Array 1 27559-30270 **** Predicted by CRISPRDetect 2.4 *** >NZ_OCTU01000003.1 Urinicoccus timonensis strain Marseille-P3926, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 27559 28 100.0 33 ............................ TAGGCTTTGCGATTCACTGTTTTTGGATATTGC 27620 28 100.0 33 ............................ TCGCAGGATTGGACATGGCCGAAGCACAAAAAA 27681 28 100.0 33 ............................ CAACTTTATCCCAAAGTCGTCAGAAAAAAAAGA 27742 28 100.0 33 ............................ CGTAAATCTTTTTCCAACGTGAATTTGAAGGTT 27803 28 100.0 33 ............................ CATGTGATTTTAAGGTACTTTTTAAGTGGTGTA 27864 28 100.0 33 ............................ CCATACACGAGAAGCAGGGAAGTAGGTAACACC 27925 28 100.0 33 ............................ CGCGAAAGCATTGCAAGATATTTTTTTTCGCGT 27986 28 100.0 33 ............................ TAAACTCTTAAGGGTTTCCCCTCTTAAGGGTTC 28047 28 100.0 33 ............................ CTTTTACGAGCGGTTAATGGACTACCTGCCATG 28108 28 100.0 33 ............................ TAACCGTGTCTTGGTACCATTGAGACAAGCAGT 28169 28 100.0 33 ............................ TCACATGTTTAGTTTTCCTTGGGACCAGCCTTT 28230 28 100.0 33 ............................ TCAACTAAAAACAACATAATCTATATTTCGTAA 28291 28 100.0 33 ............................ TGAAAAAGTATTTTTTAGAAAAATTAGAAGCTA 28352 28 100.0 33 ............................ TCTCTTCTGCCGTCTTAATGGATTGACCCTCAA 28413 28 100.0 33 ............................ CGGCTGTCCCCATGTCAATAAAGGCATTTTTTA 28474 28 100.0 33 ............................ CTGTATTGGCTGCGTAAAGGGTGGCAAGGGTTA 28535 28 100.0 33 ............................ CCAAGGTTGTCATTGGGGAGAAAAACAAGAATG 28596 28 100.0 33 ............................ CGTTGAAAGAAAAGGGCAAGACCCTTTTGATTT 28657 28 100.0 33 ............................ CATTGTTAACTGTGTTCTTAATTTCTGTTAAAT 28718 28 100.0 33 ............................ TTTGAGTACAAGTGGGAAAATGAAAATCTACTT 28779 28 100.0 33 ............................ TCGTCAAACCTCAACTTTGCAAGTATGCAGACC 28840 28 96.4 33 .....................G...... CATTTATAAACTACCTAGAAGTTTTGATTTTAG 28901 28 96.4 33 .....................G...... TATCAATACCTTAAGCCTAGAGCTTTGTATCAA 28962 28 96.4 33 .....................G...... TCTCGAGCAAACCCCCCCTTTTTGAGACTTTCA 29023 28 96.4 33 .....................G...... TACGGGTTCATCTACTTCGCACCATGTGATGAA 29084 28 96.4 33 .....................G...... TCCCGGAGCCGGGGCTGGAGCTATGGCCCACTA 29145 28 96.4 33 .....................G...... CACATCCTCACTTAGGTTGTCATAGTTGGCCAC 29206 28 92.9 33 .....................G.A.... TAAAGCCCTTGATACCGCCAACTACGTGGTTAA 29267 28 96.4 33 .....................G...... CACGACTTGGCCCGACTGACCAAGGCCCTGGAC 29328 28 96.4 33 .....................G...... TGACAACGGAGTCTGGTGGTGGCGACTGGACCT 29389 28 96.4 33 .....................G...... CAAGGTCTGGGAGGGGGCTCCCGAAGTGGTCAA 29450 28 92.9 33 ..............T......G...... CCTACCTCCTTATGCTGCTTGAGTAGTTTCGGG 29511 28 92.9 33 ..............T......G...... TGCCGTGACGGCCAAGGTGGTGGAAAACAACAC 29572 28 92.9 33 ..............T......G...... TACAGATGACTAGACTGGACCTGGCCTTGGATA 29633 28 92.9 33 ..............T......G...... CAGATGGACAGATAAAAGCCTTTAGAATTGCTG 29694 28 92.9 33 ...T.................G...... TGACTATAGTATAAAACCAGGAGAGACCTTAAA 29755 28 92.9 32 ...T.................G...... GTCGCCGGATATTAACCAATTTAAAAAGGCTA T [29780] 29816 28 89.3 33 ...T.................G....T. TATCTGTTTTTAATTCAAGATCGTTTGTGTTTA 29877 28 89.3 33 ...T.................G....T. TTACTGGACCCGGGGCATGGTGGAGGTCCTGGG 29938 28 92.9 32 ...T.................G...... CTAAACAGCTTGAACGACGCTAGAATAGAAAT T [29963] 29999 28 92.9 33 ...T.................G...... TGGAACCAAGAAGCCCAACAGGCCCTAGTTACC 30060 28 92.9 33 ...T.................G...... TGGTCTTGCCTTTACGCTTGCTTATCTTCTCAT 30121 28 92.9 33 ..............T......G...... CAGGACAAGCGATATTGTCTTTAACATCGTTTT 30182 28 96.4 33 .....................G...... CAATTAGAAACAATTAAAAAATCAATTATTAAC 30243 28 82.1 0 ......T...........A...C...TT | ========== ====== ====== ====== ============================ ================================= ================== 45 28 96.6 33 GTACTACCCGCACACGCGGGGATGATCC # Left flank : CTAAACCCGCTGGAAGATTCCATTTTAGAAATCGGAGCCATAAAAAAAGCAAAAAATATTGAAGAATTTCACACTATGATACAATATAAGGGAGAGTTGAAAAGAGAAATCCAGGAACTCACAGGAATTAGGGCGGAAGAGCTAGAAAAAGGAGAAGAAGAAAAAATTGCCATAGAGGAACTATTAGACTTTATTGAAGATAGACCAATCCTGGGCTATAACATTGATTTTGATATAAAATTTATCAATGAAGCCTTAAAAAAACAAGGTTTAGATAAAATACGCAATAAAACATATGATATTATGAAATATGTGAAGCGAGAAAAACTTTTTCTAAAAAACTACCAGCTTCAGACCGTGATAAAAGAATATGGAATGGAAGAAAAAGTGCCTCATCGGGCCCTAGAAGATGCAAAAATAATACAAGCCCTAGCAGAAAAAGTAAAGGGATTGATGGAAAAGTTAAAATGAAAATGGCTTAGAATAGGGGATCTTTTACT # Right flank : TATATTTCAAGTTATTAAAAAGCCTTGGTGAAAGATGACTGGACTAGAGTCTTAAAAAAGAGAAAAGACATGATTTAAATATTAATTTTTAAACTTTTAACTAGCTGTTCAACGAATAAGGAGTTAATTGAGGTTTGGAGCTTTTTCATTCAAAAAAAGAAAGCAATGAAAACATGGGAACTGAAAGATGTTTTGATAGGGTCCCTTAAAGAGAAAGAAGAATTAAGGGCTATTATAATGAGAGAGTTCATACGTATGGGGATTTTACATCCTAGTCTAAAAATCAAACTATCGATTTAAAAGAGCATTGGAGATGGGGAGCTGCTTTGCTAGGATAAAGTAAAGAGACGAGGAGACAAGTCTCATAGCTACTTTGGCTCTTATCATCGATATCTGCTGCGTCCTGGGTTGGATTCTATTTTTTATTCCAATAGGTCTACTGAGTATTTTTACTAGAAAAAAGTAAAAAATAGATTTTTTAATGGGACAGGCCCAGGTTT # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.67, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTACCCGCACACGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //