Array 1 1104851-1109194 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021255.1 Desulfobulbus oralis strain HOT041/ORNL chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================================================================== ================== 1104851 28 96.6 33 .................-........... GTCCTTCGCCTCCCGGCGAAGACCACGTTATGC 1104912 29 96.6 32 ............................A GGGTCTTGCCCCATGGGGCGGCCCGCCATCCA 1104973 29 100.0 33 ............................. GCGGTCAGGGCGATCTCGATGGTTTCCCGGTCG 1105035 29 100.0 33 ............................. GTCCTTCGCCTCCCGGCGAAGACCACGTTATGC 1105097 29 96.6 32 ............................A GGGTCTTGCCCCATGGGGCGGCCCGCCATCCA 1105158 29 100.0 33 ............................. GCGGTCAGGGCGATCTCGATGGTTTCCCGGTCG 1105220 29 100.0 31 ............................. TTTAAATCCCCCGCCGGACGAACCGGCGGGG 1105280 29 100.0 32 ............................. CTGGTCTATCATCTGCGGGGCCAGCGCGCTTC 1105341 29 100.0 32 ............................. CCGTCTCTGCGCGACATCACCAAATCCCGCCG 1105402 29 100.0 32 ............................. CAGACGGTATTTGCTCAGCTTTGGGGTGTGGA 1105463 29 100.0 32 ............................. AACAGAATGTAAATATGTTTCAGGATTCTTTG 1105524 29 100.0 32 ............................. TCGTTTCTGGTATTCAGGCAGACTGGCTATGC 1105585 29 100.0 32 ............................. TCGTTTCTGGTATTCAGGCAGACTGGCTATGC 1105646 29 100.0 32 ............................. TGTCCAGAAAGCCAGGCTCCCCCCGCCCATGA 1105707 29 100.0 32 ............................. CTCCATATGAACACTATACCCTAATCGAGCCG 1105768 29 100.0 32 ............................. GGAGGTATCAGGGGTGATTTGTTCGACTGAGT 1105829 29 96.6 32 ............................T TCGTTTCTGCTCCAACTCTATAATATGAAGCA 1105890 29 100.0 32 ............................. ACAATGCATCAGCTGTCGGCAGCGCCCAGAAA 1105951 29 100.0 32 ............................. ATATCTCTGGCTTCATCCAGAATGGTACACAT 1106012 29 100.0 32 ............................. ATATTTATGCGCAAGAATTTAGGTTCGCCCTG 1106073 29 100.0 32 ............................. TGGGTAACCTGGATTGGCAACGGCTTGGTAAT 1106134 29 100.0 32 ............................. CGCCGAGCTAGCGGTTTTGCGTCCACACAAAA 1106195 29 100.0 32 ............................. GGCTGATTATGGAAGAATGAACCGCCTGAAAC 1106256 29 100.0 32 ............................. TGTTATCTCCGCCGAGGCCCAGTCGTCCGGCG 1106317 29 100.0 32 ............................. GGCTGATTATGGAAGAATGAACCGCCTGAAAC 1106378 29 100.0 32 ............................. TGTTATCTCCGCCGAGGCCCAGTCGTCCGGCG 1106439 29 100.0 32 ............................. GCCCGGTAATATCACTGCCGCCGCGGGCATAC 1106500 29 100.0 32 ............................. CAATGGTCGCATTTGACTCGGGGCAGCTTCGC 1106561 29 100.0 32 ............................. CGACCAGGGCGACCCCGCAAGAACGGACCCCA 1106622 29 100.0 32 ............................. GAGGCGCAGCCATGAGCGAGCAGCTCTCCCTC 1106683 29 100.0 32 ............................. TGGGCAACCTGCAATCCCAGGTTGATGTATGG 1106744 29 100.0 32 ............................. CGCCTGTGGGCCACTCTGACCGGTGGGGATGT 1106805 29 100.0 32 ............................. AGCTGGCCGCCGAGTTGAAAAAGCCCCACGAA 1106866 29 100.0 32 ............................. CTGGAATCCGCCATGGATGCGGTGCTGCAGCT 1106927 29 100.0 32 ............................. CATCTTGCCAATGAGTATGTTGCGCGGCAACA 1106988 29 100.0 32 ............................. ATTTGCAGAGGGCGAGGCGGCGGTACGAGGAA 1107049 29 100.0 32 ............................. TCGGCAGGCATTCTTCCAGCTGTTTTTCCAGC 1107110 29 100.0 32 ............................. CAGCTCTTCGCGGTCAGCCAGCAGACCGGCAC 1107171 29 100.0 32 ............................. TCTGCATTGAACAATGCAGGCTCCCATGTGAA 1107232 29 100.0 32 ............................. CTGGATCGTCTTTCCAGGTCCCTGCGTGATAT 1107293 28 96.6 32 .....................-....... GGTTTGAGGGAAAATCGTGTCCGCTCGGTGCC 1107353 29 100.0 32 ............................. GCGGAATACGAGGGGCTGGCCGTCACCTTCGG 1107414 29 100.0 32 ............................. CACGTCACTTAACCCCTGATGCCGCAAAGCCT 1107475 29 100.0 32 ............................. GACACCGGATCCCATAGCCTGAGCAAACTGCA 1107536 29 100.0 32 ............................. GTTTGCGGGTCTGCATAACACCGGCTACCAGA 1107597 29 100.0 32 ............................. ACTGACGGCAAGGGCAGCCCAGAGTGGCACGC 1107658 29 100.0 32 ............................. TCTGTAATGTTGTCTCTATCGGCGGGGTGGAA 1107719 29 100.0 32 ............................. AAATGGTAACAACCCAAAGCCCAAAAGAAGAT 1107780 29 100.0 32 ............................. AATCAGGCACACGCTATCATTTCCGAGTTTTG 1107841 29 100.0 32 ............................. CAGATGAATTTGTCGCAACCTTCCCTGATTTT 1107902 29 93.1 138 ..........................G.A AAATAAGGGGCAAAGACCGCTCCGGCTCACGAAGCGGCCCGCGACGCATTCCCTGGCGGAGTGGCCTCCCTTGGTGCGGCGCGTCCCTTGGAAGCAAGAATACAGCACGTGAGGGTCAACATCAAGGAATGCCTGAAA 1108069 29 100.0 32 ............................. CTACGAGGGCGGCGCGGAGATAGAGGGCGGGC 1108130 29 100.0 32 ............................. TTGATGAGCACAAAAACGATTAAAAAATGCCC 1108191 29 100.0 32 ............................. CTTGTGACGGTCACAAGCAAAACCACCAGGGC 1108252 29 100.0 32 ............................. TCATCAACGGCGATGACTTGGGACAGAGCCCG 1108313 29 100.0 32 ............................. GCGTGGAAACTGAGCATCAAGGCGGGCAGCTC 1108374 29 96.6 32 ...........G................. CCAGGTGCGCTCATCTGGCCAGAGCCATTGTC 1108435 29 96.6 32 ...........G................. GAGACGGCCCCGCCCGCCGATTGCCAGCTTGT 1108496 29 100.0 32 ............................. GCCCCGGCCTCGTGCACGAATTCGGGGCCGAC 1108557 29 96.6 32 ...........G................. ACTTATCTACTGCATTATAAAGCATACTCAAA 1108618 29 100.0 32 ............................. ACCAGGGCCGCGTCTCTGGCGTCCGGGTACTG 1108679 29 96.6 32 ...........G................. GCAAGCATCGAGCAGATGAAGACCCGACTGTC 1108740 29 96.6 32 ...........G................. TCAACCCGGTCGCAGGCCGGCGGCGACGAGGG 1108801 29 100.0 32 ............................. TGGTGATCGAGTTGAATTTAAAAAACAACTTG 1108862 29 96.6 32 ...........G................. GTGCGCGTTATCGTCATGCGGCCGCCATCGTC 1108923 28 93.1 32 ...........G.....-........... AGTACGACGAAAGCTGGAAGGAATGGTCAAAC 1108983 29 100.0 32 ............................. AGACGGAGCAGAAATGTCCAGACTGCGGCGGC 1109044 29 100.0 32 ............................. ACGGGCACGGTAATTCCGGCGATGATGATCAG 1109105 29 96.6 32 .....................C....... GCGCAGGCCATGGCCGAGAGTGCTCTTGACCC 1109166 29 86.2 0 ...........GT.T...........T.. | ========== ====== ====== ====== ============================= ========================================================================================================================================== ================== 70 29 99.0 34 GTGTTCCCCGCACCCGCGGGGATGAACCG # Left flank : CGATCTGTTTCGCGAGCAGAAGCTACTGAGCCGCATCATCCCGGTGATCGAGGAGGTGCTGGCCGCTGCCGGCGAAAACCTGCCGCAGGCACATCCGGAAGCCGTACCGGTGGCCTTTCCCGACAAGGAGGGACTGGGTGATGTTGGTCATCGTCACTGAACTGGCGCCACCCAGGCTGCGCGGATTTCTGGCACGCTGGCTTTTGGAAGTACGGGCCGGCGTATATGTGGGCAATTACTCGGTTCGCGTCCGAGACCGACTGTGGGCAGTGGTGACCGAGCAGATCGAGGATGGCAATGCGGTCATGGCCTGGAGCGCCAACAACGAATCGGGCTTTTCTTTTGTGACCGCAGGTCGAAACCGACGGGAACCGGTCGATTTTGACGGTTTTTCTCTGGTGCGTTTTTTACCCGAGATACCGGAGGGAAATTAGCAGGAAAAGTTGGTGGATTTTTTTGTGCTGTGTAATTTATTGGTATGTCGTTTTTTTATTGGAAGA # Right flank : GCTTGCAGGCGAATGGAGTGAAGAAAGCAGCGATCTGAACCGCATTATGCAGGAGCTTCGGATCAGGCTGGGATCGATGTACCGTGAGCAGGTGGCGCGGGAAGTATCTGGCGTGCGCAAGCTGGTTGACAAATACTTCCCGGAGGAGAAACAAAAGAACGCGAACAGCGAGTTTCTCGCGGCACTGCAAAAGTTGTATGATGGTTTACTGTCTGGCGCCACCAAAGCGAATAATCGCGTGTTTTACGATCTGGCCGCGAATATTGCGGTGATGGCTGCCCGGCAGTGCAAGGTGTCGCCGGATTCGCTGACCAGGCATTTGCAGGCCACGGTTGCCCGGTATGCCGAGATCGAGGCTGGCGATTGCCTGCAATCATCAGTACGGCAATTGCGGGAGCTGGCTTTGGGCGAAATCGACCCACGGGAAGCCCTTCTGGACCGGCTTGCACAGTGGAATGCCACGCGGGCCGAGAAGCTGAGCAAAGTGGCGGCAGTGCATG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1680921-1686646 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021255.1 Desulfobulbus oralis strain HOT041/ORNL chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 1680921 31 100.0 35 ............................... CTGTCGCAAGGGAGAGGGAACAGGATGGCTATCCT 1680987 31 100.0 34 ............................... CCAAAGACAATCAAGCATTTCAAAATCTCGATTG 1681052 31 100.0 35 ............................... ATCATGTACGATATGCATGCTGAAGAAGCAAAAAG 1681118 31 100.0 35 ............................... TATGCTTGTACTCGAAAAGAACGGGTACATCATAG 1681184 31 100.0 34 ............................... GTGTAGTACCTGTCAGCACAATACTGGCACACAA 1681249 31 100.0 36 ............................... ATCGGCTCCTGGCAGACCCTCTGGGAAGTCCTGGAC 1681316 31 100.0 33 ............................... AAAAAGCGTGTGGACAGGTGTCATACCAGGCGT 1681380 31 100.0 34 ............................... CGTGGACGAGTCCGCCTACACACTACACCAGCGC 1681445 31 100.0 34 ............................... ATTTTGCAAAGTCCAAATCTCCGTTTTATCCCTC 1681510 31 100.0 35 ............................... GTATAAATCGCCCCCAGGTATAACCACCCACCATG 1681576 31 100.0 37 ............................... TTTGGCAGTGCTCCAACCAGCGGAGCACGCGGATAGA 1681644 31 100.0 35 ............................... CCCTAATAACTCATAAAAAACCTCCTGCGGCCACA 1681710 31 100.0 35 ............................... ACCGTCGTGCCGCGATGGGTTTGAACACGACCTCC 1681776 31 100.0 36 ............................... CTCGCCATCATCTCGATCCTGGTGGCGCTCTGCAGG 1681843 31 100.0 36 ............................... GACGAGCTTGCAGCGGTGGCGGATCAGGAATGGCTG 1681910 31 100.0 36 ............................... TGCACCCCGATTTTCCGGGCCATGCTGGACGCCGCG 1681977 31 100.0 34 ............................... CTGCATCGTGCCTGGGACTGCCATGATCTGACGC 1682042 31 100.0 34 ............................... CCGGCCCTCTGTGGCCAGTTGTGCCGGGGTGCGC 1682107 31 100.0 36 ............................... CCAAATGGCGGCCCGGCGAGGTCAGCGTTACGCCCA 1682174 31 100.0 34 ............................... AATTTTTGAATTAATCCATAATCCTAGTAAACTA 1682239 31 100.0 36 ............................... CACCCTGAAGATGATACAAAGTGATATTGCACAACC 1682306 31 100.0 35 ............................... ACATATCAAGAGATGAAAAGTATGCAGGATTTAGC 1682372 31 100.0 34 ............................... TTGGAAGACAATCCTAACTGGTACTGCACGGAGC 1682437 31 100.0 34 ............................... CCGAAAAGAATTTAATTACCAGCCAGTATATACA 1682502 31 100.0 35 ............................... CTGAATTTGCTCATAAACAACACTACTCATCCGAC 1682568 31 100.0 33 ............................... CCGTTTGTCGGAACGGGAAGTTCCCATTCCACC 1682632 31 100.0 35 ............................... GGACTGCTCTATGTACTGCTCCCAAAGCCAGTCCC 1682698 31 100.0 36 ............................... GCGAACATATTATACCTCCGGCGGGTAGCCCCGCGG 1682765 31 100.0 35 ............................... AGTAGGTCCAAGAGTTCGCCCATGGTTTGGGCGAA 1682831 31 100.0 34 ............................... ATCTCCTTGGGCTTATTGCCCAAGGAGATACGGG 1682896 31 100.0 35 ............................... GCCCATGGTTTGGGCGAACTCGTTCTCAAGCGATG 1682962 31 100.0 33 ............................... AAAAATTTGAATTAATCGATAACGCTAGCTTGC 1683026 31 100.0 35 ............................... CCGGAACCTTTTTATAAGTTATTTCAACTCGTAAA 1683092 31 100.0 34 ............................... TTTGATGTTTTTCCGGACTGCGTCGGAAATCCCG 1683157 31 100.0 34 ............................... CCGGTACTGGGAATCCCAGGCCCGGGAATTCCCA 1683222 31 100.0 34 ............................... CTTCTCCCAAACAGAGTAAACGAGAAAAAGAAGC 1683287 31 100.0 35 ............................... GCAGGTGCTTAAACGCAATTATGGGGGGCAGTTGG 1683353 31 100.0 34 ............................... CACGCCCATTAAATTCGAGGGCCGGCTCCTGCAG 1683418 31 100.0 34 ............................... TCTTTGGTTCACCCATGCACGTACGGACAAGGAC 1683483 31 100.0 34 ............................... TTTGTATCCTGTTACCATTATATATAGTGTACTT 1683548 31 100.0 35 ............................... ACGAGTACCGGATGAACCAGGACTTGCCGATTCTG 1683614 31 100.0 35 ............................... TTTTGCTTGTGACTGTCACAAGCAATCATGGGACC 1683680 31 100.0 34 ............................... ACGATATCGATCGGGCCTGTGCATAGTGTGGTGG 1683745 31 100.0 36 ............................... TGCGCCTGTACCTGTGCCTGTTGCTGCACCGGAGGC 1683812 31 100.0 34 ............................... AGCCCCGGAGGAAGACTGGTGATGGCGTCGGAAC 1683877 31 100.0 35 ............................... CTTTGCCATAAAACCAAAGCACACCGAGAAGTTGT 1683943 31 100.0 36 ............................... CGCGCAATGCTCACACCATACTTGCTCTCCTTCATC 1684010 31 100.0 35 ............................... TTGATGTACCAGTCACTGTGCTTCATGGTAGTCTC 1684076 31 100.0 33 ............................... TGCTGAATAGTGGGAATTCCCGCTCTTGATAAC 1684140 31 100.0 35 ............................... ATTATAAACCAGCATAAGGCAATGGAGGGAATGTC 1684206 31 100.0 34 ............................... TTGAAGGATTCTGCCTATTTTACAGGACACCCTG 1684271 31 100.0 34 ............................... GTCAAAACAATATTGACTGGACGATATATGATAT 1684336 31 100.0 33 ............................... CAAAGACAATCAAGCACATCAAAGTCCCGATTG 1684400 31 100.0 33 ............................... CCACAAGAGCGTGCGCCCTATGATGTACCCTTT 1684464 31 100.0 35 ............................... ATGAGTTCGAACAACCGCAACTGACGCCGGCGATG 1684530 31 100.0 34 ............................... GTTCGAGATGATTTCAAAGAAATATCTCAACATA 1684595 31 100.0 34 ............................... TTTGAAACGGACAAACAGGGAGGATTCTGGCATG 1684660 31 100.0 34 ............................... ATCGTTTTATGGCAAATATGCAGAAAAAACTATT 1684725 31 100.0 34 ............................... CAATTCTTTTGGGTCGAAGGTAAAACTATCCACT 1684790 31 100.0 35 ............................... TGTTTTCTATCTTCCCAAGATACCAGTTACTAGTC 1684856 31 100.0 34 ............................... CCAGAAATGGCAGGGCGACACCTGAATATGGGTG 1684921 31 100.0 34 ............................... CGGTATTGGGAATCCCAAGCCCGGGAATTCCCGC 1684986 31 100.0 35 ............................... ATACCAGCAAAGAGAAGTACTTTGCTGGCATGAAA 1685052 31 100.0 34 ............................... TGCAAGTCATGTGGGCAAGAGCACACCCGCCATC 1685117 31 100.0 34 ............................... TCATTTTTTTGGCAGCTAGGATAACTAGCTGCCA 1685182 31 100.0 33 ............................... ATTTTTGGGAGATTTTAGCTATGTTTACGTCGA 1685246 31 100.0 34 ............................... TTTTCCTAGCCGAAAATCCGCCAGACTGGCAGAA 1685311 31 100.0 33 ............................... AGGAACAAGGGCTTGAAAATATGAAAAGAATCA 1685375 31 100.0 34 ............................... TGTATCAGAGTTAACAACCAGTCTGGCAGGAATA 1685440 31 100.0 33 ............................... CCGGGCGTTATCAGAATTGTCAATGGTGGGCAA 1685504 31 100.0 34 ............................... TGCCTTGCCCCAAGTGGGCAAGGCAACATGTATA 1685569 31 100.0 34 ............................... CAATCTGGGCCGATTTTTGGTCGGCCCATTTCTG 1685634 31 100.0 34 ............................... CAATCTGGGCCGATTTTTGGTCGGCCCATTTCTG 1685699 31 100.0 36 ............................... CCCAAGAGCACTCGAAAGTGCTCTGGCATCTGGTAA 1685766 31 100.0 34 ............................... AATCCATGTTAAGGGAGGAAGACCCAAATTCCTC 1685831 31 100.0 35 ............................... AGTTTTAAGAATAAAATTCCACTAGCGAAAAAAGT 1685897 31 100.0 35 ............................... CGGTTGGCTAAAATTTTTTCTGCAGTTTTCATAAC 1685963 31 100.0 34 ............................... CCAAAAATGGGCGGACTGGAAAGACCGCCAGATT 1686028 31 100.0 34 ............................... CTGTGGAAAGTGCGGCCTCTAGACCCCGGGCCGG 1686093 31 100.0 35 ............................... CCGTCGAAAACGACGGGAATTCCCAGTTTTCTGAC 1686159 31 100.0 34 ............................... CTATAGTGGGAATTCCTTTAATCCTGCCAATACC 1686224 31 100.0 35 ............................... TTTTCCTGACTGAAAATCCACCAGACTGGCAGAAC 1686290 31 100.0 34 ............................... TTCAAGGCACGCATCCCTACCTAGTGTATCTATC 1686355 31 100.0 34 ............................... CCCACATTGCTTTCCAGTTATCCGAAAACTGGAA 1686420 31 100.0 34 ............................... CTGTGGAAAGTGCGGCCTCTAGACCCCGGGCCGG 1686485 31 100.0 35 ............................... CCGTCGAAAACGACGGGAATTCCCAGTTTTCTGAC 1686551 31 100.0 34 ............................... CTATAGTGGGAATTCCTTTAATCCTGCCAATACC 1686616 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ===================================== ================== 88 31 100.0 34 GTCGCCCCTTCACAGGGGCGTGAATTGAAAC # Left flank : CTCCGCCGTATTGCCCGGAAGTGCTGCAGTTGGGGCCAGCGGGTGCAGTACTCGGTCTTTGAATGCAGCCTGACGCCAGCCCAGTGGACAGCTCTGCGCGCCGCACTGATCAGTGAGATGGACGAGGACAAAGACAGCCTGCGCTTTTACTTCCTGGGGGCATCCTGGCGTGGCAAAATCGAGCATGTAGGTGCCAAACCGGCCTACGATCCGGAAGGGCCGCTGATTTTCTGAGGCAGGTGAGGCAGCCTTTATCAAGGAAAAGCCTTGGGCACTGCTTCCCGGAGACTCAAATTTGCCATGGGGCTGTTGACCAGGACTGCGGGAACCTGAAGCTGGCTCAATTGCATGGGGAGGTCCACGATCAAGATAATAGATTGAGATTGCAACGTTTTTTTTGCTAAGACCCACAAAGGGGACAGGATGATCTGCGTTTTGTCGCCGGTTCCCCGCAAAGATCTCCAAAACGCATATGATTTTGCGGAATTATCACCGCAACC # Right flank : CCAGATATCCCTAGGCTCAGGCCTCATTAATTGCCAAAAATCAGAAAAGTTGGTTAGTTGTGCTCAAGGAGGACGCCATGAGCCAACTTTTCTACCTTTCTGCCGAACAACTCGAACGTATCAAGCCCTTCTTCCCACGTTCACATGGTATTCCGCGGGTCGATGACCGGAAAGTCATCAGCGGCATCATTTATGTCATCAAGCATGGCCTGCAGTGGAAAGATGCGCCGCGCGAGTATGGCCCGTACAAGACGCTCTACAATCGTTTTTTGCGCTGGAGCCAGATGGGCATCTTCAACAACATTTTTACCGAATTGGCAAAAACAGCGGGACAGGATGGCCAGGTGATGATCGATGCGACCCACCTCAAGGCGCATCGTACCGCCGCCAGTTTGCTCAAAAAAGGGCTCTTTCCCGCTGCATCGGCCGCACAAAGGGCGGGCTGAACTCCAAACTCCATGCCCTTTGCGACGGCCACGGCAGGCCCCTGGCCATGAAGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTTCACAGGGGCGTGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : NA // Array 3 1963764-1951704 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021255.1 Desulfobulbus oralis strain HOT041/ORNL chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 1963763 35 100.0 36 ................................... GGCGCTGTGCCTTGCGTTTCAGATTGTTGCTCATGT 1963692 35 100.0 41 ................................... GCTCTTTCATGGTATCCCCAAACTCTTTCTCAAGCGATGGC 1963616 35 100.0 40 ................................... TCTTTCTCAAGCGATGGCAAAGCCATCGCTTGAGAGCGCA 1963541 35 100.0 40 ................................... GACGCCGCAAATACGCGGCGTCCTGAAAATCACGGGAATT 1963466 35 100.0 41 ................................... ACGTGGGGAGTGGCAAGGCTTTCCAGCCTTGCCATCGTTTG 1963390 35 100.0 37 ................................... CTGGAGCGCAGGGGCAATGTCCTGGTCACCTGGCAGA 1963318 35 100.0 42 ................................... CGACCAATTTCGGTCAGGTCAATCAGAGTCTCGTTCATGGTA 1963241 35 100.0 40 ................................... CAAAGTTTGATCCCTGTCCAATTATTCAGATGAAAGGTAC 1963166 35 100.0 38 ................................... TGTTTCGTAAGCCGTCAATGGTTTGTCCGGCTTGGTAT 1963093 35 100.0 39 ................................... TCGTGCAAGGCGCTTTCGATTTGTTCTTTCTTTCTCCGT 1963019 35 100.0 37 ................................... GGGATGGGAAAAGCCTGACAGTAGATGCTTCTGAACT 1962947 35 100.0 38 ................................... CAAGAATCAGTCTTCGCCCATTGGGTACATAGGCTGTG 1962874 35 100.0 41 ................................... TGGTGTTGTTGATGAAACCATAATCCCTCGTTGTAAGCCTG 1962798 35 100.0 42 ................................... CCTCGATGGCTGTTACATCGTTTGCTCTGATAAAGTCGTCGG 1962721 35 100.0 41 ................................... CTTCCGAACTCCAGAGGTGAATAGTGCCTGCGCTCGATCAG 1962645 35 100.0 40 ................................... GATATTGGGCGTTGCCTTATACGGATCCTTGATTGGTTGC 1962570 35 100.0 34 ................................... CATCAGTTGCCCGTTTATTACAGTACGTAAACTA 1962501 35 100.0 42 ................................... GCATCGGAGACCCGCTGCACGTTGGGGTCAACCTTTCGCATG 1962424 35 100.0 40 ................................... CGAAGACCTTGTTCTCGGCATCTTTGGTCTGCTTGTTCAG 1962349 35 100.0 37 ................................... GTAGAAATGTTTCTCATATGCTTCCGACGGGTTTCGT 1962277 35 100.0 38 ................................... GTCCGGTGCGACGTACCTGTTTACATCCAACGCCTGCC 1962204 35 100.0 39 ................................... TGACTGCATCAGTATTACCAATGCAGTTCGGATAGGATT 1962130 35 100.0 40 ................................... ACCTCTTGGGTGTATTGTGCAGAACGCTCTTGCTCAACTT 1962055 35 100.0 40 ................................... AGGCCCAGGAAGAAGGCGCAAACTTCCTGCAGGCCTGCCG 1961980 35 100.0 35 ................................... GCTGGAAGCTGGGAGCTTGCCTAACAGGCAAGCTC 1961910 35 100.0 39 ................................... ATACCTCCTGCCAGCGGGTAGCTGGCTGTGGAGCGCCAG 1961836 35 100.0 42 ................................... CCGCTTGCTCGAGCAAGCCGAACGCTTGCTCGAGCTTCTGGG 1961759 35 100.0 41 ................................... CCTAACAGGCAAGCTCCCAAAGCTGGGAGGTGGCTTTCCGG 1961683 35 100.0 43 ................................... AGGAAAAGATCAGATGTACGATAGCCATCATGGGCTATCGTAC 1961605 35 100.0 37 ................................... TCCGTACTGCCAGTACTACAGTAGGTACAAGATTAAG 1961533 35 100.0 39 ................................... GGTTGCGAAATATGAACGCTTCCTCTTGTGCGCGAAGCG 1961459 35 100.0 38 ................................... TAACTGCCGCAGCCAGCAGATTCCGTAACTGGAAGCCG 1961386 35 100.0 40 ................................... ACTTCCTCCAAGCCCGCGCCTTGGGCTTGGAGGAAAAGAA 1961311 35 100.0 34 ................................... CAAGTATCCAGCCTGGGTAGCTTGCGCGCTCAAA 1961242 35 100.0 41 ................................... GAAATTTCTTGATTTTTAAAGGAAGAAATTGGGGAATTTGT 1961166 35 100.0 40 ................................... CCCTTGGAGAATGAAGCATTTTTCCTGAAGTAGCGGAAAT 1961091 35 100.0 41 ................................... GTCGGAGAAATTGCGGGAATTTTGAGAGTCACAAGAAACAG 1961015 35 100.0 39 ................................... ATTATAGTTGCGACAAGCTGATTGCGGAAGCGGAACGCT 1960941 35 100.0 34 ................................... AATTTGTATCTGGCAGTACGGACATATTGAAAAC 1960872 35 100.0 37 ................................... GGGTATCGAGATTACGTTCTGCAGTTTCGGCTCTTTT 1960800 35 100.0 43 ................................... GCAGATTTTCTCTGGACTCTACAGTTTGGGCAGAACCAATCTG 1960722 35 100.0 37 ................................... GCAGTACGAGCCGCGTTGGAGGTAGGCTGATGGGCCT 1960650 35 100.0 40 ................................... GGAAGTAGACCTTCCTGAATGAAAATTTGAGTCACTTTTT 1960575 35 100.0 41 ................................... AGTTCTGGTGCAAGGTCTTGCTCGCCCGGCAAAACGCCGGG 1960499 35 100.0 38 ................................... TGAGCGCGAAGCTCGGCTTCGCGCTCGCGTTTGGTCTG 1960426 35 100.0 38 ................................... GCTTGAGACCTCAATTTGATGATTTCCGCAACCAGTTG 1960353 35 100.0 39 ................................... CGGAGGAATTCCCGCTCGTTAGAGCGGGAATTCCCAGAA 1960279 35 100.0 38 ................................... TACAACAAGTTCACTGGATTCTCCTGTATAAGTACAAC 1960206 35 100.0 41 ................................... CCGGCAAAACGCCGGGCCGTACCTTGCCCGTGGCCAGCGCG 1960130 35 100.0 38 ................................... CGCCTTTTCCGCCGCCTTTCGTGCGGCATTGAAAGACC 1960057 35 100.0 36 ................................... CCAAGTTAAGGTCACTCAAACGCCGGAGGAATTCCC 1959986 35 100.0 41 ................................... TTGTGCCGGCAATTTGGCCGGCCAAGTTAAGGTCACTCAAA 1959910 35 100.0 38 ................................... GGAGGAATTCCCGCTCGTTAGAGCGGGAATTCCCAGAA 1959837 35 100.0 35 ................................... CCAAGCGGGCCTCCGCTGCTTGAGCGCGAAGCTCG 1959767 35 100.0 41 ................................... CCGGAGTTCTGGTGCAAGGTCTTGCTCGCCCGGCAAAACGC 1959691 35 100.0 38 ................................... TCTTTTGGGTTCGCCTTTTCCGCCGCCTTTCGTGCGGG 1959618 35 100.0 37 ................................... CAAGTCAGAAAGGCGCCTCAAAAATTCCCGTTCATCA 1959546 35 100.0 39 ................................... GGGAGTAACCCAAGGGAAACAAAGGTATCCGTCACGCTG 1959472 35 100.0 40 ................................... GAAGCCTGGCCTCGGCCGCATCGGCCCTTAAAAGGGCCTC 1959397 35 100.0 39 ................................... TCCCAGAGTGGTCACATGGGATATCCAACATCCCGCATA 1959323 35 100.0 40 ................................... TTGGAGTTTTTCCCGTCGCGATCCCTGATTTCCCTTGGGA 1959248 35 100.0 37 ................................... CTTCTTCCAGAGTAGGCAAAGGCATACTCTGGCTGCG 1959176 35 100.0 39 ................................... TTACTGATATTTGGTACCAGTAACCAGAAAAAGGATAAT 1959102 35 100.0 43 ................................... TTTCTGGTGGCAAGCTGGGCATTCCGGCTTGCAAAGATTTTTT 1959024 35 100.0 39 ................................... ACGATCTCTCCCCACAGGCTGCCAACCTGTGAGGAGAGT 1958950 35 100.0 37 ................................... ACGGTGTCCGGAGCGATCCTGGCAACAGGAGTGCCGC 1958878 35 100.0 36 ................................... GTCGATCCACGCAGCCAAATCGCCGCCCAGCTCGCA 1958807 35 100.0 36 ................................... GCCAGCATCCGGCGTTTGAGCTGCTTGTCGATCAGC 1958736 35 100.0 37 ................................... GCGGGCAGGAAAGAGCGGTTTGCTGCTCTTTCCGTCG 1958664 35 100.0 42 ................................... AAAATCAAGTACTTACGCGACATTTTATCGGTAAACTGCTGG 1958587 35 100.0 42 ................................... TTCCAGCAGACCACTGGCCGTCTCACGGCCAGTGGTAAGTCC 1958510 35 100.0 36 ................................... AGCTACCCGCTGGCCGGGTGGGCAGCGCCTATGCTG 1958439 35 100.0 41 ................................... GCGTCGGGTGCCCCGACGCAGTCAGGAAAGGCATCAAAAAA 1958363 35 100.0 40 ................................... CCCTGCCAGCGGTAGCTGGCTGTGGAGCGCCAGCTACCGT 1958288 35 100.0 41 ................................... CGCGCTCCCGTTTCGACGGATTCCGGGACTTCCCGGGTTTG 1958212 35 100.0 41 ................................... ATCGTCGGTTTTGGGCTCGTTCTTTTTTGCGGCCTTTCGGG 1958136 35 100.0 42 ................................... GCTATAGTCTAGTGTGAGCCCTTTCCAGCAGACCACTGGCCG 1958059 35 100.0 36 ................................... TTAAACTTTCAGCTAAATTTTTAATTAAATCAATTA 1957988 35 100.0 40 ................................... AAATAGGACAAGCTCGTCCATTAACATGCATTGCTGGAGT 1957913 35 100.0 34 ................................... GCGCTACTTCTACTGAGATTGCTCAGAGAGTACT 1957844 35 100.0 37 ................................... GACGGGAATTCCCGGAAAAATCAAAAGGAACAGGAGC 1957772 35 100.0 42 ................................... GAACTCCCAAATTTTTCCTTTTGAGCGCAAATTTGCGTAAAG 1957695 35 100.0 40 ................................... GCATGCATAAGTATGCGCGCTTGGTCAAGACTCTGGCAGG 1957620 35 100.0 38 ................................... TCCGGATGCGCAATCGCATCCGGAAAAAGCTCAAAAAA 1957547 35 100.0 38 ................................... GTGCAAGTATCCAGCTACTAGTTAATCCTAGTAGCTGG 1957474 35 100.0 37 ................................... AAATTATCCTAGCAATTTGTATCTGGCAGTTTGGATT 1957402 35 100.0 36 ................................... TATGCTGCTTGCTCGAGCAAGCGGCACGCTTGCTCG 1957331 35 100.0 41 ................................... AAGATGGTACAATGTAATGTTTCGCAGCCAATTATAAAATG 1957255 35 100.0 38 ................................... CCAATTACGCGATATGCTGCTTGCTCGAGCAAGCGGCA 1957182 35 100.0 41 ................................... TTACTTTTCGCTAGTAGCTGTTTTTGTCAATAATTCTAAAT 1957106 35 100.0 41 ................................... ATAAGTCCCTTATCCGACATATCAGACCTCCTGCCAGCGGG 1957030 35 100.0 42 ................................... GAGTTTCCAAATTTGGCAGTAATCCTTTTAGGTAGGATACTG 1956953 35 100.0 40 ................................... ACAAGCCCTTGTTCCTTCTCTTGTTCTTTTCGCAATTTTG 1956878 35 100.0 41 ................................... ACGACGGAGCGGGAAGTGACTGTGAGCGCAATAGTATTATT 1956802 35 100.0 36 ................................... CGGGGCAACCGACGGTGTGAGGAAAAGCTTCGAAAA 1956731 35 100.0 40 ................................... GCTCCGGGGAATTCCCGGAGCCCTCGTTCTTTTTCGCGGC 1956656 35 100.0 38 ................................... TTACACGACATGTTGCATTTAGTTCGCCCTCGAACTAT 1956583 35 100.0 36 ................................... TCAGACTCACGTTCCCTTGCGACAGGAATATATACT 1956512 35 100.0 37 ................................... TCCCGGGTGTTCAGTACTATTTCCGAAGCACCCTTAT 1956440 35 100.0 37 ................................... ATAGCATTAATCCAGCATTTCAACCAGCATTATACCA 1956368 35 100.0 42 ................................... GAACCGAAACATGGTTCCCTAACTTGCTTTTCAGGTTTATTC 1956291 35 100.0 39 ................................... CGCATTGCGCTTGGCCAGAATTTTTTGTGCAGTTTTCAT 1956217 35 100.0 38 ................................... CCAGAATTTTTTGTGCAGTTTTCATGTCGTAATTCCTT 1956144 35 100.0 39 ................................... GTCATTTCATGCCAGCAAAGTACTTCTCTTTGCTGGTAT 1956070 35 100.0 33 ................................... CGTAATCCTGTACCCGTGCTACACCTAGCCGGC 1956002 35 97.1 38 ........................A.......... CCCTTCAAGTGGGCTACTGCTTTTTCAAATTCCACTTT 1955929 35 100.0 37 ................................... AGTTCGAAAAACTTCGCTCCCGCGACTTGTCCCGCAA 1955857 35 100.0 41 ................................... CGGGAATTCCCACAACGGGAATTCCCAGAAAAATTATAGAA 1955781 35 100.0 40 ................................... GTTCCTGGCTTTGCTGGTATGTCAAAAATGGCTTTTTCTG 1955706 35 100.0 40 ................................... CCGTGAGTTACGGCCGTCGCAATCCTTTATCTCATGGGGC 1955631 35 100.0 40 ................................... ACAGGTCGGAAAGTTTACGGAGGAATTCCCGCTCACCAGA 1955556 35 100.0 42 ................................... TTGGACAAGCGATGGCCCTCATGGGCCATCGCTCCGATTGTG 1955479 35 100.0 37 ................................... CCTGAACAGTTCCCACAATGGGGAACTTTTCCTCAAA 1955407 35 100.0 39 ................................... GCTTGCTGTAGTGAAACCATGACGCCTCCGCACAAGTGG 1955333 35 100.0 38 ................................... AGAATAATCTAAAGTCATTTCATGCCAGCACAAGACTT 1955260 35 100.0 39 ................................... CCAGGGTGCACCTTGCCAGTTTGGAGTGCAGATTCCAGG 1955186 35 100.0 38 ................................... GTTGGCCTTCGCCCGGGAATTCCCGGGCGTTATCAGAA 1955113 35 100.0 35 ................................... AGGTCGCACAACGCCCGTAGGCGTTGGCCTTCGCC 1955043 35 100.0 39 ................................... GCCTCGGGGGGAACAGCCCCTACTGTAATACGTCGGAAT 1954969 35 100.0 40 ................................... GGTGACGCCGGCACGTGCGGTTACACGCTGGGTCAGTCCG 1954894 35 100.0 41 ................................... CTTAAACCGGCGCATGTTGCGATCGATCTCCTCCGAGCTCA 1954818 35 100.0 33 ................................... GCCGGCGGTTTGCTGGCGGAAGGTGCTCGTCGG 1954750 35 100.0 39 ................................... CAGAAAAGACTGACGCTGTAATCCAGCGTCAGTCCCTTC 1954676 35 100.0 39 ................................... GCAAACATAATTCCCCCTTGCCCCAAGGATTGGGGCCTT 1954602 35 100.0 37 ................................... CCATTTTTCGAAACGGAGGGAGGAATTTGGGTCTTCC 1954530 35 100.0 40 ................................... CAAAGTTACACCCAACCATATAAGCCATCGTATATGTCAG 1954455 35 100.0 38 ................................... TCTTAAGCTGCATCGACTTCTCGTGAGTCTTTTTGTCC 1954382 35 100.0 38 ................................... CCCATGCCGGGAAACGATTGTCCGTGGCATCGGAGACC 1954309 35 100.0 37 ................................... ACCTTAACTGCTTCGATACTCTTCAAAAATTCCTGAC 1954237 35 100.0 41 ................................... GAGGAAGGAAAGGGCTCGATCGAGCCGCGGCCTGGCTACGC 1954161 35 100.0 40 ................................... CTCGAAGAACAGACATTTGTCCCTTGCAGGATCGTAGAAC 1954086 35 100.0 39 ................................... CAAGCTGCTAGCTGTTTAGTGAAAAAATTCTAGCAGCTT 1954012 35 100.0 40 ................................... CCTTATCGGCGACTTGCCCAATAAGGGAAAGGTCAGCCAG 1953937 35 100.0 40 ................................... GTATCCATAGCATCTCCTGTTCTTTGTGGGAATTCCCCGG 1953862 35 100.0 40 ................................... CAATCCCGGCCGCAATCTGCAGCCGGAATTTGCCGGTGTC 1953787 35 100.0 36 ................................... CCATCAAGGGACGCACCTGCAAAACCCGGGGGCTGG 1953716 35 100.0 39 ................................... GATCCCACACCGGATGCCCAAAGCCGTCCCGCCGCTCAA 1953642 35 100.0 37 ................................... CCACAGGCCGCTGTTAAATTTTCCAGCCCAAACTGGC 1953570 35 100.0 36 ................................... CAGACGGAGGGGGGATCCCAGGAGCTCTGGCGGATA 1953499 35 100.0 40 ................................... GGGGTAGGGTCGCTTGGCATCGGTCAAGAAGGCATCAAGC 1953424 35 100.0 42 ................................... TCAACTCGTTGCTCAGCCTGTTCTTCAGGCAGAACAGGGCAT 1953347 35 100.0 38 ................................... GTTCCCCCGACGTAGCCGCTTTTGGTCACGATGTATGG 1953274 35 100.0 36 ................................... GAACACCGCGTGCAGGAGCGCCGCGTCGCTATCCAC 1953203 35 100.0 36 ................................... GTGCGCCATCCTCGTTGTCCCAGCTCAACAGCCGGA 1953132 35 100.0 41 ................................... GGGCGGCAATAATCCGCCGCCCGGCCTGCAGCTCCTCGTAA 1953056 35 100.0 39 ................................... CCATGTTACCCTCCATGGTCTGGTTACTGGTGTCAACTA 1952982 35 100.0 38 ................................... TCCAGTCGAGCATCAACCATGTTTCAATTTTGTTATGC 1952909 35 100.0 36 ................................... CCCCGAATGTTCCAGTACTATTACCGGAGCATCCTT 1952838 35 100.0 38 ................................... CCTTGGGCAATAAGCCCAAGGAAACAAAAACGTCCGTG 1952765 35 100.0 37 ................................... TGTTCAGGTCGCTGGAATTGAAATAACGAGACATAAT 1952693 35 100.0 35 ................................... CAAAATGCCGGGGCGGACTTTTCCGGTCTGGAGGG 1952623 35 100.0 38 ................................... CGGGACTTCCCGGAACCATCCGTCTTGGGCTCGTTCGC 1952550 35 100.0 37 ................................... GCTCATGTCTTATTCCTAACCTTCAGTATTATCTTTA 1952478 35 100.0 42 ................................... CATTTTTAACTGGTACACGATAAAATCTCCTGTGGGAAGGGT 1952401 35 97.1 40 ...............C................... CATTGTGTGAGTCTCTGCTTGGTTAGCTTTGATGCGATCA 1952326 35 100.0 41 ................................... CCAGGGATATATACTTCCTCCATGTCGCAAGAACCACACCG 1952250 35 100.0 39 ................................... ACGACGAATGGACGAGCGGATATATTCCGCCTTGCCAGG 1952176 35 100.0 38 ................................... GAGCGTTGTTGGGGCGGTCATTGTTGCTCTTTACTCTT 1952103 35 100.0 38 ................................... CGACCAAAACAAGTTTTAAATTTTATCGTCAGCATTCT 1952030 35 100.0 37 ................................... GACCTGGAGCGCCAGCTACCCGCTGGCTGGGTGGGCA 1951958 35 100.0 34 ................................... GGTATAACAATAACTGTTTCAAAAACCGGCCGTC 1951889 35 100.0 40 ................................... ATGCCCGTAGGCGTGACGGCTTGGACCTTGTTGACGGTGG 1951814 35 100.0 41 ................................... CTGATTATCCTCAAATACTACCTTGTGACCATCAATTATTG 1951738 35 94.3 0 ...............................G..T | ========== ====== ====== ====== =================================== =========================================== ================== 164 35 99.9 39 GTTTGATATGACCTGACTTGATAAGGGATTACGAC # Left flank : CAACAGGAATGGGGCATTGGCAGGTAAAGATTCCGACAACCTTGCTGGCATTGTCTGGCCGCCCTACCCAGGCTACCCTGGCGAAAAGGGGAAGAGGCGAGGAACGTTGTCCTTTCTTTCTGGAATGCCGGACACGACCTGGATACAATGTCGGCAGGGCAAAGCGCAGTCTCGCTGCAGGCTGCATGGCAGCCTTGCGTGCTGGAGCAATGGCATGGGCAGTACGGGGAGCACTGACCTCGAGACCGCGTCAGCCGAATGAATTGGCCGGGAAGCTCATGGCTCCTGTCTTTGGAGTGAATAACATGCTGATTTTTCGTGATTTTACTTTTTTGAGCGCTGGAGCTTCCCGCGTGCAAAAAAATCCAGTAAAATCAGGCTGTTTGGGTAGAGGCCTCTGTTCAGTCCCTCCATCTGCCCTTCTGCCAGGTTTTCTGCGTCGGAGCTTCCCGGAAACCATCACCCAACACCCTGAAAACACAGAACATTTGGAGGTGACA # Right flank : TATACGCTGGACTGATTAAGCAAAAGTAAGATAGAAAAATATCTTTGTGCAATAATTATAAATTCAGCGGTGCAAAGAGTTTTATGCGCTGAATGAAGCTGTGTTAAAACTCACATTGTGCAAAATCAGAATATTTCTTCTGAAGTGAATGATATAAAAGCTTTATTTGAGAGCAATGATTAGCTCAGGCTGCAGGGACGAGTAATTCTACTTTGTAGAAGAGGTAAATTTTCCTGAATAATACAAGCAGTTTGTATCTCATAAATAAATCATTGTCATATACTTGCCTGCGTGTTAAGCTGTACTATACAGCCCTGCTTTTTCAAGGATGTGTAAATCATAATTCAGGAGGTCCTTATGATTGCCTTTTTCATTATTACAGGTATACTTTTGCTAATTGTTATTTTTTTCTATAGTACAGTATCATTTCTGAACAATATAGTTAAATTTATGCAGAAACACCAAGAGTCTGAAAAAAATATCGATATGAAACAAAGCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGATATGACCTGACTTGATAAGGGATTACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 4 2304436-2303550 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021255.1 Desulfobulbus oralis strain HOT041/ORNL chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 2304435 31 100.0 36 ............................... CCCCTCCGGTACCGGACAAAACCTGGCACGGTCATG 2304368 31 100.0 35 ............................... CCGAAGTGTCAGCGGGGGATGTGCAGCAGGTCTAA 2304302 31 100.0 34 ............................... GCCCCTGTTTCCGCTTTGAAGGATTCCGGGAATT 2304237 31 100.0 35 ............................... GCCGACATTTGTCCAGACCAAAAACGTGCGGGATC 2304171 31 100.0 34 ............................... TCCTGCTGCCGTTTCAGTTCTATATGCTGGCCCA 2304106 31 100.0 36 ............................... AAGAGCTTGCTGACATGCTTCTCGGACAAATCCATC 2304039 31 100.0 34 ............................... TGGGAATTCCCAGAAATGGAAAAATTCCTGCAGG 2303974 31 100.0 35 ............................... TCTCTGGCGCAGGTGGCGCAGATATGCCAGCCATC 2303908 31 100.0 34 ............................... AGTGCTGGGCAAGGGCAACAAAAGACGGGTTGTG 2303843 31 100.0 34 ............................... ATTCAAACCTGCTCATATTGCCTTACAGGATGCA 2303778 31 100.0 36 ............................... AAGGAGATGACTCACAAGCTGGAAAGGTCAAGGGAC 2303711 31 96.8 35 ......T........................ ACAGGCTGCTGATGGTCAGCATGCAGGGTAGGCTG 2303645 31 100.0 34 ............................... CCATGCGTCCGGCTCGAAATTGGCTCCTTGACCA 2303580 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 14 31 99.8 35 GTCGCCCCTTCACAGGGGCGTGAATTGAAAC # Left flank : ACCGCCGCCAGTTTGCTCAAAAAAGGGCTCTTTCCCGCTGCATCGGCCGCACAAAGGGCGGGCTGAACTCCAAACTCCATGCCCTTTGCGACGGCCACGGCAGGCCCCTGGCCATGAAGCTCACGGCAGGCCAGGTAAGCGACTACAAAGGAGCCGCCCTGCTTATGGATGCCATAGATGCTTTGCCCGAGGCCAGGGCGCTGCTGGCGGACCGTGGTTATGACGCCGACTGGTTCCGTGATGCCCTGCGTGCCAGAGGCATTACGCCCTGCATCCCGCCCAGAAGGAGCCGGAAGCGACCCTGCTCGTACGATCAAAATCTGTATAAACAGCGGCACAAGATCGAGATCATGTTTGGCAGGATCAAGGACTGGCGGAGAATAGCCATGCGTTATGACCGCTGCGCACATACCTTCTTTTCAGCTCTATGCCTCGCGGCTTCCGTCATATTCTATCTCGATTAATGAGGCCTGAGCCTAGCATGTACACCGGGGAGACCT # Right flank : ACGGAATTTTATAAGGGCCTGCGTAAGGCAGGCCCTTTCCTTGCAACGAAAAAAACAGGTTAATCAGAACAGCACGTCTTCATCATAATAGCAGCATTTCAGCATCTGCTCCATCTGCTTTTGATTGATGGGCCGCGGGTTGCAGCCGGTGCAGGCATCGGTCAGGGCGTTGGCCGCAATGTCGGAGAGCTTGGCCTGGAACTCGTCTTCCGGCACAATCCCCTTGCCCGCCTCGACCTTCAGACCGCCTTCGCCATAACTCTGAATTGCCATCGGGATGTTCAGTTCCGTGTTGAGTCGACGGCAAAAGCCGATCAAATTATCCACCTTGTCGCACACGGTCGAGCCACCCAGATTGATGGCGTCTGCGATCTGGGCATAACGCAGGGCGATTTCTCGTCGACCCGCGTTGAACTTGATAACCTTGGGCAAATACATGGCATTGGCTGCACCATGGATGATGTGCCCGTTCTTGAAGGCTGCACCGGTCTTGTGGGCCA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTTCACAGGGGCGTGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.30,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA //