Array 1 87446-85774 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSVU01000004.1 Ligilactobacillus salivarius strain FGDLZ35_2.scaf Scaffold4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 87445 36 100.0 30 .................................... CTATAATTCCATCAACTAGCAACCTGGAAG 87379 36 100.0 30 .................................... TGATGTAGTCAAAAGTGCCTATATCAATAG 87313 36 100.0 30 .................................... AATCTAAATTGTCAGGTAGCTGCCTGACAA 87247 36 100.0 30 .................................... GCTTACAATTGAAAGGTGGTGAACTCACAA 87181 36 100.0 30 .................................... AAATGGCTATGAAACGTAAAAAACTACCAA 87115 36 100.0 30 .................................... TCCTAAGAATGGATTATATGTTCGCTATAA 87049 36 100.0 30 .................................... TAAAGCACAAGTTAGTTCACTGATTAAGGC 86983 36 100.0 30 .................................... GGAGTTATCGTTAAAGCTACACAAGGCACG 86917 36 100.0 30 .................................... CTTTATTCAGTGCATGCACCCAGTAAAGCT 86851 36 100.0 30 .................................... CAGCAAAGTTCAAGAAGCAGTTGCGAGCGT 86785 36 100.0 30 .................................... AATAAATATGGATATTGCACAGCAAGCAAT 86719 36 100.0 30 .................................... CAATTTGTCGAAATTTTCTTTAATCTTTTT 86653 36 100.0 30 .................................... TCCACCAATAATCATTTCACTTAAGCCATC 86587 36 100.0 30 .................................... ATACCGCCAATAGTTAAAACTGTATTTACA 86521 36 100.0 30 .................................... AAGGAAAGTTATTTATGGTGTGACTAATCA 86455 36 100.0 30 .................................... TAAGGTAGTTGTTGATTACAAGACAGACGG 86389 36 100.0 30 .................................... TAGCAGTGCTGGCCAAATTCGAGTAAACAT 86323 36 100.0 30 .................................... TGTTCAAAACGCAATAGATGCAGCCATCAA 86257 36 100.0 30 .................................... CGATAAGATTGCAGAAATTACTAACTTGAT 86191 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 86125 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 86059 36 86.1 29 ..........T.........T...A......G.C.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC T [86025] 85993 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 85875 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 85809 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 25 36 97.8 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : TAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAACT # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //