Array 1 700-138 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNDN01000006.1 Rhodococcus triatomae strain DSM 44892, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 699 36 100.0 39 .................................... TGGGATCAGCCTTCGCCATGATCACTTCTCTCCTTCGAG 624 36 100.0 41 .................................... CTGCGACCCCAGGTGCGCTCCACCGCCGACAGCCCGGTGGA 547 36 100.0 38 .................................... GGGTATGGGTTCTCACGACGACGTTGCGCTCGATCACC 473 36 100.0 39 .................................... GACGAAAACCCCAGCGGGCAATCCCACCGGGGCTTCATG 398 36 100.0 38 .................................... ACGGCGATCCGGCGCGGCACTATCGCTGACCGGTGGGT 324 36 100.0 37 .................................... CGGATCCTCCGGAACGCGGGGTTGGCGTCGGCTGGGG 251 36 100.0 42 .................................... GCGAAGAGCCTGGGGGTCGCGGTCTCGGCGGACTCGATGTTG 173 36 97.2 0 .......................C............ | ========== ====== ====== ====== ==================================== ========================================== ================== 8 36 99.7 39 GTCGCAGCTCCTTCGGGAGCTGCTCTTCATTGAGGC # Left flank : AGCCCTCGCCTGTCCCGCCTCGTCGAGGGCTCCCGACCGAACACCGAGACGGCTCGGTGACCGCCGTGGAAGGAACCTGGCGAGGGGCCGCGGCGCCCTTCGACAGGTGTTCACTGATCGCCGACCCGCTCTTCTCTCCGGTTGCGTGTCACTGTCGTGGGGCGTGCCCGGTCGAACGGCGGTGCCGATACACGTCGGCATCGGCGTGCACACGCCGGAGCGCGGCGACGACCACGCCCGAGGGTGATCGCGCCTCACCGCGATACCGTCGGCTGCCCCAATCGGACGACCGTCTGTCGCCGAGCCCTGTCGCCGAGTCGTTTCGCGAGCGCTCCACCGGTGTACGATTTCCCGGGGAGCGCTCGCGTCCCATTTCCGCAGGTAGAAGACGAGCACGTGTCGCCCACGCCATTCTCGCACTCGGATTTCGACGGCCGGAGACGGAGCGCTCGCGAGAGGGGTGTTCCGCCGCTGTTCAGAGGGGGTAAATTTGGGGCGCT # Right flank : CTCACGAGACAGCTCGGTCACGCGAGCGGCTGCCCCGTCCGGGCAGGGCTCCGTAGTTGTTGAGGCCCAGGGCCGCGACCTGCGGGTTCAGGATCTCAAGACCAGGTCGACAGCACGATGCGGGTTTACCGCGACACG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGCTCCTTCGGGAGCTGCTCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.80,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 18033-19398 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNDN01000006.1 Rhodococcus triatomae strain DSM 44892, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 18033 36 100.0 39 .................................... GTCGGTCGCATCGTCCGGGTTCGGTCGCGGCACGCCGTC 18108 36 100.0 40 .................................... TGAGCCGACGGACGAGAGTGCGCACCCGCTCGGAATCCAG 18184 36 100.0 37 .................................... CGACACGGCCGCCGTCGGGTCCCTCGCCGCCGAGACG 18257 36 100.0 39 .................................... TCTCGAAGAGTTGGCCGCGGCCCTCGGCGACGACCCGAA 18332 36 100.0 34 .................................... GGTCGTCGGGTCACGTACGGAGGAGCCGAACCCG 18402 36 100.0 37 .................................... GGCATGCCGACGTATCTGCCCGGCGGCCAGGTCGTGG 18475 36 100.0 38 .................................... CAAAAAAATGCCCCCTGTCGGGATGGGGTGCCACGGCC 18549 36 100.0 39 .................................... TTCGATGACCCTGCCCGACTTCGCGATGGAGCACCTGGG 18624 36 100.0 37 .................................... TCGCCGGACGCCTCGGCCTCGAGCATCGCCGACACAC 18697 36 100.0 39 .................................... CCGCAGCCCCGCACCGGACGCCGCCCCCATGCTCACCGA 18772 36 100.0 39 .................................... TGCTCTCCCGCTTCGGCCGGGCGAGGCGACTGGCAGCAG 18847 36 100.0 36 .................................... TCGAGGAACCGCAGCCGGAGGCGGTGGACGTCCCGG 18919 36 100.0 40 .................................... ACCATGGGAGCGCTCCGGCAGGCGTTCATCTACGCCGGTG 18995 36 100.0 38 .................................... GGCGAAACCGTCGCCGACGCCAACGCCGACATGAAGAA 19069 36 100.0 37 .................................... GAATGGTCAAAGTCGTTCGCGGCCATGCAGCGTCACG 19142 36 100.0 38 .................................... ACAGCTCCGGCGTCGTACATCGTGTACGACACGCCGCG 19216 36 100.0 40 .................................... GAGCAGCCCGTCCTCGTCGTGCGAGGCGGGCCGGACGAGG 19292 36 100.0 35 .................................... GGCGAGCACATGCTGCACCACTTCGACGACCACGC 19363 36 94.4 0 ..................................CG | ========== ====== ====== ====== ==================================== ======================================== ================== 19 36 99.7 38 GTCGCACCTCCTTCGGGAGGTGCCCTTCATTGAGGC # Left flank : AAGACGCGATGAGGCGGGACGACACGCGGCGCACGCTGATCGCGTACGACATCCCGGACGACAAGCGCCGGGTGCGACTTGCCAAGCTCCTGTCCAGGTACGGCGATCGCGTGCAGTACAGCGTGTTCGTCGTGGACATCTCGCCGGCTCGGTTGGTTCGTCTCGAACGGGAGATGGATTCGGTCATCGTGCGTTCGGAGGACTCGGTGCTCGTGTGTGATCTCGGCTTGACCGCAACCGTCGAGGACGGCCGATTCAGCTACCTCGGAAGGTCGCGACCGATCACCGACAATTCGTCGATCATCATCTGATTCCGAGGTGTTTCGCGAGCGCTCCGTCGGTGCACGATTTCCTGGGGAGCGCTCGCGTGATGTTTCCGCAGGTAGAGGCCATGTTCGTGCCGAAGAGTAGCCTTGAAGCCCTCAATCGGGGTGCTGAAAGCGGAGTGCTCGCGGGGAGGGTGCTCCGATGCTGGTCAGAGGGGGTAAATTTAGGGTGCT # Right flank : GGAGCGGCCCGCTTGACGCGGCTCGACGTCGATAGCGGGAGGTTCTGGTTGTCCTTGGTTTGGTAGTTTTGACGGGCATTGGCGGTGGGACGAGTGGGGGATATGACCGAATCTGGTGAGGATTGGAAGGCGTTTGCGGAGTCGTGTGCTGCGCACGCGTTCTCGATCGAGCGTGATGGGCTTGTGCGGCTGGTTGCGCTGTGTGATCAGCATGCGGCGGACATGCAGCGGTTCGCGGATCGTGCGAAGGTTGAGCTGTACGTCAACACGTTGGGTATCGGGGAATCTGAGCTCGAGTCCGCCCGTACGTTGACGGCGAAGTTTCAGGACAAGGCGATCGGTGGTGGCAGCATCGCGCACGAGTCGAGTGCGGTGGGGGTGTTCGAGGCGCACCGTGATTGGGCTCGGGCGATGGGTGACAGTTTCCGGGCGGCGTTGCGGCGGTATGAGGAGCAGGATGCGGTGAATGCGGCTGGTTACGGGCAGTGGGGAGATTCGCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCCTTCGGGAGGTGCCCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 36488-34455 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNDN01000006.1 Rhodococcus triatomae strain DSM 44892, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 36487 36 100.0 40 .................................... ACCTCCGTGCGGGTGGCGATGAGACATCGCACCGGGTCGA 36411 36 100.0 36 .................................... CGTCGAGGGCCGCACCGAGGCCGACCACGGTGCCGA 36339 36 100.0 39 .................................... CCCCAAGTCGTGCAGGGTTAAGGCCGTAGAGCCCGCACC 36264 36 100.0 41 .................................... TCGGAATTTGCCCCCAGTGCTGCATGCGCGTGGAGGCCGAT 36187 36 100.0 40 .................................... CGACGGGGGCGGCGGCGCCGTAGCGAAACTTGTTCTCGAC 36111 36 100.0 39 .................................... ACCGCATGGGACGTCCACAGCGACCGCTCCGGCTGGCGT 36036 36 100.0 35 .................................... ATCGCGCACAGGTCCAGGTTCGCGATGAACGCGAT 35965 36 100.0 37 .................................... ACTACCAGGTGACACCCACGCAATTACGCGAACAGTC 35892 36 100.0 39 .................................... ATGAGTCGGGCGGTCGTGCACGCGGGCAGCAGGACCGCA 35817 36 100.0 43 .................................... GCGGAAGAGCACCGGTTCCGTGATGGCGTGTGGGGTGGCCGAA 35738 36 100.0 36 .................................... CGCGAGAACGCCGAGGTGATGCTCGAACAACTCGTC 35666 36 100.0 35 .................................... GTCGATCCCGCCCGCCGCGGCGAAGGCTACTTCCG 35595 36 100.0 37 .................................... GAGATCAGCCGGGCGCTAGGTGAGTCGCTCGTCGACC 35522 36 100.0 39 .................................... GGCTGTCCGATTCGTCTGGTATGAATCCCTCATGACTGC 35447 36 100.0 39 .................................... TGGAGGGCAGGCCATCCTGTCCGGCAACGGCCGAATCCG 35372 36 100.0 38 .................................... CCCGCAAGCCGCGTCGCCGGTCGCCGTCTGGTGACTGG 35298 36 100.0 38 .................................... TGCTTCACTTCCACCAGTCCTTCCCCAGCTTCTCGGCG 35224 36 100.0 35 .................................... GCTCGAGGCGGCGCTGCCGGAGCTCCGTGCGTCGG 35153 36 100.0 37 .................................... TCGGACGCGATGTTGTGGACTTGGGGGCCGGCCGGGT 35080 36 100.0 37 .................................... CCGACGCGCCGAGTGAGCTACCGCAGTAGCGATCGGC 35007 36 100.0 38 .................................... CGGTACGCCGACGACGACAGCGAGGTTCTCTGCCCAGG 34933 36 100.0 37 .................................... GTCAACGGAGCGTACAAGAGTAACGGCCCGGTGTTCG 34860 36 100.0 35 .................................... CGCCACATCGCCCACACGATGAAGCCCACTGCGAT 34789 36 100.0 39 .................................... AGCCACTACGGCAGCCGCGGAATCATCATCATGACGAGT 34714 36 100.0 38 .................................... GAGTGGTCCGACGTCGAGGCCGAGCTCCACGCCGCCGA 34640 36 100.0 38 .................................... CCGTACACCGACGCGGACGGCACACTCGTGCAGGAGGT 34566 36 100.0 40 .................................... ATCCTCGAGGCAGTGGACCCGTGGTCGGATCCGCAGGCCG 34490 36 94.4 0 ............G.C..................... | ========== ====== ====== ====== ==================================== =========================================== ================== 28 36 99.8 38 GTCGCAGCTCCTTCGGGAGCTGCCCTTCATTGAGGC # Left flank : CGCGGTGGAGACGGAGTTCTCCCTGGTTCGCTTCGACGGCGACCAGGATCGCGCCGACAAGGTGTACGAGGGGATCGACCCGCTGGTCGCGGACGACATCGCCGAGATCATCGGATTCGTCGCGTCCCGGCCGCCGCACGTCAACCTGGACCAGATCATCGTCAAGCCGCGCGATCAAGCCGATCCGGGCCGGTTCCACCGGCATTGAGCGACAGCCGGTTCCACCGACTCAAGACTGCTCGGCATCAGTGTCGGAGAAGAGCCGGGGACTTCCCTCGAGTGGCACGGTTCCCTCGACGACAGCGAGCCCAGGAGAACCCCTTTGCGAGCGCTCCGTCAGTGCACAAATCCCCGGGGAGCGCTCGCGCCTCGTTTCCGCAGGTAGAGAGCGCGTACGCGTCGTCCACCCCATTGTGGCCCTCGGATTTCAGCACTCGGAAGCGGAGCGCTCGCGGGAGGGGTGTTCCGCCGCTGGTCAGAGGGGGTAAATTTGAGGCGCT # Right flank : AGCATCGATCCTCGTCGGCACCAACGGCCCTCGCCCCACACAGCAGGCCTTCGCGCAGTCAATGATCCAGGCCCCTGCTGGTATGGTGCGCGCCGGGGAGTTCGGCCGACGTGCAGCGGCCGTCAGCCGTACAGGGAGGGAGCACAACCATGAGCGCAAGCGACGCACCCGCGCCGGGGAGCTGGCAGGCATTTTCCGCCGCAGCCATCGGCAGCGGCCAACTCAGCCTCGACCCGGACAAGATGCGCGAGTGCATCAACTACTGCGACGACTACATCCGCAAGCTCCAGCGATTACAGGACCGAGCGAGCGACGAGCTCTACTACGAGACCCTCGGAATCGGTGAAGCAGACATCGAGACCTCGAGGCTGATCGTGCAGAAATTCCAGCACAAAGCCCGCGGTGGCGGCCAAATCGCAGACGAGAGCTCCGCCGTCGGCTACCTCCAAGCGCACATCAAGTACGCACGCGATCTCCGCGATTCGCTCCAGGCAGTACTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGCTCCTTCGGGAGCTGCCCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.80,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 76-344 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNDN01000018.1 Rhodococcus triatomae strain DSM 44892, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 76 28 64.3 33 .ACT.TG...G..CCCT........... CCGTAATCTGGCTCATCATGTCCCTGTTTCTCC 137 28 100.0 33 ............................ CGAGGTGGAGCTACGCGTCCGTTCCGAAGGCTT 198 28 92.9 31 ............G.C............. CGGCTTGTAATGCGTGCACTGCGTGCACTGC 257 28 82.1 33 ....A.TG..T...C............. CAGCGCCGGTGGGCTTGCGGGTCTTGATCGCGG 318 27 78.6 0 ..........T.G.C......-....TT | ========== ====== ====== ====== ============================ ================================= ================== 5 28 83.6 33 GTGCTCCCCGCGCATGCGGGGATGAGCC # Left flank : GAGAACCGCCGCGATCAGACACCATGGTCGCGATCCTCAACGCCCCATCGATCTACTCATGACCAGCTGAAATGCG # Right flank : TGACCTCGGACAGCCTGCCGACGTGTCCCACCAGGACGCGGAGGTCAGGCATACGGGCGTACGTCTGGACATACTCCATTTTAGTTGAACGTCCGACTTTTTCTTTCGTTTCCTATGTCTTCTGGACGTCTGTTCGGTAGAACTGCTAATTAGCAGCACTCGCGATTCCGCGAGCGCCGACGACGAGCCGATCCGGAGGGCGACAGCCGACAGGGCGAAACCGCGACACCGAACGTCGGCCACGGATGGGCCGCAACTGAATCGACACCGACGCGCGGTGAGTGCGGCGGTAGAGCCTTGCCTCCACGATCCGCGGTGCGGGTGGAGCGCCTCGTCGTGTTCGAACAACCAATCAGCCCCGAACTGCATCAAAAGTGTTGCAGCGGAACTTGTTCGGATTCCCTTCCAAAGTTGAACCATCAATGATTCAATGTGACCGGCAACACGGCACAATCTGATTGTGTTGCACGACACGACAATTACGAGGAGAACCGATGGGA # Questionable array : NO Score: 3.29 # Score Detail : 1:0, 2:3, 3:0, 4:0.24, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCATGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-14.10,-14.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 76815-77592 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNDN01000018.1 Rhodococcus triatomae strain DSM 44892, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 76815 36 86.1 37 ...A.G.G..TC........................ CCCCGAACGAGAGGGTCGGCTGGTGTTCGCTGGTCGT G,AT [76818,76829] 76891 36 100.0 39 .................................... TTCGGTCTCCCTCGTCACCCGCACCGTGTCCGCGAGCGG 76966 36 100.0 37 .................................... TCGAGCAGCTCGTCGGGCCGGTGAAGTGATGGACGAG 77039 36 100.0 36 .................................... CGCCGCCTGGTCGGTCCTCAACGCGAACCCCTACTC 77111 36 97.2 43 ...............................A.... TGGGAACATCCGTGCCTGGGATGACCCCGACGGAATCGGGCGC 77190 36 100.0 36 .................................... GCCAGCGGCGACGACGTCACCGCCTCGATCTGCCGG 77262 36 100.0 36 .................................... GGTGGGGAGGTGGGAGGCGATGCCAGAGGGGAGGCC 77334 36 100.0 38 .................................... CGCCAGTCGGCACGAGCACGCTCTGTGCGTCTCAGAAG 77408 36 97.2 36 ...C................................ TTCTGGCCGATCCATTGTGCGCGGCCTCCAATTCCC 77480 36 100.0 41 .................................... GACGCATACGCCGACGAACTCGAAGCGGCTGGTTTTACCAT 77557 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================== ================== 11 36 98.2 38 GCCTCAATGAAGGGCAGCTCCCGAAGGAGCTGCGAC # Left flank : TACTGCCTGGAGCGAATCGCGGAGATCGGTGGCATACCTGATGTGGGCGCCGAGGTAGCCGACGGCGGAGCTCTCGTCTGCGATTTGGCCGCCGCCGCGGGCTTTGTGCTGGAATTTCTGCACGATCAGCCTCGAGGTCTCGATGTCTGCTTCACCGATTCCGAGGGTCTCGTAGTAGAGCTCGTCGCTCGCTCGGTCCTGTAATCGCTGGAGCTTGCGGATGTAGTCGTCGCAGTAGTTGATGCACTCGCGCATCTTGTCCGGGTCGAGGCTGAGTTGGCCGCTGCCGATGGCTGCGGCGGAAAATTCCTGCCAGCTCCCCGGCGCGGGTGCGTCGCTTGCGCTCATGGTTGTGCTCCCTCCCTGTACGGCTGACGGCCGCTGCACGTCGGCCGAACTCCCCGGCGCGCACCATACCAGCAGGGGCCTGGATCGTTGACTGCGCGAAGGCCTGCAGTCTGGGGCGCCGCATGAACTGAGGCGGGGCGAAGGCCGTTGGT # Right flank : CCGGACGGGCAGGGCTCCGTAGTTGTTGAGTAGCGGAGCTGTGGCCTGGTGGTTTGGGTTCGTTGGAGCGTGTGGGGGCGGTGGAGCGGGCATGGGGACAGGGG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGAAGGGCAGCTCCCGAAGGAGCTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.80,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //