTAGCATAAAATCACCCTATGAAAAGGCTTTTTAAAGCGCTTACTAGCAAGTTTAGAATATGCTATAAGCTGCATTTTTGCGCCCTTGCTTAAAATTGGCTTTGATTGGTTTTTAAACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //