Array 1 14220-15650 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUHX01000040.1 Pyramidobacter sp. C12-8 NODE_40_length_16245_cov_751.388_ID_10149, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 14220 28 100.0 33 ............................ AGACGCTCACAATAAGGCGCACTCCGTCGAAAG 14281 28 100.0 33 ............................ CTATGAATACCACCGCTTCACCGGCATGACGCC 14342 28 100.0 33 ............................ TTTGATCGATTATCTGCAGCGGCAGGGGCTCTG 14403 28 100.0 33 ............................ GTCATGGCAGGGCGTGCCCAACACGCGGCGCCG 14464 28 100.0 33 ............................ GATAATGCGGTTCTTGGCGTCCAGTTCGATATC 14525 28 100.0 33 ............................ ACCTGTCCGATCGTCAGCTCTTCCAGTTCGCTG 14586 28 100.0 33 ............................ TAGTCAGAAAAAAAGACAGTTGCCAGCGTTCGG 14647 28 100.0 33 ............................ CACCGACCGCACCACGGAGCACGTCCTCATGGC 14708 28 100.0 33 ............................ TGATGTAATCGCCCGGACAAACGACGTGACCGC 14769 28 100.0 33 ............................ TGCCAAAGATGTTGCGACGACGCTCTCCAACGT 14830 28 100.0 33 ............................ CTGCTGGCCGAGGGCAAACCGCTGCCGGCGAAG 14891 28 100.0 33 ............................ TTTTAGAGCGATTGGTGAGCGAATTGTGAATAG 14952 28 100.0 33 ............................ CCACAAAGCCCCTTCGCCTCGCGGCGAGGGGGC 15013 28 100.0 33 ............................ TCCGGCCGCGGCAATGCCCACGATCGCTGCCAG 15074 28 100.0 33 ............................ CAGCGGTTACCGCGAATGCCATATCAAACAGGA 15135 28 100.0 33 ............................ CAGCGCGGTTACGAGGCGCTGCGCGGGCTACGG 15196 28 96.4 33 ..............C............. TATGGCAAAAGCAAAAAGAGGCGATAGAAAGCG 15257 28 100.0 33 ............................ TGTATCTGGATCGATCTTGTTGATGCACAAATG 15318 28 96.4 33 ..............C............. CATCAACGCCCAAAGCCCGGCGGACGTGAAGAC 15379 28 96.4 33 .......T.................... CGTGACGCTTCGGTACAGGGGGCGCATCGCGGC 15440 28 100.0 33 ............................ TGAGCGAGCTTGAAAAAGCGCAGGCCGCTCTGG 15501 28 100.0 33 ............................ TCCAGTTGATGTTGTTTTCGGAGGCTTCCCGTG 15562 28 92.9 33 ....A.........C............. TTGCCGTTTTCTTCCGCGTTTGTCCTTGATGTA 15623 28 89.3 0 ..............C..........G.T | ========== ====== ====== ====== ============================ ================================= ================== 24 28 98.8 33 CAAACCTCCGCTCATGCGGAGATGGACC # Left flank : GACATCCGTATCTCTGCCGATGGACAGCGCGTTTTTTGCCCGCACTGCAAACATGTTGTTTCCGTCGTAAGAGCGGAGCTCCTTGAGACTCGTTGGCGTTAAAAATATAGGCTTGCCTTGACGGCGAAATGTTATGCGAGAATCGTACGTGGATAGTTGATGAACGCCGTCACGCGTTTGGAAGAAGAAATGGATGACGACAGCTCTAAGTGCAGACGGCCCGTCTTGTAGAAAGAATAGTTGCCCAAATTATGCGGCGGAACATTCAGATAATTTCAGGGCCAGACGACACAGATAACACACAGTGTCTGTCGATATGAACATCGTGTTTCCGAAGGAAGCCCTCCGATGTGCTTTGCGCAAACAGCGCTGCACTTTTTATATATGTGGTGAATGCTGTTGCTGTCCATGGTGCAGATCTGTGCCCTATCGTACGGCGACCAGGAAATTCCTTGGGAACTGCGTTGAAGAGATAAGTTGAACATGATACACACTGAAGA # Right flank : TCCTAAAAGCGACGGCCGCACGTGCGGCCTAACCCTTTGCACATATCCGCCAGTGGTCGTAAGCTATGACTCATCCTTGAACGTTGACGTTGGCACAGATGCCCCTGGCAACGGAAGTGGATCCGCAACCGGGGGCAATTATCACAAGCTCATTTTTGTGAACTTCTCGCTGATGTCTGACGTTCAGGGCTGAAATAATCAATTCATAACCGTCGATGAAGCAAATTAGATGATAATCTCTGATTCGATGCCGTTATTGTCCTTTGCAATTGCCTGCAGGCTCTTTCCCATGGATCCTTAGGTCTCCGCATTCAACAAGTTTTTTTGATCCATGACCTGATCATGAGCTGCATATATTTGTCGAGTTTTTAACTCCCGGTCGAATTGGGGAATTGTTTAGACGTCGTATCTCATAAAATTGACTTCTTTCCAGAGCCTCTGATCGGCCGACTCTTTTTGCCGCTTTTTATGTATTCATCGTAAGCATCTTTGACGACGGT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAACCTCCGCTCATGCGGAGATGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 1 1441-594 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUHX01000032.1 Pyramidobacter sp. C12-8 NODE_32_length_33334_cov_1004.56_ID_10133, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 1440 33 100.0 34 ................................. CGGACGCCTCGCCGAGCAGATTGAGACCTTCTTC 1373 33 100.0 35 ................................. TCCTTTCGTTTTTTTAAAACCCCGTTGAGATCATT 1305 33 100.0 33 ................................. GTCTGGCAGTCGGAAAAGTCAATTACATTGCCA 1239 33 100.0 36 ................................. CGTGGGGCGGACGAATGTATATGCCTGAAACATGAC 1170 33 100.0 35 ................................. ACGGAGCCGGCCGAAGAAGAAGCGAACGAGGGCGC 1102 33 100.0 35 ................................. GTGGCAGGAATCGCGACGCTGCGGGGAATCCCCGT 1034 33 100.0 35 ................................. ATTTTGCAGAATGGAATAATCATTTCACCGTTAAC 966 33 100.0 34 ................................. GGTTTTACGTCAACGCGGCGCGTGCAGCAGCTCG 899 33 100.0 35 ................................. AGAAAGGAGAACAAATAACCATGTCCAACAGAATG 831 33 100.0 36 ................................. ACGCGCGGCGTCAGCGACTACGCCTTTCAGGACAGG 762 33 100.0 34 ................................. GTCGCTTACGCGCTGAATAACCCTCAAAGCGGCG 695 33 100.0 34 ................................. ATGAATCTTAGCATACAGGAAATTGACTGTCAAG 628 33 75.8 0 ...............TGT..T..TC.G.....A | T,T [596,606] ========== ====== ====== ====== ================================= ==================================== ================== 13 33 98.1 35 GTCGCGCTCCGCGAGGAGCGCGTGAATTGAAAC # Left flank : CGTATGACGTCAGCACCGACAGCGCCGGCGGAGCCAAACGCCTGCGCCGCGTCGCCAGGTTGTGCGAGAACCACGGCGCCCGCGTCCAGTTCTCCGTGTTCGAATGCAAACTCGACTGGGCCCAGTGGATTACCCTGAAAGCCCAGCTGATCGCCCAAATCGATCCAGAAGTGGACAGTCTGCGTTTTTACCTCCTCGGCAACAACTGGGAAAAACGAGTGGAACACATAGGCGCGAAGAAAAGTTACAACCCGGAATCGGCACTCATTCTGTAAGCGCGAACCCCAAGCGCGCAAAAATCGGTGATCCGGCAAACGCACGCCCAACCATTCAGCTGTGAAGAAAATTCGTCATACTATTCCCTAGGCCGTCGCGGTTAATGGGAACACGGAAAATCCCTGTAAGATACACTGTGAAAGCCACAAGGAAATAGAGCTTGCGACGAACTTCGCGGGAACGCTTCGAGAAAGCGGGGAAATACCCGTCTCAAAAGTACCACT # Right flank : GTCACCCATAACTGTTCCAAGAAAATGTCACTCTGAGATAATACCGTTCATGAAACAGGAGCGAATGACATTGTCACAAAAGGAACTGGATCGTATCAGGATTATCGGAGCGCTTGTCGAGGGACGCATGACGAACAGGGAGGCGGCGGAAAAGCTGGGGCTCTGTCAACGGCAAATCATCAGGATCAAGAAGAGGTTCGTCGCTCAAGGGGCGGCGGGACTTGTTCACGGCAACCGCGGCAGAACGTCTCGGCGCAGGATCGGAGATGAGGTTCGGGAGTCGGTGCTGAAGGCGTATGAGGAGGTCTATTACGATTTCAACTTCTCTCACTTTGCGGAATGCCTGAACGAACGGGAGGGGATCGGGATCAGTCGTTCGAGTGTCGTCCGCATTCTGAAGGACGAGGGGATCAGGAGCAAGAAGAGTGTGCGGCGGCGGCCGAAGCTTCACCGTTCCCGACCGCGGAAGGTGGCCGCGGGGATGTTGTGGCAGACTGACG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCCGCGAGGAGCGCGTGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : NA // Array 2 32026-33273 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUHX01000032.1 Pyramidobacter sp. C12-8 NODE_32_length_33334_cov_1004.56_ID_10133, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 32026 28 100.0 33 ............................ TAAAGCAGAAATAGATGTTTATCTGGAACTCTC 32087 28 100.0 33 ............................ CCTAATATTTTGCTTTTTGCCCTCACCTTCGTT 32148 28 100.0 33 ............................ TTTCCACTTTGATTTTTCCGCTGTAATCCAAAT 32209 28 100.0 33 ............................ CCCGACGCATTGCAAGAACCGATTTATTGCTCT 32270 28 100.0 33 ............................ CTGGCGCGGCGACTTGTCGGTGGCGTGGCACGC 32331 28 100.0 33 ............................ TGAAGCCCGATCGTGCCGCCGTCGTTCAAACCG 32392 28 100.0 33 ............................ TACGGACAAGGCAAAGCTCGACGGCGTGGCTGC 32453 28 100.0 33 ............................ CGTCAAAGACGGCGTCATCGACTACGCGAGCGC 32514 28 100.0 33 ............................ GATAAGTCAAGCATGTTTAATCCAAATCGGATA 32575 28 100.0 33 ............................ GCCGCGCCACGTGCGCGCCGTCAACGAGGCGTT 32636 28 100.0 33 ............................ CAGTTCCAGCTGGCCGGTGACTTCGCCGCCGCC 32697 28 100.0 33 ............................ TTTATATTTGCACGTCTCGAACATCGGCAAAAA 32758 28 100.0 33 ............................ TTATGTACAACGGCATCAGGCGCGCGGGATATA 32819 28 100.0 33 ............................ TCAAAAAAGGCTTGTCTCACAGAGCCGCTTTAG 32880 28 100.0 33 ............................ GTCGCCGAGGAATGGCTTGAGCGCTACTGCCGG 32941 28 100.0 33 ............................ TCTTCAACATCAGCGATTCAACGCTGAACACCG 33002 28 100.0 33 ............................ TTCTTCGCGCTTCTTGACGGGCTTCGTCAATGA 33063 28 100.0 33 ............................ TATAGGAGAGGGGACGGGGCATGTTGAGCATAT 33124 28 100.0 33 ............................ TCTGTTGGATTGACGCGCGAACAGCTTGCGGAA 33185 28 100.0 33 ............................ TCGCTGTCGGCGAGCCCGTTCCAGCGATGCCCG 33246 28 75.0 0 ..................AT..AAGG.A | ========== ====== ====== ====== ============================ ================================= ================== 21 28 98.8 33 CAAAACCCCGCACATGCGGGGATGAACC # Left flank : ACCGTTGTGATAACTAACAATGTCCCCATGAAGTATCGGGGATTCCTCGCCTCTTGCATGCTAGAGCTGGCTCCGGGCGTCTACAGTCATCCTAAGATGTCCGCCGGAATTCGCCAGCGGATGTGGAGTGTTATGGAAAAGTGGTACAATGAACAAGAGATCGGAAACAGTTCTATTATGCTGATTTGGAGTGATTCCTCCCGATCTGGCGGACAAGGAGTAGAATGTCTTGGAATACCAGTTCGGACTGTTCTCGACTGCGACGGGATCCTGCTGAGTCGCCTCGGCGATCAAGAAACGGAGCAGCAGAAACAACAGCTTCGAAAGATCGTGGATAAAAAATATGAATATTCTGATAAATAGGCGATGCGTCTTTTATGAATAACTCATAGAAATCAATCATATCTATTCTCCTTAACACTTTATATATCAATTAAATGCTGATAAATTACGTTTTAGGAAGATATTAAGACTTGTCCTAATAATGTACAACAGGAAGA # Right flank : AAATTTAATCATAACCACCGGCCGTGCCGGTGGTTTGCACAAGCCCCCTTGGGGCATCTTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAAACCCCGCACATGCGGGGATGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 1 86032-83137 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUHX01000008.1 Pyramidobacter sp. C12-8 NODE_8_length_100434_cov_638.075_ID_10085, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================== ================== 86031 33 100.0 35 ................................. CGAAAAGCGCGAATGCGACGACTGCCACGGCACGG 85963 33 100.0 34 ................................. AGGGAACTATGTGATTACGATGCCAAACAATACT 85896 33 100.0 35 ................................. ATCGTTGTTGACTGCGGCGTCGCAGTAGTCCTTGA 85828 33 100.0 34 ................................. TTTCGTGTGCGCACTCGACAAACCGGTCATCATC 85761 33 100.0 35 ................................. TTTTAGATCATCCTCGCCAAGCCCCGCGAGAAATG 85693 33 100.0 35 ................................. ACATCTCAAAAATCGCTTGTCAGCGTGCTGATGTT 85625 33 100.0 36 ................................. ATGGTCGACAGCGTTGCCGTCAACAAGCAGGAAGCC 85556 33 100.0 36 ................................. GCCATGTTAGCAGTTAACTATTCGACCATGCGGACA 85487 33 100.0 36 ................................. GAGAGCGATGGTTACAACGGCAACGACCTGACGGTC 85418 33 100.0 36 ................................. AAGCTTGCCTGGACGGACAACCCCGCCTGGGTGCTC 85349 33 100.0 35 ................................. TGATCCGCCTCGACCGTGACGCCGCCCGCCTTGAC 85281 33 100.0 34 ................................. TCTGCTATTGAAGCCGCAGCGGCTGGCGCGAATA 85214 33 100.0 36 ................................. CCATTTCCCGTCCTCCACGCAGACCAGCCACTGAAA 85145 33 100.0 36 ................................. TTGGGTATGCGCGGTGGGCAAGCCCGTCGTCGTCGG 85076 33 100.0 37 ................................. CATGAAAGAAGCGACAAGGGAAGGGCAAGCGCGGGGG 85006 33 100.0 35 ................................. TTCCCGTCTTTATCTCGCAATACCTTGCCATTGTC 84938 33 100.0 42 ................................. AATCAAGATCAAAGAGAACACGATCGTAAAACCGAGCGGCGA 84863 33 100.0 35 ................................. AATCGCGCTGACCGCCGCCTCGACCATCGGGGCCG 84795 33 100.0 35 ................................. CTTTGTAAAATACGCATGGCACTTTGCATTCGCCT 84727 33 100.0 34 ................................. ACCTCGCAGACACTGAGCTACAGTCGAACAGTAT 84660 33 100.0 36 ................................. CTCCTTCGAATTGGAGGCTGTGTTATACTATGGTCA 84591 33 100.0 34 ................................. ATCCCGACGCCGGGAAACAAGTTCATCGTCGCCG 84524 33 100.0 36 ................................. CGTCTCCGCGCCGGAGTCGTAGGGCAGCGCCGCCTG 84455 33 100.0 36 ................................. AAGATGTCGTTCTCGGTCGAACTGCACGTCGATCCC 84386 33 100.0 35 ................................. ATCAGCAGGAACGCCGCCCGCGTGCCGAGCACGAC 84318 33 100.0 34 ................................. ATGGAGGACGGGGCGCCTTGCACCGTCCTCTGCG 84251 33 100.0 34 ................................. CGCAGTGCTGATCGTAAACGACGAAAGTCCCGTT 84184 33 100.0 34 ................................. CCCGACCAGGCGGAACGTCGCGCGACTCTTGAAA 84117 33 100.0 35 ................................. GTCAACACCCGCCTGGCGCGCACATGGAACGACGG 84049 33 100.0 35 ................................. CCCGGTAAAGGAGAGTAAATCATATGGCAGGCTTT 83981 33 100.0 35 ................................. ACGACGGCGCGGTCTTGCTGCAGCTCGTCGTAAAC 83913 33 100.0 34 ................................. CCGGACGCGGCAAGCGCGGCGGCGCACGGACAAT 83846 33 100.0 35 ................................. GTGTCAGATTTACATACGTTGACATGGCGTTTCGT 83778 33 100.0 36 ................................. ATCATGAAATGGTACGCGATTTCGTGCACGACGGTT 83709 33 100.0 34 ................................. GTGCGCGTCGCAGACCCCACGGCCATGGGCATCC 83642 33 100.0 35 ................................. CGAAGCGATCCCGCGCGGCGTTCTTTCTTTGATGT 83574 33 100.0 35 ................................. ATCAATACACGATTACAACGTTGCGCCCGGATGTT 83506 33 100.0 34 ................................. AGTCGCCATGAATCGTTATGCAAACGGCATTTAC 83439 33 97.0 34 ....T............................ AAGCAGCTGGAAACCGGCGGCGGCAAGGAACATG 83372 33 100.0 35 ................................. AGGTCTTTGGACGTCAGCGTTTTCGGCTCCTGCTC 83304 33 100.0 34 ................................. AAGGCATTCCGCGAGACGCTTTGACAGATGAAAT 83237 33 100.0 34 ................................. ATCGCCGAAATCGGATTGAACGCAGGAGGGGATC 83170 33 81.8 0 ...A.........CAC.........G.....G. | T [83152] ========== ====== ====== ====== ================================= ========================================== ================== 43 33 99.5 35 GTCGCGCCCCTCGTGGGGCGCGTGAATTGAAAC # Left flank : TCTGTTCGAGCGCGTCGTTTGCAGGAAAAATAATGACGCTTCAACTCCCCGCTCTTTCGGCGATTACTGCGTCATGCTCGACGGACAGCCTCTGACCGAAGTGAAAAAGATCGTCGCCGTCAGCTAAAGAAAAGCTGGCCTCACCATTCAGGACAACGGCGCCGTTCCCCTGAACGTCCTTATGCAAAGAAGGGGGCCTGCCAAAGCGGCAAAATCGCAGCCAGAACGAACCTATCGAAAAAAGTTCCGCTCCAGAGTGAGCTCCGCTCCTGTGAGCGCGAACCTCAAGCGCGCAAAAAACGTTTTCTCCGTAAGCACATGTAAAACCACTCAGTTGCCTGAAAAAACGTAATACAATCTTCGAGGTTGCCGCGCCCCATGGAAATGCAGCGATTCATCTGAAATGGAGTGACAAAAGACGCCATGAAATATGATCTGTGGCGGGCTCCGCGAATATCTCTCCGAAGAAGCAGAGAAATATCAGCATCAAATGTACCACT # Right flank : CCGAGACGCTGGCGAGGGCTCTGGCAAATGCAGTTTCTCCGAGAGATCGTCACCCCGCATCTTCATCGGCAGCTCAGAAGTCTCCTGCAACGCGATGTCTGCAAGCTTGCGCAGACGCCTCGAAGAGCCGATTAAAGGAGCCTGTCTCTTCTCCCTTCTATGGGATTTAGAGACAGGCTCTTCTTTTCGCGCGTTTATACCGGCCTCCGTGAAAAAGGCCGAAGATTTTCTGCCGCTTTTATAGCGCCGAAGGCGCAGCAAAGACTGCATGGAATCGCATGGCGCGCGTTTTTATGCGGCATGGCCGCATAGAGGCACGGCATTTTCAATTGAAGTTTGTGATTGAAGTCAACGTTACTTTGCGGCAGGAGCGGGTTCCTCTTTCTTGTCGGCCATGGAGTCCATCACTTTATCCTTGATTTCTTCGGCTTTCTCGACCGCTTTGTCGGTGAGTTCCGCAGCTTTCTCTTTGACTTCTTCAGCTTTTTCGACGACCTTGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCTCGTGGGGCGCGTGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 88% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.30,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //