Array 1 73711-71168 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGDN01000074.1 Acinetobacter baumannii strain ARLG-1905 PR323_NODE_12.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 73710 28 100.0 32 ............................ GTTCATTTCTAATGCACAGTAAAAATTGAAGA 73650 28 100.0 32 ............................ TGCAACGGCTTACCATCACCAGTAGTCTTATA 73590 28 100.0 32 ............................ AGTAGTCTTATAAAAAATGTTGCGGTCCATCG 73530 28 100.0 32 ............................ TAAATATGATCCTAACGCTGTGGCTCCGCCAA 73470 28 100.0 32 ............................ AAGAATTACCTTCTCAGAGCTAGTCATTTGAC 73410 28 100.0 32 ............................ TTTTGCTCTACTTGTAGCAATTTAGTTTTAAA 73350 28 100.0 32 ............................ AATCCTATAAAATTTAAAAGTGTTGATTTTAT 73290 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 73230 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 73170 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 73110 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 73050 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 72990 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 72930 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 72870 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 72810 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 72750 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 72690 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 72630 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 72570 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 72510 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 72450 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 72390 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 72330 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 72270 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 72210 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 72150 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 72090 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 72030 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 71970 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 71910 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 71850 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 71790 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 71730 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 71670 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 71610 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 71550 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 71490 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 71430 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 71370 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 71315 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 71255 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 71194 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 43 28 98.7 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : GAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGCA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 78801-83390 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGDN01000074.1 Acinetobacter baumannii strain ARLG-1905 PR323_NODE_12.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 78801 28 100.0 32 ............................ TTTAACCCACTGTTGTAAATCTGGATCTGACA 78861 28 100.0 32 ............................ CATCGGTCGATGTAGATGGTAATGCATACCGA 78921 28 100.0 32 ............................ TGAGCCTCAAACAATTACCGTTCTTGGGGTTA 78981 28 100.0 32 ............................ CATTGTTGTTGATCTAACATTGGGTGAATTAA 79041 28 100.0 32 ............................ AACCTTCAGCACCAACAGTAGTCGCATTTGCA 79101 28 100.0 32 ............................ AAAGCTCATATTTGAAGTTGCACGGGCGATAT 79161 28 100.0 32 ............................ AAGCGGATTGTAAGTGGTGCTACATCAATTTA 79221 28 100.0 32 ............................ TCAGGATGGTTTGCATTCTTAACAGGATGCTT 79281 28 100.0 32 ............................ AGTGAGAAGATTATGCAGTCTCACGGGGCTTT 79341 28 100.0 32 ............................ AAGCTGCTCAAGCTGCTATCGAATTTCCTAAA 79401 28 100.0 32 ............................ TTAATCGGCTGTAGATTTTTATTGATCAGAAT 79461 28 100.0 32 ............................ TTACATGGGTACAAGTTGGTTTTCTAGGATTA 79521 28 100.0 32 ............................ ACATCGTGCAAAATAGTCCCCTGTTGAGTGTA 79581 28 100.0 32 ............................ CATTTCCCACCATGCGAACATGCGTGTAACCA 79641 28 100.0 32 ............................ TAACGAGCATGGTTTAGATTTAAGAGATGGTA 79701 28 100.0 32 ............................ TTTTGAACTTGTGCATTCTCAATGATTGTTTT 79761 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 79821 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 79881 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 79941 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 80001 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 80061 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 80121 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 80181 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 80241 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 80301 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 80361 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 80421 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 80481 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 80541 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 80601 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 80661 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 80721 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 80783 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 80843 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 80903 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 80963 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 81023 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 81083 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 81143 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 81203 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 81263 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 81323 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 81383 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 81443 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 81503 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 81563 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 81623 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 81683 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 81743 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 81803 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 81863 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 81923 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 81983 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 82043 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 82103 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 82163 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 82223 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 82283 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 82343 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 82403 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 82463 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 82523 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 82583 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 82643 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 82703 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 82763 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 82823 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 82883 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 82943 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 83003 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 83063 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 83123 28 89.3 32 ....T.......AT.............. ATCATCAATAAGTTGGCCTTGATTTAAATAGT 83183 28 89.3 32 ....T.......AT.............. AGATACAAACGAGTTCGCATCTCGACCAGAAG 83243 28 89.3 32 ....T.......AT.............. ATTATCCAGATAAAACCATATCTACAAAGTGG 83303 28 89.3 32 ....T.......AT.............. TCAACCTGAACACAGACATACATGTTCTATTG 83363 28 78.6 0 ...GC.......AT..........AT.. | ========== ====== ====== ====== ============================ ================================== ================== 77 28 95.0 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : ATTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTA # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.82, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //