Array 1 7243-9507 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCUK01000065.1 Moraxella lacunata NBRC 102154, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 7243 36 100.0 27 .................................... TTCCTTTTTTGGCTCAAGATAATCACA 7306 36 100.0 27 .................................... ATGAAGTGGTTACCCACTGCTACTTGA 7369 36 100.0 29 .................................... CCATTGTTTCCCCAATCATGTTAGCAATG 7434 36 100.0 27 .................................... CTGTACTGACGGTACGCCAATCCTGCA 7497 36 100.0 27 .................................... AAAAGCCCCAAATCAATGCAGGTGGAT 7560 36 100.0 27 .................................... GTGTGGATGATTTGATAATCATCAAAG 7623 36 100.0 28 .................................... ATCAGTTTCTTCATCAATGGTAACTGGT 7687 36 100.0 28 .................................... ACAAATATCCGTGCTTTGATGGGTGCAA 7751 36 100.0 27 .................................... GTATTGCTTGTTATGGGTGCTATTATA 7814 36 100.0 27 .................................... GTGAGTGTAAAGAGCTTGGCACGTAAA 7877 36 100.0 28 .................................... AGGTAATTGTTTACACCTGTAACCGTTG 7941 36 100.0 30 .................................... ACAGATAATCCATATAGTCCAAGAGTTCGC 8007 36 100.0 26 .................................... ACCAATACGCCAGCATATCAAGCATA 8069 36 100.0 29 .................................... AAGGTTAAATGGCTAGTTTTTGATGTAGA 8134 36 100.0 25 .................................... CGGCTTGCGTCCCCTTGTAGCTTAA 8195 36 100.0 28 .................................... GGGCGAACGACTAGATAGCCCAAATCGT 8259 36 100.0 28 .................................... TAAAGGACTGTGTAGGTTTGTCCACGAT 8323 36 100.0 29 .................................... TAAATCACCCTTGGGTAAGATTGGCACCT 8388 36 100.0 27 .................................... TAATGCATACAGGCGTAATGGGTTGAA 8451 36 100.0 26 .................................... ATACTTTTACCCCCCCCCTGAAAGCC 8513 36 100.0 28 .................................... GTGTAAATCTCTTTTTATGTAGTTCTAC 8577 36 100.0 30 .................................... ATTGTTGCAATCGCTTATTTGATTGGTGCT 8643 36 100.0 30 .................................... AAGCTCAACCAATTCACGATACACGCACCA 8709 36 100.0 26 .................................... TGCGGTGTTGGTTTTCACCCTTTACC 8771 36 100.0 26 .................................... TGCGGTGTTAGCCATTGCCACCGAGC 8833 36 100.0 28 .................................... ATGATGATAAGATTCTACTGGATATCTT 8897 36 100.0 27 .................................... CACCTCTTCTGGCAAGGCATTGTCGGC 8960 36 100.0 28 .................................... AAAAGTATTTTCGCTACAATCACTCGCC 9024 36 100.0 34 .................................... AGCAAGCGTTAAAACGATATTTTTTCAGTCGTTA 9094 36 100.0 28 .................................... TTTTAGTTCGTCTTGATTGGATAATAGC 9158 36 100.0 27 .................................... GCTTCTGTGCTTGTTGGCTTTGCCGTT 9221 36 100.0 26 .................................... ATTCAAATGGATAAAATTATGAAAAC 9283 36 100.0 26 .................................... TTAAATTATGTTGCTATGGCTCATTG 9345 36 100.0 28 .................................... GGGGGCAATGCCCTGCTCCTGTTACTCA 9409 36 100.0 27 .................................... AAGTGAAAACCAAAGGTAAGCTAAAAG 9472 36 91.7 0 .................................TTG | ========== ====== ====== ====== ==================================== ================================== ================== 36 36 99.8 28 GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Left flank : TGGTTTTGATGTTGCCAAATTTTGACATACAAGCAAATGGAGAAGATGTATGATAATCGTCAGTTATGACATCAGTGATAATAAAGTGCGTGGACGATTTGCCAAATTTTTAATGCAATATGGCGACAGGTTGCAATATTCGGTCTATGAAATTCAAAACAGCGAACGCATTTTAAACATCATCACCGAAAAAATAAAAGCAGAATTTGAGTCTTTATTTACAGGAGCGGATAGCGTCATTATCTTTCGGTTTACAGAACGTGAAGTATTAAGATTTGGTCATGCCAAACATCGTAATGAGGATTTGTTAATTTTATAAAAATCCTTGGCAAAAATGATGAGGTTTGTTATAATAAGAGATCTAAATCACACCCAAATGTTTACTTTACAAACCTAAGTCTTAATGTGTGATTTATCATGTTTTGGCGGTAAAAATGATGATTTTTTGTACAAAAAACTTGCTAATTTCTCAAAAAATCATTAAAAATACCCCAAAACGG # Right flank : GGCGTTTAAGATGATTAACCCCACTGCCTGTCCCGAAACGCTACTGCCGTGTCTTTGGCTTTTTTGATGGCAAGTTTGCGGTTATGACTGGCGAAGAGCTTTAACTGCCACAGTTTTTCTTGGTATAAGGTCAGATGGTCGCTTGGGTGCATGCGATTGATAAGGCGTTTGCTCGCCAGTACCGCATCAGGTGAGCGAGTGGCAATCTCATCGGCTAGGGCTTTGGCACGTGTCATCGGTTCATCATCGAGATGGGTGATGAGTCCGTAGTTGTAAGCGGTCTGGGCGTCAAGTAGGCGGGCAGACATGGCAAGCTCTTTTAGCCTATCCTTACCGATGTCTTTGGCAAGACGGGTCAGCCCCATGTCAGCGACCAGTCCCCATTTGGCTTCAAGTACCGACCATGTCGCCGATGGGTGGCTGATACGCACATCCGCCCCCATGGCAAGCTGTAACCCCGCCCCAAGGCACACGCCATTAACCACGGCAATCACTGGCAC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 4617-3508 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCUK01000094.1 Moraxella lacunata NBRC 102154, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4616 28 100.0 32 ............................ AATTATCACTGGGTTTGTTTTGGACGGGATTA 4556 28 100.0 32 ............................ AATACAGGAATGGCATCGCCTTGATTGTAACC 4496 28 100.0 32 ............................ AACAATGCTTTGCAATTATTCACGCACAATGA 4436 28 100.0 32 ............................ TGTTCTTGTTCCTGCTCTTTATTGGCGACATC 4376 28 100.0 32 ............................ ATTATCCGCCTTTACGCAAATGCCAATATCAG 4316 28 100.0 32 ............................ AACTGGGGCAAACCCTACAAGCGATAACCCCT 4256 28 100.0 32 ............................ ATTCTTGGGCTTTACAGAGCGTATATCCACGT 4196 28 100.0 32 ............................ CTTACCGAGTGATGACCGTTGAGCAGTATTTA 4136 28 100.0 32 ............................ TATCGGTCGGTCGGTCGGAACGGTCTGGGGGA 4076 28 100.0 32 ............................ AAGGTTGATTTGTGCCATTCTGACACAGTGAT 4016 28 100.0 32 ............................ TAGTCCGCAGGCGTTGGCGTACTCATTAGCAA 3956 28 100.0 32 ............................ AGACGGTGGCAACAACCCCAAACACATGCAAG 3896 28 100.0 32 ............................ GTTTTTAACAACAACGTTTTTTGCCCAAATGT 3836 28 100.0 32 ............................ GTTAAATATGACTGCGTCGGTGTCATCGAGTG 3776 28 100.0 33 ............................ GAGAAACCGTCATAATATCAATAAAATATAAAT 3715 28 100.0 32 ............................ TACATAACGACCCACCAGTTTGATATTGGTGT 3655 28 100.0 32 ............................ ACCAGCTCACGTACAATCATCTCGTAGTGGTC 3595 28 100.0 32 ............................ AAGCAGTTCCATGACGGTCATCGCCACCGCCA 3535 28 85.7 0 ..C........T.C..........A... | ========== ====== ====== ====== ============================ ================================= ================== 19 28 99.2 32 GTTCCTTATCGCATAGATAACTTAGAAA # Left flank : CGATAGCGGACGTGGGCGAGCGTGCGACAGGCTATGTGGTGGTAGAACGCCAACAGCGAGCGGATTTACAAAAACAAGCCGAGCGATTTGCCGAGTTTAAAAATCTGACGGTGGAGCAGGCGTTGGAGCATTGTTTGGCGTACAAAAAACAGCCAAAGGCGTATCCGTTTATTGAACTGTTTAGCCAAACCAATCAAGTGCCGTATCGGCTGTATGTCAAACAAACGGTCGTGGATAAGGCGGTGGACGGCGAGTTTACGGTCTATGGCATGCACAATCAAGGCGGAGCGATGACGGATAAGGCAACTGTTCCGCATTGGTGATTGAGTTTGATTGTGCTAAAATAAGGGGTATGATACAGGTTTATACTCTTTATTTTTTGACTATTTAAAAACTTGTTAACAATCAATCACTTATAAAAAGGCAAAAAAGCATTGGGTAAATGCCCAAAATATGGCTTTAAGTCTTGATATAAGTGGGTTTTATGTTGTATAATTCTA # Right flank : TTGTATTGAGCTGTAATTGCAATACAACCCAATACAATCCCCACCACACAGATAGCTTACAAGGCAAAAAAATGCTATAATAACCCACATTTTTCAAAGAATTAGGCGTATGCCAAAGGATTTTTATGAGCGAGCAACTTCCTACCAACGACTACAATGCCAGTAGCGTGCGAGTTTTGCGTGGACTAGAAGCGGTGCGAGTCCGCCCTGGTATGTACATTGGCGACACCGATGACGGTTCGGGCTTGCACCACATGGTGTTTGAGGTGGTGGATAACGCCATTGACGAGGCACTCGCTGGGCATTGCGATGAAGTGCTGGTTACCATTCATGCCGATGAGTCGGTGTCGGTCATGGACAACGGACGGGGCATTCCTGTGGACATTCACCCCGAGGAGGGTGTGTCGGCAGCCGAGGTCATCATGACGGTGCTTCACGCAGGGGGTAAGTTTGATGACAACAACTACAAGGTCTCAGGCGGTCTGCATGGCGTGGGCGTG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCTTATCGCATAGATAACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 13087-12398 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCUK01000010.1 Moraxella lacunata NBRC 102154, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 13086 28 100.0 32 ............................ AGTATTTTGATGCCTTTATGAAAGAGAACCGC 13026 28 100.0 32 ............................ ACGCCTATGCCGACCAAATAGGGGCAACAGCA 12966 28 100.0 33 ............................ ATAATCTGACAATTATAATTAGCGGCAGATTCT 12905 28 100.0 32 ............................ TGATTACGACATCAGACGCACTGACCCAATGC 12845 28 100.0 32 ............................ AAAACATATGTTTGCGTTGAACCGAAAGGCAA 12785 28 100.0 33 ............................ CACAACCACAGCCAAGCCCACAGCCAAGCCCAA 12724 28 100.0 32 ............................ TCAGACGTCAAGACCCCATGTTACAAGTAAGG 12664 28 100.0 32 ............................ ATTTTTATCGCCTTATATTTTGGCTATTCTTA 12604 28 100.0 32 ............................ TGCTAGGGCAATGGCATCATCGCCTGTTAATG 12544 28 100.0 32 ............................ AAATCAAAAATTTTGAAAAAAGGTATTGGCAA 12484 28 96.4 32 ...........T................ ACTCTCGGCATTGGCGACCCACTTGGTATTTT 12424 27 82.1 0 .C........A..C......T...-... | ========== ====== ====== ====== ============================ ================================= ================== 12 28 98.2 32 GTTCCTTATCGCATAGATAACTTAGAAA # Left flank : TTTGGCAGGTGTGCCGTATATCGTGGTGCTAACCAATCCTGTCTATGGTGGGGTAACCGCAAGCCTTGCCATGCTGGGCGATGTGCATATCAGTGAGCCAAAGGCAATGATTGGCTTTGCAGGTAAGCGTGTGATTGAGCAGACCGTGCGTGAAGTGCTTGATGAGCCGTTCCAACGTGCCGAATTTTTGCTAGACAAAGGTGCAGTGGATATGGTGGTACACCGCCATGAGCTTGTGGATACGGTGTATCGACTGCTTACCAAGATGATGAAATTGCCGAATGTGGGTTGATTTTATAAACCGTCCTTTGGGGCGGTTTTTTGTCGCCAAAATTTATGCTAAAATGCGAATGTGGTAAAGGTTTATACCCTTTATTTTTTGATTATTTAAAAACTTAATAAAAATCAAACATTTATAAAAAGGCGAAAAACCATTGGGTAAATGCCTAAAAATTGGTTCTACGCCTTGATATAAATGGGTTTTATGTTGTATAATTCTA # Right flank : CCACAAAACCACCCCAAAATTCCATTTGAAAAAATCCCCAAAATCATGCACAATACCTCAAATTTTTAACACCAAAAACACCCATGAACACCCCCCAAACCATCTCCGAATGGCTCAATTATATGGGCAATATTCACGTCTCCGCCATTGATATGGGGCTTGACCGTGTGCTACCTGTCGCCCAAGCGTTGGGCGTATTAAAAGACGACTTGCCACACCGCCCTTATGTGTTCACAGTCGCAGGCACCAATGGCAAAGGGTCGACTACCGCTCTCATCAGCGAGATTTGCACCCAAGCTGGCTACAAAACCGCCCTGTATCAATCGCCCCATTTAGTTAGTTTTAACGAACGCATTAAAATCAATGGGACAGATATTAATGATGAATTATTGATAAAAGCCTTTAACGCCTGTGAAAAAGCACGCACGGACTGCCATGTTTCTTTATCATTTTTTGAAATGACGACATTATCGGCATTTTGGATTTTTAAAGAATTAAAG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCTTATCGCATAGATAACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //