Array 1 1214209-1214664 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBL01000001.1 Streptomyces griseocarneus strain JCM 4580 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1214209 29 100.0 32 ............................. AACGACGCCAAGTACGCGAGGGCGCGTGAGCA 1214270 29 100.0 32 ............................. CCGTCGCGCGGGCGGGGAACTGGCTCGCCGAC 1214331 29 86.2 32 ...................G......CTA GCACAGCAGACCATGACCGAGGACCTGTACGA 1214392 29 93.1 32 ..........................C.A GTGCAGGTGGTGGCCCGTGTCGGGGCCCCACG 1214453 29 96.6 32 ..........................C.. CCCTGACGCTCGGACTGCCAGCCCGAGTAAAT 1214514 29 86.2 32 ...AG............A........C.. CGGCGGCGCCAGTTGTCGACGGCGGCCCGGCC 1214575 29 82.8 32 ...AG...T....G............C.. GGCGAGATGGCTCAGGCGCTCCACGATTCGAA 1214636 29 86.2 0 ...AA.....................CA. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 91.4 32 GTGCTCTCCGCGCAGGCGGAGGTGAGTCG # Left flank : CCGGCGCCGTCCTGAACGACCGGATCACCGAAGACGACTACCGCGAAATCTGGCGCCGCCGCGGCCAGATAATCTGACTCGCTGGAAACGATCTTCAGTCGGAGGGTGGGGCAACAGGTGGATGTGCTGCGCGAGGAATACCGCGAATCTACCAGCACCTTCAAACCCGCTTCACCACTGGGGATCTCGCCCCGGCGCCGGTGATACCTTCCGCACAGTTCGACTGAGCGCCCTCGGTCGTGCGATGAAAGTGATCACTCGTCTGTCCAGCACCGACCCGAAGGCCGCTGCTGGCCACACCCTTGCTCTGGCCCGGGCATGCAGCACCCTGCTCAAGTTCTACCCCGAGGCCCCGTGATTCCCTCGGAGCGGCGGGCGAGACCGTGGAGAATGCCGCCGTGTTCTGAACGGGTGATCGTCGTGTTCAATGGAGAAGTGTTCCGCTCCGAGCCTTGTGTCAAGAAACAGCAAAGGCATGACAACGTTGCAGGTCGCGAAGA # Right flank : GCGAGCGCTGGAGCAGCGAATCGTTGTAGAGGCCGCGACCGTTCCCCCTGGGAGCCAGGGTCTAGCCAACCGAGCTGGGGGCTGCGGCCCTCCGTACGGTTTGGTATACCTCGCTGTGGTCGCCGGTGATGGTGGCGAGCATAGGCAGCAGCTCGGTGGCAAGTGAACGCCGCTCAGCCGAGTCGGTGACGCCCCTCCAGTGCTGCACTGCCCGATCTGCCGAGGCCCGGGTGATCTCGTGCGCGGCGCCCCACACCTGCATCTGCAGGCCGGTGGTGTGCAGGTACCAGCGGGCGGCCACTGCCGGCTGGTCCATCAGGTGAGCGATCCACCCGCGCAGCTCCCGAACTTGGACCGTGTAGGAGTGCGAGGCTCCGTACAAGGCGGTGAACTCCTCATCCAGCTTCTCTGCCTCGAGGTTCGCCGAGGCGAGGCGCTGCGCGTCGACGGGCGGCGCGAATGCGGCGGTGACCGCCGTGATGCGCTGCTGGTACTCCGCA # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCAGGCGGAGGTGAGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGGAGGCGGAGGTGAGCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.90,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1334300-1333293 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBL01000001.1 Streptomyces griseocarneus strain JCM 4580 sequence01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1334299 29 100.0 32 ............................. CTGCGCCCCACCATCACGAAATGGGCGGCCGG 1334238 29 96.6 32 ............................A TATTGCCCGACGTGTCATAGAGCCGGAAACCG 1334177 29 100.0 32 ............................. TACGTGACCGGCGTGAGCGGCTGGACGATCAA 1334116 29 96.6 32 ............................T TCGCCGATCTCGTCATCAGGTCGTCCGACGGT 1334055 29 100.0 32 ............................. TTGCCGGTAGCTGCTTGGCGTTGAGTCGATCG 1333994 29 100.0 32 ............................. ACGACGGCCTCGAGGTGGCCGAGTGCCTCGTG 1333933 29 100.0 32 ............................. TGATAGCGCTTCAGCCGCTCGATCGCATACCG 1333872 29 100.0 32 ............................. TGGACAGGTACATGTAGGATGAACTTAAAAAA 1333811 29 100.0 32 ............................. GCGTCGAGCCGATCGAGTTCGCCATGCACAGG 1333750 29 100.0 32 ............................. TCCCAGGGCATGCTCTACCACCTGACCGGCTC 1333689 29 100.0 32 ............................. GCTCGGGCGCTCCTACGCCGACGCACTCGGCT 1333628 29 96.6 32 ...................C......... CCGATGGACGACACCACCACCGCACGGCGCGT 1333567 29 96.6 32 .........A................... TGGGTCGCCCACCAGATGTAGACCCCGAGCGC 1333506 29 100.0 34 ............................. TCCCCGCCGGCCGCACCGGCGGGGCCTGCGCCAT 1333443 29 100.0 32 ............................. CCAAGAGGAGCTACCTGACCGGCCAGGACCGC 1333382 29 100.0 32 ............................. AGCCGGAAGTCCTCATATCGGGTGACGGCGGC 1333321 29 96.6 0 ....A........................ | ========== ====== ====== ====== ============================= ================================== ================== 17 29 99.0 32 GTGGTCCCCGCGCCTGCGGGGGTGGTCCC # Left flank : GGAGGAGCCCATCTGGTGACCGTCATCGTCCTCGCCAACTGCCCCGCAGGCCTGCGCGGATTCCTCACCCGCTGGCTCCTCGAAATCTCCCCCGGCGTCTTCCTCGGCTCTCCCACCACCCGCGTACGCGACATCCTCTGGGAAGAGGTCCGCCAGTACCGCGGCAAAGGCCGGGCCCTGCTCGCCTACCAGACCAACAACGAACAAGGCTTTGCCTTCGCCACCCATGAACACGCCTGGCACCCCACCGACCACGAAGGCCTCGTCCTCCTCCACCGCCCCTCCCCACAGGCACCCCCCACGGCTGGGAGCAAACCACCGAGCCCGCCGCGCCAAGGTTGGAGCAAGGCAGCGAAGCGACGGCGCTTCGGAAGTCGGTAGGAGGGCCACCCCATGCGCTCCCGGCTGGCGCCCAAGCATTCAACGGTCTCAATATGTCCGTTTCGCAAGAAGCGATCGAAATCCATTCCCTGCCCGCCTAAAAGCCCAGCTCACGGCTT # Right flank : GCGATGTCCTCGTAGAAGCCGAGGGCCTCGGGGTGGTCTCCGGCGCCGTCTGCAGAGACAGCTCCCGTTCGGAAACCGCCCGGAAACCGTGCGGTGGGCGGCGGCCGGTGAGGCGCTGGATGGTGTCGGTCGAGCGGTCCTCCGCTCACACCGAGTTGACGAAGCTCTCGCCGCTCACGCGGCGGGCTGAGCGCAAAGATTCGCTTGGCGGCCGAGGGCGGCCTGCGGCCACTTGCCCTGCTGATCACGCCGCCGGGGCACTGGGGCGCCGCCCCGCGAATGGTCCCCGTCCTGCACCGGATCCGTGTGCCGCGCCCCCGGGCCATCCAAGTGGAGACACACGTCTTTCACGGCACGGTGACCCGCGCCGCGGTCCCGGCTCTGGCTCCGGCCGTGATCTGTCCGGCGATACCTGCCGTTGCACGGGGTGGCTGCCGCCCCGATGCCCGGACAGGGCACCCCACATGACGCCCCATATGATGGGCTGCAACCCGTCGGGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCCTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1346810-1344755 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBL01000001.1 Streptomyces griseocarneus strain JCM 4580 sequence01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 1346809 29 100.0 34 ............................. CTGCGCATGACCTCCGAGGAGAAGCGGATTGTGT 1346746 29 100.0 32 ............................. GCGACGGTCACCACGCCCCCGGGCCTGGGTGC 1346685 29 100.0 32 ............................. GGTGAGGGCACACAACCGCGCCGCCGCACCTG 1346624 29 100.0 32 ............................. TTTGCCGACCTGATCACTGATGTTGTGGCGGT 1346563 29 100.0 32 ............................. CCGTTTGTTGGGATCATGGGCTGGGTCATGCT 1346502 29 100.0 32 ............................. GCCGGGTGCTCCGGAGTTCAACCGATCCCCTT 1346441 29 100.0 32 ............................. GATTCGGGCATATGTCGACTCCATCAGCACAA 1346380 29 100.0 32 ............................. CGGGCTCCGCCGGCGCCTCGTCAGCCGACGCG 1346319 29 100.0 32 ............................. GAGGGCAAGACCATCGGTGAACCGCGGACCTT 1346258 29 100.0 32 ............................. GACCAGTGCCCACGGGGGCCGGGGGTCGGCCG 1346197 29 100.0 32 ............................. CTCTCCTCTTCGAGGTCCGCGTACAGGTCGAG 1346136 29 100.0 32 ............................. GACGGGGGCCGCTCCCGAAACGCGGGCGGCTG 1346075 29 100.0 32 ............................. GCCCGGCTGGCGCCAACCAGTCGATGTTCCAG 1346014 29 96.6 32 ............................G TCATGGGGATCATCCCGGCGCGCCGGGCGCGG 1345953 29 100.0 32 ............................. GACACGGGGCCTGCCCTGTTTGCTGACGGCTT 1345892 29 100.0 32 ............................. TGGCTCGCCGACCCCACGAACTGGGTGCGCAT 1345831 29 96.6 32 ....................A........ CCGGCGTAGGCGACGGACGGGGCCTTCCTCCG 1345770 29 100.0 32 ............................. CACGCGAAGCCCCTCGGGCGTATCCCCCACGA 1345709 29 100.0 33 ............................. CGTGGACACGGAGTCCGACCAGTGAAGCACGCG 1345647 29 100.0 32 ............................. ATGGCTGCGGTCTGGATGCCCTGCCAGGCGGC 1345586 29 100.0 32 ............................. GTCTGTGGATCCCACGCTTCGTTCTTGTTCTT 1345525 29 100.0 32 ............................. CCTATGATCCTTGCCGAAGACCCCGTTGGGGG 1345464 29 100.0 32 ............................. GCGACGCGGTCCGTGCCGAGCTCGAGCAGCAC 1345403 29 100.0 32 ............................. GACCCGCGCATCCTCGAGGTGACCGTCGACCT 1345342 29 93.1 32 .....................A..A.... GGGATCGGGTCGGACTGAACCTGGGCTCGAGG 1345281 29 96.6 32 ............................G CGCGGCCCCACGACGCTATCGCCCAGAAACAG 1345220 29 100.0 32 ............................. CGAGGACCCGTACGGCAGACGCACCAGCTCCG 1345159 29 100.0 32 ............................. AGGACGCCGTCGGCGACGATGCCGGTGCCGGA 1345098 29 100.0 32 ............................. GGGGCGCCGGAGAACATCCACGGGGGGTTCGC 1345037 29 100.0 32 ............................. AGCGACGGCACGGTGGTCACGGCGGACGGCAT 1344976 29 100.0 32 ............................. CAGTACTCCGAGTTGCGCGGGGCCATGAACCA 1344915 29 82.8 42 ......................G..GAGG CGGTGGTCTCACGATGCGTCCGTCGATACGATCCGTCACACA 1344844 29 96.6 32 .........................C... TGGGGAACCGCACCACCGCTGTCGCGGAAAAT 1344783 29 72.4 0 ...C....T...T........T...GAGT | ========== ====== ====== ====== ============================= ========================================== ================== 34 29 98.1 32 GTGGTCCCCGCGCCTGCGGGGGTGGTCCC # Left flank : CGGCGTAGAGCAACCAGCTCGCGGGCGCTGAGTTTCGGCATCCTGTGCCTGCCGCGGCTACTCCGTACGGGCGCGCCCCAGTGTGCCGGCCACGCCGACCACCGCCACGGCCAAAGCCGCCCATGCCGCCCCTACATCAGCGCCTTCATGTCTGGTAAAGGCGGTCCGTATGCACAACACGGCCCTTCCCCAGGTCCCACACTACGATCTGCACCTTGAAGCGGACGGGCTTACGGAGGCTGCCGCAAGCGCAATAATCGGTGCGCGCAGCAACTTGACGTCAGGGTGTTCACCTCCATGCCTCAAGCCAACCCTAGGCGCCTGGCGCCGTTCGCCGACGCGACGAATGGATGCAAGGGATGTACGGTCCACATCTTCGCCACGACACATGCCCCACGCACTCTTTTCCAAGATCCAGTCAACCAGCCGACAGAATGTCCGTTTCTCCAGAAGCAACGTGTTTCCGCGCCCTGGCTGGGTGAATCCCCAGTTCACGGCCT # Right flank : GCTTCTGTCACTTCTCGGGCCGTAGGTGGATGCAGTCTGTTGTGCTCCAGAAGCAGCTACGCACCCTTCCGCCTACAGAATCAACTGGGGCATCGCTCCTCCACCAACTCCCGCAAACAAGCCCGCACTTGATCTTGCGGTAGTGTCCACGTCTCCGGCTCCACAGGAGCTGGGGCGCACCAACGCAAACGGCCGACCCCGTGCACTCCCCTCGCAAGGAAACAGCACGGACCCGGCCTGTCCCGACCGCTCATCACGATCAAAGACAGGAGCAGTCTACCTGTGGGTACCAATGACACAGCACCTCCCGTACCAGAGCCGTCGCCGTTACCCCGCTGGCACGCTCTACTGCCGGCCGTCATTACCGCTTGTCCTGCCACCCCCTCCCCGAACGCACCCTGGGTGTGGGTGATCGTCGTGCTGATCGCGATCCTGTCGCTGCAGTCCAAGAAGTCGAAGCAGCGCTTCGCCTGACAGAACCGGTGCGGGAGCGCTCAGGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCCTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //