Array 1 59365-60556 **** Predicted by CRISPRDetect 2.4 *** >NZ_HG964460.1 Mycolicibacterium austroafricanum strain DSM 44191, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 59365 29 100.0 33 ............................. GCCGCCCGAGTGTCGTCACGGCGTGCAATGATG 59427 29 100.0 32 ............................. CATGGGTTGTCGGTTTTCTGACAATGGCCGGT 59488 29 100.0 33 ............................. CGGAGCGGGTGCCGCCCGCGTTCGAGGACATCA 59550 29 96.6 32 ............................T AGTTCATCTGCCCGACCGACCAGCTCGCTCTT 59611 29 100.0 32 ............................. CACTGTCAGTGCTGGCCGCGCCTCGCCCGCAG 59672 29 96.6 32 ............................T ACCGCCATCAAATGTTCCAGCGGCTCGCCGTC 59733 29 100.0 33 ............................. GGGAGCAGCCCGCGACTGGTCAGCATGGCCTTG 59795 29 100.0 33 ............................. CTTGGAGCATGTCTGCGGGGCGGATAGCCTCCT 59857 29 100.0 32 ............................. CCGAATTCGCGCATTTGGACTGCCGATCTTCT 59918 29 100.0 32 ............................. GGTCAGCGACCCGATGTGAAGGCACTGTATGA 59979 29 96.6 32 ............................T GAGGTGGGCGCGTGGCTCGATGATCAGCTTTC 60040 29 100.0 32 ............................. GGACACATGACCAAGACGACAAGGAGCACAAC 60101 29 100.0 32 ............................. TCGCACCCGCGCTGCGTGATCTCGGCGCAAAG 60162 29 100.0 33 ............................. ATACCGATGCTGGCAGTCGTGCGCAACGATGGA 60224 29 100.0 33 ............................. GAAATGTAGACCAAGGATTTCGGGTCGCACGCG 60286 29 100.0 33 ............................. GACCGTGGCCGCCTCGTCTTCGGAACCGCTTCG 60348 29 100.0 30 ............................. GCATCGCGCGGAATCAGCGCTCGGAGATCG 60407 29 86.2 32 CGC.T........................ ACCGAGACCGCCGCGGGCACCGACGCGATGCG 60468 29 100.0 32 ............................. GACACATGCGGACCGTGCGAAATGTGGCTCCG 60529 28 82.8 0 ....-..................C.CG.T | ========== ====== ====== ====== ============================= ================================= ================== 20 29 97.9 32 GTTTCCCCCGCGTAGGCGGGGATTGATCC # Left flank : GCCAGAACACCCGCATCCGCGTCCCCGGCCGCGATAAGCCCATCAACCGCACCACGACCCCCCGCGGCGAATCCCAGATCCAGGGCTGGTGGGTCCGCAAAGCCATCGCGGCTGGGCTCTCGCCGGTCGAGGACCCGATCCTCGACGAGCCGGGGGAGCGGACTCTGCGCAAGCACGGAGACGACCCCGGAAAGGCCCGCATCACGCATGTGCGGCTGACAGGCAAGGCGATGATCACCGACCCGTCCGCGTATGCCGAAGCGGCGCACGTCGGAATCGGATCGGGACGCTCCTATGGTTGCGGTCTGTTGCTGACCCGCTGACCGGTGGATGCGCAGCCGTTTGACAACTGAACAGTGAACCACCAACTCCGCCACGGTCAGCATGGAACCGTGGCGGAGATGGATCCCCTGATGCGTGGCGCCTCCTTTCTCAGGAGAATCACAGCATTTCAGGTAACAGAATGATAACGACGACAGAACTGATGCTGGTCAGCTTCT # Right flank : TGCGGCCTTTTACCGGCACCGCGGTGCCGGTAAAGCGGGCCTGCACGCGCCGTGCGCCGTCGTGTGCCGGTGTCGGCGGCGATGCTGGCTACCGTGGCCAAGACACCGCGCATACATCTGCCTACCGCCTCTGCCCGGATCGGAATCCTCACACTGGAGCGGGCACGGATCGCCGTCGAAGGCGGGACCGTCGTCGCGCACACCGGTGATGTGGTGTTGGCACTGCCGACGCACACTCTCACCGCGCTGTTTCTTGGGCCGGGCACGACCCTGACCCACCGCGCAGCAGCGGATCTCGCCGATGCCGGCGTCACCGTGGTGTGGACCGGCTCCGGTGCGGTCCGTGCCTACAGCACAGTGACGCCGCTTGCGGTGCGCGCCCAGTTGCTCCATCGGCAGGTCAGTGCGTGGGCCGACCGCCAGCAGCGACTGACGGTGGCCCGGAGGCTGTATGCCCTGCGGTTTCCCGATGATGCCGCGGCGCAGCTGCTCACGATGGA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCCCGCGTAGGCGGGGATTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.60,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 63606-64357 **** Predicted by CRISPRDetect 2.4 *** >NZ_HG964460.1 Mycolicibacterium austroafricanum strain DSM 44191, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 63606 26 85.2 32 .A.......-..G...A.......... CCACAGCAGTTCCTCTACCACCTCGGGTCGGC T [63612] 63665 27 96.3 33 ...G....................... CTGACCGACGGCGCGACGGCTTTGGCTGCTGCC 63725 27 100.0 33 ........................... CTTCCCAGCGCGTGTCGACCGCGTGGAGGGTGT C [63729] 63786 27 96.3 33 ...........C............... TGTCGAGACTCCTAGTACGGTCCCGATTTCCAG 63846 27 100.0 33 ........................... CTGACCCGCGAGCACTTCATCACTGACGAGGTT T [63851] 63907 27 100.0 34 ........................... CGCGTTGGAAACGTATCTGCACCGGTTGACCGCT C [63911] 63969 27 96.3 32 A.......................... CGTCACCGACGGCGAGCGCTCCGGCAACAGCA C [63972] 64029 27 100.0 33 ........................... CTCGGATTCGGACATTGGACGGGCGGGGCTGAA C [64033] 64090 27 96.3 33 .............A............. TGCGCGACACCGCGCTGACGCTGAGCCCGACCT 64150 27 100.0 33 ........................... CGCGCCCGGCCTCACCGAGGCGGGTACGCCGAT 64210 27 96.3 33 .................A......... CACAGACGGTCGGCACCTGCGGCTGGGAGTCGA 64270 27 92.6 33 C......................A... CGGCCTGGTCGCCAAAGCTGACACCAGCGGCAG A [64281] 64331 27 70.4 0 ...............T.TCA..G.CCA | ========== ====== ====== ====== =========================== ================================== ================== 13 27 94.6 33 GTTTCCCCGCGTAGGCGGGGATTGATC # Left flank : GGCCTGCGTAACCTGCCGTGCCACTCGTTCTGGGCCAACGCCGCCTGGCTGGAAATCGTCCTTGCCGCCGCCGACCTGGTCACCTGGACACGACTGATCGGCTTCCGCACCGAGACCGGCCTGGCCCGCGCCGAAATCACCACCTTCCGCTACCGGGTCCTGCACGTGGCGGCCCGCATCACCCGCAGCGCCCGACAACTACGGCTACGCATCGATGCCACCTGGCGATGGGCGCACGCGATCGCCACCGCCTGGCAGACCATCCGCACCGCCTTCAGATAGAACTCCGGCCCACCCGACCCACCGACCACGAAAGACCAGGCCTTCGGGAAAGCCCGCCCCACCCGGCGACACGGGACGATCAACCACTCCACTACGCCGAAACCGCCACCCCGCAACACAATTCAGCAGCCGAACCGCACCCACATCAACTTCGATGCAAAATCCGGGCTAGGCAACAAAACGATAACGTCTATTGTGAAGCTGCAGAACATGTTTCG # Right flank : AAGTGGAAGTCCCCGCTGGTGGCCGGATAAAAGTCCCCACCCCGTGTGGTGATTTCTAGTTTTGTGGGGCGGCCTCCTTGCGGTGGTGGGCGTCTTTCATCCGGTAGGAGTCGCCGTCGGTGATGACGACGGTGGCGTGGTGCAGGAGCCGGTCGAGGATGCTGACCGCTGTGGTGTGCTCGGGCAGGAATCGGCCCCATTCTTGGAATGGCCAGTGTGATCCGATGGCCAGGGATCGGCGTTCGTAGGCGCCGGCGACGAGCCGGAATAATAGTTGCGTGGCGGTGTCATCGAGTGGTGCGAAGCCCAGTTCGTCGAGGATGATCAGATCGACCCGCAGCAGGGATTCGATGATCTTGCCGACAGTGTTATCGGCCAGGCCGCGGTAGAGGGTTTCCACAAGATCGGCGGCGGTGAAGTAGCGGACCTTGTGCCCGGCGTGGATGGCGGCGACGCCCAGCCCGATCAGGGTGTGCGACTTGCCTGTGCCGGCGGGTCCG # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCCGCGTAGGCGGGGATTGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.60,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [8-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 66875-68029 **** Predicted by CRISPRDetect 2.4 *** >NZ_HG964460.1 Mycolicibacterium austroafricanum strain DSM 44191, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 66875 28 85.7 32 A.GG..A..................... GAAACCGTCCTCACCAACGCCTACCAAGGCCA GA,A [66880,66883] 66938 28 100.0 33 ............................ GTTCCGCAAATGGCTGCGGAGCGCGGCGCGTCC 66999 28 100.0 32 ............................ AACAGCGCGCAGCACTTCTCAGCGGTCCACGA 67059 28 96.4 32 ...............T............ GACTCCCTCGAACTGCCGCCGAAGGTCTCCGG 67119 27 92.9 32 .A.......-.................. GTCCCGGGCCCACCCACACCCGGCCTCCCGCC 67178 28 96.4 33 .............T.............. CAGCAACCGCGACGGGCCAAGCAGCACGCCGAG 67239 28 100.0 32 ............................ CAGCGTCTGCCCGCACCGCAGCAGTTCGGCAG 67299 28 100.0 33 ............................ AGCGCTGTGATTTACGTGGATGCCCCGCTGCCG 67360 28 89.3 31 T..CT....................... TCTGCGAGATCCTTCACCGCGAGCGCGCCCA 67419 28 85.7 32 .G..T.....A.C............... GTGGCCGCTGCCGCCGCGCGTCTCGAAGCAGG 67479 28 100.0 34 ............................ GGAGCGGGTGATTGCTGTGCACGTGACGACGTTG 67541 28 89.3 32 T..C........C............... CGCGACCGTTCCGGCCCCGCCGCTGGCGCGAT 67601 28 100.0 33 ............................ ACCGCGTTACCGGTGCACCGCCGGACGAGATCG 67662 28 92.9 33 T..C........................ CAGCGGCTACGGCGGCTGAAATCGCAGGTACCA 67723 28 96.4 33 ...............T............ TGAAAGAAGAGGGAGAACCGCCGGGCTCGCGCG 67784 28 92.9 32 T..C........................ GTCACCGACGGCGAGCGCTCCGGCAACAGCAG 67844 28 92.9 33 T..C........................ AGCTTCGCCAACAAGTCGTCGCGCACCGACGCG A [67857] 67906 28 92.9 32 ....................G......T GACTGGTTCGGAGATGTGGTCATGTCGCTGTT 67966 28 89.3 8 ......................CT...T CAGGCCGA Deletion [68002] 68002 27 71.4 0 ...G..T.C.C.-C........C....T | G [68004] ========== ====== ====== ====== ============================ ================================== ================== 20 28 93.2 31 GTTTCCCCGCGTAGGCGGGGATTGATCC # Left flank : GGCGTCGACCCCGATGATGCTCATTGCGCCACAACACTTTCGCCTCGGCGACCAGTCGGCGGAAGTTGCGGGCAGACCCCTCGTATCCGGCGGCCCGGGCAATCGGCAGCATCCGCTTGGCCGACATCCGACCCTGGGACTTCGCGACACGTTCGGCGACCAGATCGGTCACCGCGTCGTAGTTGTGGGCTCGCTGCGCCCGTGGCGGTGCGTTATCGCCGGCTTCGAACTTCCTCACGATCCGTTTGACGGTCTTGGGGGTGGTGTGGCAGAGGTCGGCAGCACCTCGGTACGACCCGACTTGTTGGTAGGCGGAAATGATGTCCATGCGGTCCTTCGCAGACTTCAATGGAACTCCCCGGTGGTGGTGGCGTTTGGTTGGCACCTTCACCGTCACCATCGGGGCCCACAGTTCCTGATCGACACGACGAACACGGGGTGGGGACTTTTATCTGGCCACCAGCGGGGACCTCTACTTGGCCACCAGCGGGTACTTTTTC # Right flank : TATCGGCAACGCCGCGGTCCCGAATGGTCCTGAGCAGCCACTGTCACGTCCCTGACAACTTTGTGCTTCCGCTGTTGTCGGCGTGTCGGTCCGCGCGGGTAGGTGCGCGGGACCGGCGGCTGATGGACTCACCGCGCCCGGCCTACCCGAGGAGAAGCGATGTCTGTCACCACGTCACGAGCAGCTGCGCAGGCGGCGATGTTTCTGGAGGGCCGCAGTGCCGATGATCTCGGTTGGCCCGACCGCGACTGTGTGGCACGGCAGTTCGCCGCGGCGGTGCTGACCGGTCTCGGTCCCGAGCAGTGGGGCGCCGATCCGGTCACGTGGTGCATTGAGGTGCTGGAGCCGGCCATCGAGCGCCGCATTCCCGGTCCCCACGACGATCTACGTGCGTTGGGCTGGCCGCACACTCCGACAGTCGCGGCCAACCTCGTGCAGTGGCTCGTCGACGACGGAATCCTGGCCGAAAACGACGGATGAGCAGCGCCGTTGGATGAGTG # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCCGCGTAGGCGGGGATTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.60,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 121033-118618 **** Predicted by CRISPRDetect 2.4 *** >NZ_HG964454.1 Mycolicibacterium austroafricanum strain DSM 44191, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 121032 29 100.0 32 ............................. AAATAGCCGGGGGATCGAGTTTGATGCCGCGG 120971 29 100.0 34 ............................. AACGCCATGACCGACCCGCGAGCCCACGCCACCA 120908 29 100.0 32 ............................. GGGCCGGGCGATCGTGGCCGACGCGCTCTTCG 120847 29 100.0 32 ............................. CCACACGCGCGTGACTTCGACCACCGCTTCAT 120786 29 100.0 32 ............................. CAGATGCCTGCGTCGCCGAGGCGCTGTATGAG 120725 28 96.6 32 ........-.................... CAGATGCCTGCGTCGCCGAGGCGCTGTATGAG 120665 28 96.6 33 ........-.................... CAGCTGTGGCGCGAGTACCTGCGTGTCGTCGGG 120604 29 100.0 31 ............................. AGAACCGAATTCGTCGGTCTCGGTGTACACG 120544 29 100.0 34 ............................. GTCACCGTCGGCCAGTGCAGCCAGCGCCTGGGTG 120481 29 100.0 32 ............................. CGAAAGCGCGACGGTGCCCTCGATCTCGATGA 120420 29 96.6 32 ..............A.............. GCGGCGAGCTGCTGGCCTGGCTGATCCTCGGC 120359 29 96.6 32 ..............A.............. CAGTCGATTCCATACCCGTCATCGCGCTCGAA 120298 29 96.6 32 ..............A.............. CTGCGAGCTGCGCCTCCCGCCAGGCATGCTCC 120237 29 96.6 33 ..............A.............. GTGCTGCTCGACCTGGCGGGCCAGCGGCCGATC 120175 29 96.6 32 ..............A.............. TGCGGTGCGGGCAGCGGCGCTGGTGCTGATCG 120114 29 96.6 32 ..............A.............. TGCTACAGAAACGCAAGAGCGATCCCACTCAG 120053 29 96.6 32 ..............A.............. AGAGCCACCCGGAGTGCCACCCGCGGAGGGCT 119992 29 96.6 32 ..............A.............. CATGACCGACGGGCCGCGGGAGCTGGATCGTC 119931 29 96.6 33 ..............A.............. GGCGCAACGATCGCCAAGTGCGCCCACCCGCAG 119869 29 96.6 32 ..............A.............. GGGGATTGCGGCGCGGAGCACGATGGCCTCGA 119808 29 96.6 32 ..............A.............. TCCGCTCGTGGTCGCCATCGTCGCGTCGTTCA 119747 29 100.0 32 ............................. GGTCCCGATGGATGTGCGGACCCGGCGATGGC 119686 29 96.6 33 ............................A CCGAGTCGCGCAGCGACAGGAATGACGCCACCA C [119676] 119623 29 96.6 32 .................T........... CACGCGGCGGTCATCCCGATCAAGCGTGGCCG 119562 29 100.0 33 ............................. CACTCGCTGTCGACAGCGTTCAGGATCCGGGCA 119500 29 96.6 32 ...........A................. TCCGGTGCGATCTGGACGAACGTGCCCGGTAC 119439 29 100.0 32 ............................. AAAGACGCTGACGACCGGCGCCATCGCCGAAA 119378 29 100.0 32 ............................. GAGGATTGCTCATCGCGTGAACGGCGTCGGCA 119317 29 100.0 33 ............................. GACACTGGACCTGTGCACCCTCGGTCCCGCAGT 119255 29 100.0 33 ............................. GACACTGGACCTGTGCACCCTCGGTCCCGCAGT 119193 29 100.0 32 ............................. GTCCACGTCGAGCTGTTCCTGAATCCGATCGA 119132 29 96.6 32 ............................T GCGTGGTCCGCCTGGTGCAGCCGCCGCATGGA 119071 29 100.0 32 ............................. ACCACGGCAGCCCGTTCGGCGGCCGCCTGGGC 119010 29 100.0 33 ............................. AGTCGACGCGTACACGCGGACATTGGAGCTGAG 118948 29 100.0 33 ............................. GATCGACAGCCGCTGGTTGTCGTGCCATTCTCG 118886 28 89.7 32 ........-...T.G.............. AGGGCTGCAATGGAATTCGGCCTCGATGGGGA 118826 28 82.8 33 ....A...-.....A.......GA..... GCGTTCGTGACTCCATCCGCGATGACGAACGCC 118765 29 93.1 31 ...........T..A.............. CACGGGGTACGGCACCGTTGTCCATGATGAG 118705 27 89.7 31 ...........--...............T GGCCGCTCGCCGGCATCTGGCATGATCCGTC 118647 29 96.6 0 ............................G | T [118638] ========== ====== ====== ====== ============================= ================================== ================== 40 29 97.4 32 GTCTCCCCCGCGCACGCGGGGATTGATCC # Left flank : ATCACCGTGTCAGCCAGCGGCGAGAATCAGAGCGTGTTCCTGTCGTTTGTCGCGAGATAGTTCGCCGCCCACCCGCCCTGAACCGCGAAGCCGACGCCTGAAACCGGCTCCGGGGCCACGCTGTTCGACAGCTTCGACCAGATGGCACCCGCGCCGCGCGGTAGGCTGCGGTGTGCGCTAGTCTCTAAATTAGAGAATTAGTGAGTTCTCCTGCAAGATTGACAACTGAACACCGACCACCAACTCCGCAGCTGCGCTCCACTGCGTCGAGCTGGATGATCGTGGCGAAGACCGCGACCCGTACCACCAGGAGCACCCGCACCACCCCGAATTACCGGAACGACCACCGCTGCGCTCGCGAGAGGGCATCCTTGCGGCTTTCCGCTCGCCCAACGTGGCTAGGCGGTGTTTCACCCTGCCCGCACCACGTTCTCAGGAAACGCACAGGTTCTTTGGTAACAAAACGATAACGGCGAGGGTAAACCCGCAGGTCGCCTCTT # Right flank : CGGTACGCACGCATACAGAACAGGAAGGACCATCCAAATATGTCCGCGCCGAAAAGCAAGAATGAACAGGACGCCATCGACTACCACATCGGCGAAGCCCACAAAGCGGCGCAGGTGGCATCGGCCTACCTATCCGATGCCGTTGGACCGACAGAAAGCGGGATGACCCCAGAGCAGCTACAGCAACTCAGCTACTTCAGGACCACAGTCGTAACGGCCGCTACTCGGGTCGCCGACACGCACACCCGGCTGTTGAAACTCAGGCTCGCAATTGGCGATACGGCGTTTTAACCTTGCCGTCGTCCGTACAGTGCCCCGGAGAGAAACTGGGTGCAAGTCAACACAACCTTGACAGCCAATGCAGTACGGACCGAGAACACGGCTGGCCCTGGCGCCGTCACTTGTTGCCGAGCCCTGTGTCTCGCTCCAGCCTCAGCGCAGCTGTTCCGGGATCTGGTGGTCGCACCCGGGGATCAACTTGCGCTCCCCGAACCGCGTGG # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCGCACGCGGGGATTGATCC # Alternate repeat : GTCTCCCCCGCGCAAGCGGGGATTGATCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //