Array 1 117197-118914 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031771.1 Lactiplantibacillus plantarum subsp. plantarum strain E1 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================ ================== 117197 36 100.0 30 .................................... TCTGTTGTTTAATTTGTTTTAGATTGTTAC 117263 36 100.0 30 .................................... ACNNNNNNNNNNNNNNNNNNNNNNNNAGAA 117329 36 100.0 30 .................................... AAAATAGTTCGACGAAAAAGCCGAAAGAGA 117395 36 100.0 30 .................................... GCGGCCACGACCGCCATGGGTGTCAGCGCC 117461 36 100.0 30 .................................... TCGGATAACTTAGCGGCGGCGTATCCCTGC 117527 36 100.0 30 .................................... ATAGTGACAGCATCTGTTTTCGGACCAATC 117593 36 100.0 30 .................................... GAGGCTTGCACTAGTGAGTTCAATCGTTAT 117659 36 100.0 30 .................................... TGTCCATACGAGCAGCGTTGGCACTTATTC 117725 36 100.0 30 .................................... GTATTATTATCAACGTCCCGCATTGCGTTA 117791 36 100.0 30 .................................... AGGATATATGAAATTAGTACATGTACTAGT 117857 36 100.0 30 .................................... ACGTCTTTCAGCCCAGTAAACTGCTCAAGT 117923 36 100.0 30 .................................... TNNNNNNNNNNNNNNNNNNNNNNNNNNATC 117989 36 97.2 30 ...................................N NNNNNNNNNNNNNNNNNNNNNNNNNNNNGT 118055 36 100.0 30 .................................... GGCCGGGTTAATCTTAATGTTTTATGTTCT 118121 36 100.0 30 .................................... CAATCAGAAAGAAGATGACGACTATAATGC 118187 36 100.0 30 .................................... GACTTATACCAGCAGTACCGAAGACGGTTA 118253 36 100.0 30 .................................... AACTGGGAGCGGTCAACACCCCAGGCTGTG 118319 36 97.2 30 .............T...................... NNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 118385 36 100.0 30 .................................... GTNNNNNNNNNNNNNNNNNNNNNNNNNNNA 118451 36 100.0 60 .................................... CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC 118547 36 97.2 30 ...................................N NNNNNNNNNNNNNNNNNNNNNNNNNNNNTT 118613 36 97.2 30 .............K...................... GTGACGTGCTCCCATGTGACCCGAATTGAC 118679 36 100.0 30 .................................... CGACTCTAATGGATATTTTCAATCATAGCA 118745 36 97.2 30 ........................T........... GATGGTGCTGTTGCACGTGATCCCGCGCTT 118811 36 94.4 30 .......................G...........T AGCATAATGTATTATGTAACATATTATGTT 118877 36 75.0 0 ..........ACG.C..C.........T..C.C..T | AA [118898] ========== ====== ====== ====== ==================================== ============================================================ ================== 26 36 98.3 31 GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Left flank : GTGATATGAATTAATGAGTAAATGATGTTAAAATGCTGGTCTTGAATAGTAGTCATATCAAACAGGTTTAGAACAAAATGGATTTCTGAGCATTACTGTCCGACGTCTTGAATAGTAGTCATATCAAACAGGTTTAGAACGANNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCTTGAATAGTAGTCATATCAAACAGGTTTAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGTCTTGAATAGTAGTCATATCAAACAGGTTTAGAACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTTGAATAGTAGTCATATCAAACAGGTTTAGAACAAAATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGAGGTCTTGAATAGTAGTCATATCAAACAGGTTTAGAACTTAGGTTGAGCTGGATCGGGATCAGGATCG # Right flank : TACTAAAAAAGGCTCACCAACTAAAACAGGTTGGTGAGCCTTTTCGATTTATTGACTAATTACTAATCAATCACGCCATCTTTTCCCATCCATCGGAACCGAATAAACTTCCCGACCTCGGTCACAATCAAGACGACGATCCCACAGATAATCGGGATGCCCCAACCATACCAGAAGTTGATGCTAGTCGTATGGAAGACGGATTGCATGAATGGTAGGTAAATGATTCCCAGTTGTAAGAGAATCAGAATACCAATGATGTAGAACGCCATCTTATTTTGGAAGAAGTACTTGGAAATGACGGGGTGGTCATTCCGCAAGTTGAAGAGGTAGAAAATCTTACCAAAGATGATGATGTTCAGTGACATGGTACTACCGACGACATTTGGTAATCCAAGTGCGGTCAAGTAGTTGTAGGCGAAGATCCCCAAGCCAGAAATTAGGAAGGAGACATAGCCGATTTCAAAGTAATCTAATTTTGACAACAACCCAGACTTAAC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //